FFCP PHASE1:Hg19::chr14:23445892..23445897,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84962 | |EntrezGene=84962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20250 | |HGNC=20250 | ||
|TSSclassifier=strong | |||
|UniProt=G3V5F5 | |UniProt=G3V5F5 | ||
|association_with_transcript=115bp_to_ENST00000553911_5end | |association_with_transcript=115bp_to_ENST00000553911_5end | ||
|cluster_id=chr14:23445892..23445897,- | |||
|coexpression_cluster_id=C1197 | |coexpression_cluster_id=C1197 | ||
|description=CAGE_peak_17_at_AJUBA_5end | |description=CAGE_peak_17_at_AJUBA_5end | ||
|id=chr14:23445892..23445897,- | |id=chr14:23445892..23445897,- | ||
|ontology_enrichment_celltype=CL:0000066!3.43e-14!254;CL:0000181!1.32e-13!12;CL:0000417!1.32e-13!12;CL:0000668!1.32e-13!12;CL:0000414!1.32e-13!12;CL:0000412!1.32e-13!12;CL:0000182!1.32e-13!12;CL:0000223!6.59e-10!59;CL:0002321!1.53e-08!248;CL:0000220!4.32e-08!246;CL:0005020!2.69e-07!6;CL:0002138!2.69e-07!6;CL:0005022!2.69e-07!6 | |ontology_enrichment_celltype=CL:0000066!3.43e-14!254;CL:0000181!1.32e-13!12;CL:0000417!1.32e-13!12;CL:0000668!1.32e-13!12;CL:0000414!1.32e-13!12;CL:0000412!1.32e-13!12;CL:0000182!1.32e-13!12;CL:0000223!6.59e-10!59;CL:0002321!1.53e-08!248;CL:0000220!4.32e-08!246;CL:0005020!2.69e-07!6;CL:0002138!2.69e-07!6;CL:0005022!2.69e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002567;2.59e-12;3!CL:0000182;4.54e-12;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,2.31e-12,3;CL:0000182,4.80e-12,12 | |||
|ontology_enrichment_development_v019=UBERON:0009497;6.18e-41;13!UBERON:0004161;1.07e-27;11!UBERON:0001041;3.58e-18;30!UBERON:0003104;3.73e-10;31 | |||
|ontology_enrichment_disease=DOID:7!1.47e-13!39;DOID:305!2.75e-10!106;DOID:0050687!4.31e-08!143 | |ontology_enrichment_disease=DOID:7!1.47e-13!39;DOID:305!2.75e-10!106;DOID:0050687!4.31e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0008835!2.15e-18!22;UBERON:0003894!2.15e-18!22;UBERON:0009854!1.91e-17!23;UBERON:0007499!8.92e-16!25;UBERON:0009497!8.92e-16!25;UBERON:0000015!8.92e-16!25;UBERON:0002423!8.92e-16!25;UBERON:0006235!8.92e-16!25;UBERON:0004161!8.92e-16!25;UBERON:0002107!2.18e-15!19;UBERON:0006925!2.18e-15!19;UBERON:0008836!2.18e-15!19;UBERON:0009856!4.87e-15!26;UBERON:0003929!1.77e-14!54;UBERON:0005057!1.56e-10!26;UBERON:0002368!4.09e-10!35;UBERON:0002365!4.93e-10!31;UBERON:0002330!4.93e-10!31;UBERON:0005911!8.72e-10!82;UBERON:0002530!1.17e-08!59;UBERON:0004921!2.32e-08!129;UBERON:0004185!2.32e-08!129;UBERON:0001007!7.30e-08!155;UBERON:0001555!7.30e-08!155;UBERON:0007026!7.30e-08!155;UBERON:0005172!1.95e-07!55;UBERON:0005173!1.95e-07!55;UBERON:0000490!2.00e-07!138;UBERON:0004119!3.14e-07!169;UBERON:0000925!3.14e-07!169;UBERON:0006595!3.14e-07!169;UBERON:0000949!3.44e-07!45 | |ontology_enrichment_uberon=UBERON:0008835!2.15e-18!22;UBERON:0003894!2.15e-18!22;UBERON:0009854!1.91e-17!23;UBERON:0007499!8.92e-16!25;UBERON:0009497!8.92e-16!25;UBERON:0000015!8.92e-16!25;UBERON:0002423!8.92e-16!25;UBERON:0006235!8.92e-16!25;UBERON:0004161!8.92e-16!25;UBERON:0002107!2.18e-15!19;UBERON:0006925!2.18e-15!19;UBERON:0008836!2.18e-15!19;UBERON:0009856!4.87e-15!26;UBERON:0003929!1.77e-14!54;UBERON:0005057!1.56e-10!26;UBERON:0002368!4.09e-10!35;UBERON:0002365!4.93e-10!31;UBERON:0002330!4.93e-10!31;UBERON:0005911!8.72e-10!82;UBERON:0002530!1.17e-08!59;UBERON:0004921!2.32e-08!129;UBERON:0004185!2.32e-08!129;UBERON:0001007!7.30e-08!155;UBERON:0001555!7.30e-08!155;UBERON:0007026!7.30e-08!155;UBERON:0005172!1.95e-07!55;UBERON:0005173!1.95e-07!55;UBERON:0000490!2.00e-07!138;UBERON:0004119!3.14e-07!169;UBERON:0000925!3.14e-07!169;UBERON:0006595!3.14e-07!169;UBERON:0000949!3.44e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0002423;2.73e-33;25!UBERON:0002107;2.86e-28;19!UBERON:0006925;2.86e-28;19!UBERON:0002365;2.01e-17;31!UBERON:0002330;2.01e-17;31!UBERON:0002368;2.00e-14;33!UBERON:0002394;1.44e-09;4!UBERON:0003928;1.44e-09;4!UBERON:0005172;8.97e-09;52!UBERON:0005173;8.97e-09;52!UBERON:0000949;6.54e-08;43 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,1.07e-37,22;UBERON:0003894,1.07e-37,22;UBERON:0009854,4.33e-36,23;UBERON:0007499,2.93e-33,25;UBERON:0009497,2.93e-33,25;UBERON:0000015,2.93e-33,25;UBERON:0002423,2.93e-33,25;UBERON:0006235,2.93e-33,25;UBERON:0004161,2.93e-33,25;UBERON:0009856,5.23e-32,26;UBERON:0002107,2.67e-28,19;UBERON:0006925,2.67e-28,19;UBERON:0008836,2.67e-28,19;UBERON:0002365,1.26e-17,31;UBERON:0002330,1.26e-17,31;UBERON:0003929,9.99e-16,54;UBERON:0002368,1.09e-15,35;UBERON:0000949,2.44e-12,45;UBERON:0005911,1.61e-10,82;UBERON:0005172,2.23e-10,54;UBERON:0005173,2.23e-10,54;UBERON:0001041,6.12e-10,87;UBERON:0002530,1.52e-09,59;UBERON:0002417,2.15e-09,60;UBERON:0000916,2.15e-09,60;UBERON:0003914,1.73e-07,117;UBERON:0004921,2.29e-07,118;UBERON:0005256,3.41e-07,122;UBERON:0002394,9.49e-07,6;UBERON:0003928,9.49e-07,6 | |||
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| ||
|short_description=p17@AJUBA | |short_description=p17@AJUBA | ||
}} | }} |
Latest revision as of 08:24, 19 September 2015
Short description: | p17@AJUBA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_AJUBA_5end |
Coexpression cluster: | C1197_hepatoma_Hepatocyte_liver_argyrophil_hepatocellular_gastrointestinal_mesothelioma |
Association with transcript: | 115bp_to_ENST00000553911_5end |
EntrezGene: | AJUBA |
HGNC: | 20250 |
UniProt: | G3V5F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 2.31e-12 | 3 |
hepatocyte | 4.80e-12 | 12 |
Ontology term | p-value | n |
---|---|---|
hepatic diverticulum | 1.07e-37 | 22 |
liver primordium | 1.07e-37 | 22 |
digestive tract diverticulum | 4.33e-36 | 23 |
epithelial sac | 2.93e-33 | 25 |
epithelium of foregut-midgut junction | 2.93e-33 | 25 |
anatomical boundary | 2.93e-33 | 25 |
hepatobiliary system | 2.93e-33 | 25 |
foregut-midgut junction | 2.93e-33 | 25 |
septum transversum | 2.93e-33 | 25 |
sac | 5.23e-32 | 26 |
liver | 2.67e-28 | 19 |
digestive gland | 2.67e-28 | 19 |
liver bud | 2.67e-28 | 19 |
exocrine gland | 1.26e-17 | 31 |
exocrine system | 1.26e-17 | 31 |
gut epithelium | 9.99e-16 | 54 |
endocrine gland | 1.09e-15 | 35 |
endocrine system | 2.44e-12 | 45 |
endo-epithelium | 1.61e-10 | 82 |
abdomen element | 2.23e-10 | 54 |
abdominal segment element | 2.23e-10 | 54 |
foregut | 6.12e-10 | 87 |
gland | 1.52e-09 | 59 |
abdominal segment of trunk | 2.15e-09 | 60 |
abdomen | 2.15e-09 | 60 |
epithelial tube | 1.73e-07 | 117 |
subdivision of digestive tract | 2.29e-07 | 118 |
trunk mesenchyme | 3.41e-07 | 122 |
bile duct | 9.49e-07 | 6 |
digestive system duct | 9.49e-07 | 6 |