FFCP PHASE1:Hg19::chr15:80445113..80445170,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:80445113..80445170,+ to FFCP PHASE1:Hg19::chr15:80445113..80445170,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2184 | |EntrezGene=2184 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3579 | |HGNC=3579 | ||
|TSSclassifier=strong | |||
|UniProt=P16930,B7Z4W2 | |UniProt=P16930,B7Z4W2 | ||
|association_with_transcript=0bp_to_ENST00000261755,ENST00000407106,ENST00000537726,ENST00000558767,uc002bfj.2,uc002bfk.1,uc010unl.1_5end | |||
|cluster_id=chr15:80445113..80445170,+ | |||
|description=CAGE_peak_2_at_FAH_5end | |||
|id=chr15:80445113..80445170,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.55e-20!180;CL:0000183!7.01e-17!59;CL:0000680!3.65e-15!57;CL:0000056!3.65e-15!57;CL:0000355!3.65e-15!57;CL:0000187!4.20e-15!54;CL:0000222!8.84e-14!119;CL:0002371!6.94e-13!591;CL:0000192!8.38e-13!42;CL:0000514!8.38e-13!42;CL:0000144!1.03e-12!625;CL:0000220!3.51e-12!246;CL:0002321!7.63e-12!248;CL:0000393!5.64e-11!60;CL:0000211!5.64e-11!60;CL:0000359!1.90e-10!32;CL:0000057!5.86e-09!75;CL:0000548!1.91e-08!679;CL:0000004!1.91e-08!679;CL:0000255!1.91e-08!679;CL:0000012!2.45e-08!682 | |||
|ontology_enrichment_celltype_v019=CL:0000192;7.23e-10;43!CL:0000359;7.99e-10;32!CL:0000187;3.92e-09;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.17e-15,58;CL:0000056,1.17e-15,58;CL:0000355,1.17e-15,58;CL:0000187,1.34e-15,55;CL:0000222,4.44e-14,121;CL:0000192,2.75e-13,43;CL:0000514,2.75e-13,43;CL:0002321,4.98e-12,250;CL:0000393,2.29e-11,61;CL:0000211,2.29e-11,61;CL:0000359,1.73e-10,32;CL:0000057,6.31e-09,76 | |||
|ontology_enrichment_development_v019=CL:0000514;7.23e-10;43!CL:0000355;1.40e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.95e-19!143;UBERON:0000914!1.26e-18!83;UBERON:0002329!1.26e-18!83;UBERON:0003077!1.26e-18!83;UBERON:0003059!1.26e-18!83;UBERON:0007282!1.26e-18!83;UBERON:0009618!1.26e-18!83;UBERON:0007285!1.26e-18!83;UBERON:0004290!9.84e-18!70;UBERON:0000486!3.14e-17!82;UBERON:0002385!3.63e-15!63;UBERON:0001015!3.63e-15!63;UBERON:0000383!3.63e-15!63;UBERON:0001134!5.00e-15!61;UBERON:0002036!5.00e-15!61;UBERON:0003082!5.00e-15!61;UBERON:0002100!7.39e-13!216;UBERON:0003104!9.80e-12!238;UBERON:0009142!9.80e-12!238;UBERON:0003914!1.87e-11!118;UBERON:0000490!3.45e-11!138;UBERON:0000481!1.67e-10!347;UBERON:0003102!2.03e-09!95;UBERON:0004872!2.19e-09!84;UBERON:0000475!2.28e-09!365;UBERON:0001637!1.96e-08!42;UBERON:0003509!1.96e-08!42;UBERON:0004572!1.96e-08!42;UBERON:0000483!2.87e-08!309;UBERON:0000119!4.95e-08!312;UBERON:0003103!1.09e-07!69;UBERON:0002199!8.27e-07!45;UBERON:0002416!8.27e-07!45 