FFCP PHASE1:Hg19::chr14:23445927..23445936,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:23445927..23445936,-
|short_description=p15@AJUBA
|description=CAGE_peak_15_at_AJUBA_5end
|association_with_transcript=76bp_to_ENST00000553911_5end
|Entr...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84962 | |EntrezGene=84962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20250 | |HGNC=20250 | ||
|TSSclassifier=strong | |||
|UniProt=G3V5F5 | |UniProt=G3V5F5 | ||
|association_with_transcript=76bp_to_ENST00000553911_5end | |||
|cluster_id=chr14:23445927..23445936,- | |||
|coexpression_cluster_id=C1197 | |||
|description=CAGE_peak_15_at_AJUBA_5end | |||
|id=chr14:23445927..23445936,- | |||
|ontology_enrichment_celltype=CL:0000223!8.14e-17!59;CL:0000066!3.63e-15!254;CL:0002076!1.26e-09!43;CL:0000181!1.36e-09!12;CL:0000417!1.36e-09!12;CL:0000668!1.36e-09!12;CL:0000414!1.36e-09!12;CL:0000412!1.36e-09!12;CL:0000182!1.36e-09!12;CL:0002251!1.45e-08!21;CL:0000220!8.06e-07!246 | |||
|ontology_enrichment_celltype_v019=CL:0000307;1.60e-09;3!CL:0000182;2.35e-09;12!CL:0002563;1.86e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.81e-09,3;CL:0000069,1.81e-09,3;CL:0000307,1.81e-09,3;CL:0000377,1.81e-09,3;CL:0000182,2.35e-09,12;CL:0002563,1.69e-07,4;CL:0000223,2.81e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0009497;6.45e-31;13!UBERON:0004161;5.33e-21;11!UBERON:0001041;6.88e-21;30!CL:0000377;1.60e-09;3!UBERON:0003104;9.51e-08;31 | |||
|ontology_enrichment_disease=DOID:305!3.02e-17!106;DOID:0050687!5.81e-12!143;DOID:299!1.10e-10!25;DOID:7!3.43e-09!39;DOID:14566!8.74e-08!239;DOID:162!1.80e-07!235;DOID:4929!3.14e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0008835!4.36e-16!22;UBERON:0003894!4.36e-16!22;UBERON:0009854!2.82e-15!23;UBERON:0007499!7.53e-14!25;UBERON:0009497!7.53e-14!25;UBERON:0000015!7.53e-14!25;UBERON:0002423!7.53e-14!25;UBERON:0006235!7.53e-14!25;UBERON:0004161!7.53e-14!25;UBERON:0003929!2.78e-13!54;UBERON:0009856!3.21e-13!26;UBERON:0005911!6.29e-12!82;UBERON:0001007!1.01e-10!155;UBERON:0001555!1.01e-10!155;UBERON:0007026!1.01e-10!155;UBERON:0002107!3.49e-10!19;UBERON:0006925!3.49e-10!19;UBERON:0008836!3.49e-10!19;UBERON:0004119!4.57e-10!169;UBERON:0000925!4.57e-10!169;UBERON:0006595!4.57e-10!169;UBERON:0004921!4.90e-09!129;UBERON:0004185!4.90e-09!129;UBERON:0005172!2.18e-08!55;UBERON:0005173!2.18e-08!55;UBERON:0002394!9.87e-08!4;UBERON:0003928!9.87e-08!4;UBERON:0002368!1.52e-07!35;UBERON:0001041!2.78e-07!98;UBERON:0002417!2.97e-07!61;UBERON:0000916!2.97e-07!61;UBERON:0005057!4.82e-07!26;UBERON:0002365!4.97e-07!31;UBERON:0002330!4.97e-07!31;UBERON:0005177!5.21e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;4.39e-25;25!UBERON:0002107;2.20e-21;19!UBERON:0006925;2.20e-21;19!UBERON:0002365;3.50e-13;31!UBERON:0002330;3.50e-13;31!UBERON:0002368;6.04e-11;33!UBERON:0002394;1.54e-07;4!UBERON:0003928;1.54e-07;4!UBERON:0001242;1.86e-07;4!UBERON:0001262;1.86e-07;4!UBERON:0004786;1.86e-07;4!UBERON:0004808;1.86e-07;4!UBERON:0001277;1.86e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0008835,1.97e-28,22;UBERON:0003894,1.97e-28,22;UBERON:0009854,3.24e-27,23;UBERON:0007499,4.50e-25,25;UBERON:0009497,4.50e-25,25;UBERON:0000015,4.50e-25,25;UBERON:0002423,4.50e-25,25;UBERON:0006235,4.50e-25,25;UBERON:0004161,4.50e-25,25;UBERON:0009856,4.00e-24,26;UBERON:0002107,2.20e-21,19;UBERON:0006925,2.20e-21,19;UBERON:0008836,2.20e-21,19;UBERON:0003929,1.11e-16,54;UBERON:0005911,7.37e-15,82;UBERON:0001041,5.56e-14,87;UBERON:0004921,2.56e-13,118;UBERON:0002365,2.61e-13,31;UBERON:0002330,2.61e-13,31;UBERON:0002368,7.69e-12,35;UBERON:0001007,7.53e-11,145;UBERON:0001555,7.53e-11,145;UBERON:0007026,7.53e-11,145;UBERON:0004119,7.84e-10,160;UBERON:0000925,7.84e-10,160;UBERON:0006595,7.84e-10,160;UBERON:0000949,2.65e-09,45;UBERON:0005177,6.23e-09,101;UBERON:0009569,4.68e-08,112;UBERON:0005172,8.16e-08,54;UBERON:0005173,8.16e-08,54;UBERON:0001048,1.39e-07,160;UBERON:0001242,1.69e-07,4;UBERON:0001262,1.69e-07,4;UBERON:0004786,1.69e-07,4;UBERON:0004808,1.69e-07,4;UBERON:0001277,1.69e-07,4;UBERON:0002530,3.50e-07,59;UBERON:0002417,4.56e-07,60;UBERON:0000916,4.56e-07,60;UBERON:0011216,6.23e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9313088667105,0.590789906681404,0,1.47586126251736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,1.08890984861323,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0,0,0,0.0898683511473268,2.14825409610731,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432271251462318,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.247247575143499,0.404421263125109,6.10250385391442,0,0,0,0.160753148465019,0,0,0,0,0,0,0.315222829196793,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,2.19828350517124,1.32506888912221,0,0,1.36869470307464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0.512483037175893,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.231051332300676,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0.0634158101939068,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0.31020638566432,0,0.111855431797792,0.883352102537187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0.179650404213174,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9313088667105,0.590789906681404,0,1.47586126251736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0.0962221127255121,0,1.08890984861323,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0,0,0,0.0898683511473268,2.14825409610731,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.652931232636591,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432271251462318,0,0.171594997861965,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393915911536118,0.247247575143499,0.404421263125109,6.10250385391442,0,0,0,0.160753148465019,0,0,0,0,0,0,0.315222829196793,0.157363764404994,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,2.19828350517124,1.32506888912221,0,0,1.36869470307464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0.512483037175893,0.345430341731199,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0.231051332300676,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0.0634158101939068,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431855182437243,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0.31020638566432,0,0.111855431797792,0.883352102537187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0.0814032686109745,0.106727345877715,0,0.179650404213174,0,0,0,0,0,0 | ||
|short_description=p15@AJUBA | |||
}} | }} |
Latest revision as of 08:25, 19 September 2015
Short description: | p15@AJUBA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_AJUBA_5end |
Coexpression cluster: | C1197_hepatoma_Hepatocyte_liver_argyrophil_hepatocellular_gastrointestinal_mesothelioma |
Association with transcript: | 76bp_to_ENST00000553911_5end |
EntrezGene: | AJUBA |
HGNC: | 20250 |
UniProt: | G3V5F5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.81e-09 | 3 |
branched duct epithelial cell | 1.81e-09 | 3 |
tracheal epithelial cell | 1.81e-09 | 3 |
tracheoblast | 1.81e-09 | 3 |
hepatocyte | 2.35e-09 | 12 |
intestinal epithelial cell | 1.69e-07 | 4 |
endodermal cell | 2.81e-07 | 58 |