FFCP PHASE1:Hg19::chr10:75757646..75757653,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7414 | |EntrezGene=7414 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12665 | |HGNC=12665 | ||
|TSSclassifier=strong | |||
|UniProt=P18206,B3KXA2 | |UniProt=P18206,B3KXA2 | ||
|association_with_transcript=-218bp_to_ENST00000211998,ENST00000372755,NM_003373,NM_014000,uc001jwd.2,uc001jwe.2,uc010qky.1,uc010qkz.1_5end | |association_with_transcript=-218bp_to_ENST00000211998,ENST00000372755,NM_003373,NM_014000,uc001jwd.2,uc001jwe.2,uc010qky.1,uc010qkz.1_5end | ||
|cluster_id=chr10:75757646..75757653,+ | |||
|description=CAGE_peak_3_at_VCL_5end | |description=CAGE_peak_3_at_VCL_5end | ||
|id=chr10:75757646..75757653,+ | |id=chr10:75757646..75757653,+ | ||
|ontology_enrichment_celltype=CL:0000055!4.63e-09!180;CL:0000548!4.98e-08!679;CL:0000004!4.98e-08!679;CL:0000255!4.98e-08!679;CL:0000012!6.05e-08!682 | |ontology_enrichment_celltype=CL:0000055!4.63e-09!180;CL:0000548!4.98e-08!679;CL:0000004!4.98e-08!679;CL:0000255!4.98e-08!679;CL:0000012!6.05e-08!682 | ||
|ontology_enrichment_celltype_v019=CL:0000349;5.25e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.93e-09,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.83e-09!143;UBERON:0000468!3.97e-09!659;UBERON:0002100!6.38e-09!216;UBERON:0000486!1.04e-08!82;UBERON:0000926!1.57e-08!448;UBERON:0004120!1.57e-08!448;UBERON:0006603!1.57e-08!448;UBERON:0004923!1.65e-08!57;UBERON:0000914!4.39e-08!83;UBERON:0002329!4.39e-08!83;UBERON:0003077!4.39e-08!83;UBERON:0003059!4.39e-08!83;UBERON:0007282!4.39e-08!83;UBERON:0009618!4.39e-08!83;UBERON:0007285!4.39e-08!83;UBERON:0000467!4.49e-07!625;UBERON:0000480!5.00e-07!626 | |ontology_enrichment_uberon=UBERON:0005256!1.83e-09!143;UBERON:0000468!3.97e-09!659;UBERON:0002100!6.38e-09!216;UBERON:0000486!1.04e-08!82;UBERON:0000926!1.57e-08!448;UBERON:0004120!1.57e-08!448;UBERON:0006603!1.57e-08!448;UBERON:0004923!1.65e-08!57;UBERON:0000914!4.39e-08!83;UBERON:0002329!4.39e-08!83;UBERON:0003077!4.39e-08!83;UBERON:0003059!4.39e-08!83;UBERON:0007282!4.39e-08!83;UBERON:0009618!4.39e-08!83;UBERON:0007285!4.39e-08!83;UBERON:0000467!4.49e-07!625;UBERON:0000480!5.00e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0010371;9.38e-08;31!UBERON:0005631;1.44e-07;10!UBERON:0000158;1.44e-07;10!UBERON:0004923;2.90e-07;55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004923,1.56e-09,66;UBERON:0005631,4.48e-09,14;UBERON:0000158,4.48e-09,14 | |||
|phase1_expression=0.908391896352783,2.99740733447376,1.83240725324762,2.00146596706261,1.78784437770915,0.872338524100369,0,0.631719873426831,0.522371256399677,0,0,1.96597234917155,1.58260186937072,1.98026164736075,1.32558950291166,0.672325146451775,1.20538905604795,0,0.487932798790507,5.17108443922509,4.48801520737357,1.88072832886853,1.71741592278634,3.42186062682211,1.63205431473244,0,0.0821005894499457,0,0.786728553697808,0,0,0.919421224478927,0.6024118375565,0.369754010166788,0,0,0.293600439334847,0,0.200544447470142,0,0,0,0,0.436194716338694,0.377875943688809,0.242584061187816,0.232429036905685,0,2.78735733805593,0,0.256160706529101,1.18241114944293,0,0,2.70852973188684,0.376484679085209,0.545812300115692,0.449446968890169,0.306083892370903,1.60464513538047,0.639337125799041,0.329851300186716,0.199463657621632,0,0.870627715885752,2.26954089876456,1.24564449799115,2.26123798731069,0,0.65156653411535,1.21079900526674,1.10483290796269,1.58231193720442,0,0,0,0.112328631146495,0,0,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,2.64342657158052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0,0,0,1.02290049474824,1.80719576192283,0,0.289693037921647,2.3858578411533,0.486634870302636,4.91581049253153,3.99112915432615,4.3917392846563,0.458426764241994,0.364295288292542,0,3.57002133020152,5.04976238167875,1.32957960518865,0.238490624305342,0,0.371457501329565,0.39752481473341,0,0,2.26123176769604,0.419499436209906,0,0.626984899610432,0.516833518338658,0.35576626268671,0.33472061276467,1.20848795132744,0,0,0.367663080345869,0,0.267899184852239,0.44905874525234,0.225