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.91e-19,78;UBERON:0002329,3.05e-18,71;UBERON:0003059,3.05e-18,71;UBERON:0007282,3.05e-18,71;UBERON:0004290,3.05e-18,71;UBERON:0009618,3.05e-18,71;UBERON:0007524,8.12e-18,73;UBERON:0000486,1.01e-17,83;UBERON:0003077,1.11e-17,72;UBERON:0007285,1.11e-17,72;UBERON:0003104,1.88e-16,160;UBERON:0009142,1.88e-16,160;UBERON:0002385,1.18e-15,64;UBERON:0001015,1.18e-15,64;UBERON:0000383,1.18e-15,64;UBERON:0001134,1.63e-15,62;UBERON:0002036,1.63e-15,62;UBERON:0003082,1.63e-15,62;UBERON:0005256,3.81e-15,122;UBERON:0000490,1.25e-13,148;UBERON:0003914,4.16e-11,117;UBERON:0002100,7.14e-11,199;UBERON:0003102,1.08e-09,99;UBERON:0004872,2.09e-09,83;UBERON:0001637,1.82e-08,42;UBERON:0003509,1.82e-08,42;UBERON:0004572,1.82e-08,42;UBERON:0000483,2.39e-08,306;UBERON:0000119,4.16e-08,309;UBERON:0003103,2.59e-07,68;UBERON:0002199,2.65e-07,46;UBERON:0002416,2.65e-07,46 | |||
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| ||
|short_description=p2@FAH | |||
}} | }} |
Latest revision as of 08:55, 19 September 2015
Short description: | p2@FAH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAH_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000261755, ENST00000407106, ENST00000537726, ENST00000558767, uc002bfj.2, uc002bfk.1, uc010unl.1_5end |
EntrezGene: | FAH |
HGNC: | 3579 |
UniProt: | P16930B7Z4W2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.17e-15 | 58 |
myoblast | 1.17e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.17e-15 | 58 |
muscle cell | 1.34e-15 | 55 |
mesodermal cell | 4.44e-14 | 121 |
smooth muscle cell | 2.75e-13 | 43 |
smooth muscle myoblast | 2.75e-13 | 43 |
embryonic cell | 4.98e-12 | 250 |
electrically responsive cell | 2.29e-11 | 61 |
electrically active cell | 2.29e-11 | 61 |
vascular associated smooth muscle cell | 1.73e-10 | 32 |
fibroblast | 6.31e-09 | 76 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 3.91e-19 | 78 |
somite | 3.05e-18 | 71 |
presomitic mesoderm | 3.05e-18 | 71 |
presumptive segmental plate | 3.05e-18 | 71 |
dermomyotome | 3.05e-18 | 71 |
trunk paraxial mesoderm | 3.05e-18 | 71 |
dense mesenchyme tissue | 8.12e-18 | 73 |
multilaminar epithelium | 1.01e-17 | 83 |
paraxial mesoderm | 1.11e-17 | 72 |
presumptive paraxial mesoderm | 1.11e-17 | 72 |
mesenchyme | 1.88e-16 | 160 |
entire embryonic mesenchyme | 1.88e-16 | 160 |
muscle tissue | 1.18e-15 | 64 |
musculature | 1.18e-15 | 64 |
musculature of body | 1.18e-15 | 64 |
skeletal muscle tissue | 1.63e-15 | 62 |
striated muscle tissue | 1.63e-15 | 62 |
myotome | 1.63e-15 | 62 |
trunk mesenchyme | 3.81e-15 | 122 |
unilaminar epithelium | 1.25e-13 | 148 |
epithelial tube | 4.16e-11 | 117 |
trunk | 7.14e-11 | 199 |
surface structure | 1.08e-09 | 99 |
splanchnic layer of lateral plate mesoderm | 2.09e-09 | 83 |
artery | 1.82e-08 | 42 |
arterial blood vessel | 1.82e-08 | 42 |
arterial system | 1.82e-08 | 42 |
epithelium | 2.39e-08 | 306 |
cell layer | 4.16e-08 | 309 |
compound organ | 2.59e-07 | 68 |
integument | 2.65e-07 | 46 |
integumental system | 2.65e-07 | 46 |