FFCP PHASE1:Hg19::chr14:23451753..23451767,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:23451753..23451767,-
|short_description=p2@AJUBA
|description=CAGE_peak_2_at_AJUBA_5end
|association_with_transcript=80bp_to_NM_032876,uc001whz.2_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84962 | |EntrezGene=84962 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20250 | |HGNC=20250 | ||
|TSSclassifier=strong | |||
|UniProt=Q96IF1 | |UniProt=Q96IF1 | ||
|association_with_transcript=80bp_to_NM_032876,uc001whz.2_5end | |||
|cluster_id=chr14:23451753..23451767,- | |||
|coexpression_cluster_id=C1716 | |||
|description=CAGE_peak_2_at_AJUBA_5end | |||
|id=chr14:23451753..23451767,- | |||
|ontology_enrichment_celltype=CL:0000066!5.26e-48!254;CL:0002321!5.11e-30!248;CL:0000220!5.97e-30!246;CL:0000223!1.81e-18!59;CL:0002076!1.74e-16!43;CL:0000076!1.15e-13!62;CL:0000548!1.76e-13!679;CL:0000004!1.76e-13!679;CL:0000255!1.76e-13!679;CL:0000012!7.36e-13!682;CL:0002251!2.41e-09!21;CL:0000055!1.68e-08!180;CL:0002368!5.02e-08!13;CL:0000222!6.47e-08!119;CL:0000213!8.30e-07!57;CL:0000215!8.30e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.96e-13;42!CL:0002251;2.05e-09;20!CL:0002368;8.68e-09;13!CL:0000076;4.74e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.47e-50,253;CL:0002321,2.24e-29,250;CL:0000223,1.83e-18,58;CL:0002076,4.33e-17,42;CL:0000076,5.54e-15,63;CL:0002251,2.16e-09,20;CL:0002368,1.04e-08,13;CL:0000222,3.19e-08,121;CL:0000213,1.19e-07,58;CL:0000215,1.19e-07,58 | |||
|ontology_enrichment_development_v019=CL:0000223;8.02e-10;58 | |||
|ontology_enrichment_disease=DOID:305!5.78e-12!106;DOID:0050687!5.89e-12!143;DOID:7!1.38e-09!39 | |||
|ontology_enrichment_disease_v019=DOID:7;4.02e-08;39!DOID:1749;2.94e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.88e-11,106;DOID:0050687,7.12e-11,143;DOID:7,6.29e-10,39;DOID:1749,4.62e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.30e-20!169;UBERON:0000925!2.30e-20!169;UBERON:0006595!2.30e-20!169;UBERON:0003104!6.86e-17!238;UBERON:0009142!6.86e-17!238;UBERON:0000475!2.35e-15!365;UBERON:0000481!2.50e-15!347;UBERON:0001007!3.38e-15!155;UBERON:0001555!3.38e-15!155;UBERON:0007026!3.38e-15!155;UBERON:0002100!2.15e-13!216;UBERON:0000077!1.77e-12!130;UBERON:0000468!4.66e-12!659;UBERON:0005911!2.13e-11!82;UBERON:0005256!7.98e-11!143;UBERON:0003102!1.50e-10!95;UBERON:0004921!1.50e-10!129;UBERON:0004185!1.50e-10!129;UBERON:0000119!2.39e-10!312;UBERON:0000490!2.48e-10!138;UBERON:0000483!2.52e-10!309;UBERON:0005177!3.43e-10!107;UBERON:0000467!8.42e-10!625;UBERON:0000480!1.40e-09!626;UBERON:0000466!1.46e-09!126;UBERON:0009569!1.83e-09!113;UBERON:0001048!2.07e-09!168;UBERON:0001444!5.02e-09!48;UBERON:0005085!8.56e-09!29;UBERON:0003929!1.09e-08!54;UBERON:0006554!1.25e-08!44;UBERON:0001008!1.54e-08!45;UBERON:0001041!2.58e-08!98;UBERON:0005172!8.70e-08!55;UBERON:0005173!8.70e-08!55;UBERON:0001004!1.50e-07!72;UBERON:0000064!2.63e-07!219;UBERON:0002530!2.88e-07!59;UBERON:0002417!4.70e-07!61;UBERON:0000916!4.70e-07!61;UBERON:0002365!5.09e-07!31;UBERON:0002330!5.09e-07!31;UBERON:0003914!5.76e-07!118 