222960966644,0,0,0.183201743930407,0,0,0,0.496971951695318,0.506522046658319,0.529636723252875,0.286836620748814,0.709336764396714,0.560677600142307,0,0,2.8008993185979,0,0.490385709340376,1.51357427644931,1.15235184896,0.468642863667593,2.18512053781224,1.1409436430889,0.448346041655403,0.469737994575059,1.13311061057692,2.24721290723598,1.02077085627447,1.35117749042945,0.619954687054593,0,0.989067717114227,0.910161361938026,0.718618141816238,0.673344455816265,1.12606667884768,1.10825646193673,0,0,0.751190294532984,1.13432183160021,1.07633781413317,2.13557388818567,0.635795703478686,0.600182192168805,1.23663035086127,0.515281080091258,1.30281799432113,1.0126579934476,1.07180705677318,0.504867548488229,0.920498986422993,1.13152239773168,1.06502877754984,1.91428986632517,0.508681776931463,5.02478218224572,4.63668405004419,5.16248271700207,1.21973706129595,0.927708378250397,1.04574548582567,1.24393266018445,1.00928340350251,1.09493207722749,4.69348596989448,5.78916844373597,2.76269842704961,1.39310378409594,3.60939740834793,0.354920400119532,0,0.241011029883482,0.441175890929576,0.217879444092406,0.71181185733329,0.404493924480493,0,0.38474715694639,0.738155454624648,0,2.057870056657,2.94017422771084,0,2.94848165003288,0,0,0.245976877086227,3.43135620597051,3.62175941848464,0,0.804231779293047,0.648119116109707,0,0,7.21656710126366,0.927443239800615,0.821860859650752,0.577465791044295,0,0.190254152234598,0.790204397959275,0.858486162094873,0.246217006087397,0.936017060556951,0.891786973732369,1.87467667973554,3.52762469217605,3.82792762554443,0.358234090811393,0.871901815541886,0.766765358330422,0,0,0.414656231081544,0.144119953416961,0.37872730027914,0.317489471460845,0.381988425558278,0,0,0.102827492703324,0,0,2.91540819297938,0.43596006883328,2.0534720029866,2.06834745212444,0,1.690605505112,5.05282421511254,2.08014873822732,0.514414748524284,0,0,2.28764789853036,0.542621605391443,0,0,1.06617584622764,0.791951872933429,0.904318131178758,0.871533458600294,1.19967589418468,0,0,0,1.19812427745791,1.14861935834114,0,1.30303176000821,0.821905290201534,1.43248770591916,0,0,0.215627574859517,0.256686072559497,0.254094624222463,0,0,0,0,0,0,0.828831026872071,1.2269149171914,0,0.813795071099207,1.03985430765404,0.356857977594324,0.630809660135739,0.819989904948992,2.10662269809403,0,0,0.664225598535437,0.737476674166813,2.25897397617015,0.391602314925481,0.343143423810856,0.413536052245775,0.215714200818617,0.106727557803444,3.94065842880137,1.66435439510497,1.5119514666484,1.98486246255021,0.306923946576125,0,1.53766979106841,0.511707249066704,1.60853921143608,0,0,0.887808626565635,0.821271560138091,0,0.464841513839837,0.241718899183244,2.20557117333613,0.0920809889358963,1.37777337797528,1.63882051206045,0.262248829918848,1.35359883872224,1.5403067420883,0.784349769176855,0,1.26661954671451,1.13733384070897,0.340187410553031,1.29549549661284,1.54227252690289,0.541892875087706,0,1.01950509218015,3.3243040357149,1.34324852833307,0,0.261435451024901,2.3080511260475,1.64007322849853,0.325378394664303,0.515205058238611,0.27470839445503,0.247528499761764,0,0,0,0.870036464629098,0.770243085573222,0.614014698904518,0.689182862422653,0.322260734604821,1.0151168573996,1.10794615640931,0.979352392114111,0.330569830721956,0.384380134730212,0,0.10115778085555,0.464845549297286,0.6296246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| ||
|short_description=p3@VCL | |short_description=p3@VCL | ||
}} | }} |
Latest revision as of 08:17, 19 September 2015
Short description: | p3@VCL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VCL_5end |
Coexpression cluster: | NA |
Association with transcript: | -218bp_to_ENST00000211998, ENST00000372755, NM_003373, NM_014000, uc001jwd.2, uc001jwe.2, uc010qky.1, uc010qkz.1_5end |
EntrezGene: | VCL |
HGNC: | 12665 |
UniProt: | P18206B3KXA2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.93e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
organ component layer | 1.56e-09 | 66 |
extraembryonic membrane | 4.48e-09 | 14 |
membranous layer | 4.48e-09 | 14 |