FFCP PHASE1:Hg19::chr19:50143268..50143279,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:50143268..50143279,-
|short_description=p3@RRAS
|description=CAGE_peak_3_at_RRAS_5end
|association_with_transcript=75bp_to_AF493920,BT006805,CR541944,CR54...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6237 | |EntrezGene=6237 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10447 | |HGNC=10447 | ||
|TSSclassifier=strong | |||
|UniProt=P10301 | |UniProt=P10301 | ||
|association_with_transcript=75bp_to_AF493920,BT006805,CR541944,CR541967_5end | |||
|cluster_id=chr19:50143268..50143279,- | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_3_at_RRAS_5end | |||
|id=chr19:50143268..50143279,- | |||
|ontology_enrichment_celltype=CL:0000222!3.99e-23!119;CL:0000055!2.04e-22!180;CL:0000220!7.30e-22!246;CL:0002321!3.04e-21!248;CL:0000183!4.74e-15!59;CL:0000057!4.32e-14!75;CL:0000680!8.73e-13!57;CL:0000056!8.73e-13!57;CL:0000355!8.73e-13!57;CL:0002371!1.05e-12!591;CL:0000144!1.15e-12!625;CL:0000187!1.38e-12!54;CL:0000192!3.40e-11!42;CL:0000514!3.40e-11!42;CL:0000393!7.50e-11!60;CL:0000211!7.50e-11!60;CL:0000548!4.57e-10!679;CL:0000004!4.57e-10!679;CL:0000255!4.57e-10!679;CL:0000359!5.22e-10!32;CL:0000213!5.69e-10!57;CL:0000215!5.69e-10!57;CL:0000012!2.62e-09!682;CL:0002078!1.82e-08!44;CL:0000115!3.40e-08!35;CL:0002494!2.06e-07!16;CL:0002139!2.28e-07!24;CL:0000066!3.56e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0000359;4.29e-10;32!CL:0000192;1.19e-08;43!CL:0000187;4.21e-08;55!CL:0002494;5.54e-08;16!CL:0000115;1.59e-07;36!CL:0002139;1.74e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.06e-25,121;CL:0002321,2.70e-20,250;CL:0000680,2.49e-14,58;CL:0000056,2.49e-14,58;CL:0000355,2.49e-14,58;CL:0000057,2.56e-14,76;CL:0000187,4.10e-14,55;CL:0000192,2.14e-12,43;CL:0000514,2.14e-12,43;CL:0000393,4.45e-11,61;CL:0000211,4.45e-11,61;CL:0000359,7.89e-11,32;CL:0000213,2.80e-10,58;CL:0000215,2.80e-10,58;CL:0002078,1.02e-08,45;CL:0000115,1.29e-08,36;CL:0002494,5.53e-08,16;CL:0002139,1.49e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000514;1.19e-08;43!CL:0000355;6.19e-08;58!CL:0000222;4.57e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!6.55e-23!79;UBERON:0007798!6.55e-23!79;UBERON:0004872!6.49e-21!84;UBERON:0003914!1.36e-18!118;UBERON:0000055!1.44e-18!69;UBERON:0004535!6.79e-17!110;UBERON:0001009!8.47e-17!113;UBERON:0000119!1.15e-16!312;UBERON:0001981!1.48e-16!60;UBERON:0007500!1.48e-16!60;UBERON:0004537!1.48e-16!60;UBERON:0006965!1.48e-16!60;UBERON:0000475!1.94e-16!365;UBERON:0000483!1.34e-15!309;UBERON:0000468!5.10e-15!659;UBERON:0002100!7.05e-15!216;UBERON:0000486!8.39e-15!82;UBERON:0000914!5.98e-14!83;UBERON:0002329!5.98e-14!83;UBERON:0003077!5.98e-14!83;UBERON:0003059!5.98e-14!83;UBERON:0007282!5.98e-14!83;UBERON:0009618