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;4.09e-07;30!UBERON:0001008;4.09e-07;30!UBERON:0000344;5.56e-07;20!UBERON:0002365;6.68e-07;31!UBERON:0002330;6.68e-07;31!UBERON:0010371;8.77e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.27e-17,160;UBERON:0000925,1.27e-17,160;UBERON:0006595,1.27e-17,160;UBERON:0001007,2.00e-12,145;UBERON:0001555,2.00e-12,145;UBERON:0007026,2.00e-12,145;UBERON:0005911,5.49e-11,82;UBERON:0003102,1.86e-10,99;UBERON:0006554,2.11e-09,47;UBERON:0002100,2.17e-09,199;UBERON:0001008,2.61e-09,48;UBERON:0003104,4.00e-09,160;UBERON:0009142,4.00e-09,160;UBERON:0005177,8.49e-09,101;UBERON:0000490,1.12e-08,148;UBERON:0003929,2.59e-08,54;UBERON:0004921,2.62e-08,118;UBERON:0005085,3.09e-08,31;UBERON:0000119,3.56e-08,309;UBERON:0000483,3.79e-08,306;UBERON:0000033,1.07e-07,56;UBERON:0009569,1.37e-07,112;UBERON:0001444,2.16e-07,49;UBERON:0002365,4.05e-07,31;UBERON:0002330,4.05e-07,31;UBERON:0001048,4.26e-07,160;UBERON:0001004,4.32e-07,74;UBERON:0000344,8.19e-07,20;UBERON:0005172,8.27e-07,54;UBERON:0005173,8.27e-07,54 | |||
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| ||
|short_description=p2@AJUBA | |||
}} | }} |
Latest revision as of 08:30, 19 September 2015
Short description: | p2@AJUBA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AJUBA_5end |
Coexpression cluster: | C1716_Corneal_oral_Keratinocyte_mesothelioma_Esophageal_Urothelial_anaplastic |
Association with transcript: | 80bp_to_NM_032876, uc001whz.2_5end |
EntrezGene: | AJUBA |
HGNC: | 20250 |
UniProt: | Q96IF1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.47e-50 | 253 |
embryonic cell | 2.24e-29 | 250 |
endodermal cell | 1.83e-18 | 58 |
endo-epithelial cell | 4.33e-17 | 42 |
squamous epithelial cell | 5.54e-15 | 63 |
epithelial cell of alimentary canal | 2.16e-09 | 20 |
respiratory epithelial cell | 1.04e-08 | 13 |
mesodermal cell | 3.19e-08 | 121 |
lining cell | 1.19e-07 | 58 |
barrier cell | 1.19e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 1.27e-17 | 160 |
endoderm | 1.27e-17 | 160 |
presumptive endoderm | 1.27e-17 | 160 |
digestive system | 2.00e-12 | 145 |
digestive tract | 2.00e-12 | 145 |
primitive gut | 2.00e-12 | 145 |
endo-epithelium | 5.49e-11 | 82 |
surface structure | 1.86e-10 | 99 |
urinary system structure | 2.11e-09 | 47 |
trunk | 2.17e-09 | 199 |
renal system | 2.61e-09 | 48 |
mesenchyme | 4.00e-09 | 160 |
entire embryonic mesenchyme | 4.00e-09 | 160 |
trunk region element | 8.49e-09 | 101 |
unilaminar epithelium | 1.12e-08 | 148 |
gut epithelium | 2.59e-08 | 54 |
subdivision of digestive tract | 2.62e-08 | 118 |
ectodermal placode | 3.09e-08 | 31 |
cell layer | 3.56e-08 | 309 |
epithelium | 3.79e-08 | 306 |
head | 1.07e-07 | 56 |
subdivision of trunk | 1.37e-07 | 112 |
subdivision of head | 2.16e-07 | 49 |
exocrine gland | 4.05e-07 | 31 |
exocrine system | 4.05e-07 | 31 |
primordium | 4.26e-07 | 160 |
respiratory system | 4.32e-07 | 74 |
mucosa | 8.19e-07 | 20 |
abdomen element | 8.27e-07 | 54 |
abdominal segment element | 8.27e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.88e-11 | 106 |
cell type cancer | 7.12e-11 | 143 |
disease of anatomical entity | 6.29e-10 | 39 |
squamous cell carcinoma | 4.62e-07 | 14 |