!5.98e-14!83;UBERON:0007285!5.98e-14!83;UBERON:0005256!1.02e-13!143;UBERON:0001637!1.12e-13!42;UBERON:0003509!1.12e-13!42;UBERON:0004572!1.12e-13!42;UBERON:0004290!1.42e-12!70;UBERON:0000467!2.60e-12!625;UBERON:0000480!3.66e-12!626;UBERON:0000477!4.43e-12!286;UBERON:0000481!7.03e-12!347;UBERON:0000490!1.68e-11!138;UBERON:0001134!1.85e-11!61;UBERON:0002036!1.85e-11!61;UBERON:0003082!1.85e-11!61;UBERON:0002385!7.37e-11!63;UBERON:0001015!7.37e-11!63;UBERON:0000383!7.37e-11!63;UBERON:0003104!9.54e-11!238;UBERON:0009142!9.54e-11!238;UBERON:0004111!1.33e-10!241;UBERON:0004573!1.18e-09!33;UBERON:0004571!1.18e-09!33;UBERON:0002050!7.72e-09!605;UBERON:0005423!7.72e-09!605;UBERON:0000923!8.40e-09!604;UBERON:0005291!8.40e-09!604;UBERON:0006598!8.40e-09!604;UBERON:0002532!8.40e-09!604;UBERON:0000025!1.20e-08!194;UBERON:0003103!2.52e-08!69;UBERON:0000922!3.48e-08!612;UBERON:0000926!1.44e-07!448;UBERON:0004120!1.44e-07!448;UBERON:0006603!1.44e-07!448;UBERON:0003102!5.41e-07!95;UBERON:0000948!8.78e-07!24;UBERON:0005498!8.78e-07!24;UBERON:0004140!8.78e-07!24;UBERON:0009881!8.78e-07!24;UBERON:0004141!8.78e-07!24;UBERON:0003084!8.78e-07!24;UBERON:0007005!8.78e-07!24;UBERON:0004139!8.78e-07!24;UBERON:0004291!8.78e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.63e-11;42!UBERON:0003509;6.63e-11;42!UBERON:0004572;6.63e-11;42!UBERON:0002049;5.46e-10;75!UBERON:0007798;5.46e-10;75!UBERON:0007500;1.01e-09;56!UBERON:0001981;1.01e-09;56!UBERON:0004537;1.01e-09;56!UBERON:0004573;2.34e-09;33!UBERON:0004571;2.34e-09;33!UBERON:0000055;4.31e-09;65!UBERON:0003914;5.19e-09;74!UBERON:0010371;9.67e-07;31!UBERON:0000947;9.67e-07;21!UBERON:0010191;9.67e-07;21 | |||
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| ||
|short_description=p3@RRAS | |||
}} | }} |
Latest revision as of 08:21, 19 September 2015
Short description: | p3@RRAS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RRAS_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 75bp_to_AF493920, BT006805, CR541944, CR541967_5end |
EntrezGene: | RRAS |
HGNC: | 10447 |
UniProt: | P10301 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.06e-25 | 121 |
embryonic cell | 2.70e-20 | 250 |
muscle precursor cell | 2.49e-14 | 58 |
myoblast | 2.49e-14 | 58 |
multi-potent skeletal muscle stem cell | 2.49e-14 | 58 |
fibroblast | 2.56e-14 | 76 |
muscle cell | 4.10e-14 | 55 |
smooth muscle cell | 2.14e-12 | 43 |
smooth muscle myoblast | 2.14e-12 | 43 |
electrically responsive cell | 4.45e-11 | 61 |
electrically active cell | 4.45e-11 | 61 |
vascular associated smooth muscle cell | 7.89e-11 | 32 |
lining cell | 2.80e-10 | 58 |
barrier cell | 2.80e-10 | 58 |
meso-epithelial cell | 1.02e-08 | 45 |
endothelial cell | 1.29e-08 | 36 |
cardiocyte | 5.53e-08 | 16 |
endothelial cell of vascular tree | 1.49e-07 | 24 |