FFCP PHASE1:Hg19::chr15:80445320..80445379,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2184 | |EntrezGene=2184 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3579 | |HGNC=3579 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc002bfl.1,uc002bfm.1_5end | |association_with_transcript=0bp_to_uc002bfl.1,uc002bfm.1_5end | ||
|cluster_id=chr15:80445320..80445379,+ | |||
|coexpression_cluster_id=C3520 | |||
|description=CAGE_peak_1_at_FAH_5end | |description=CAGE_peak_1_at_FAH_5end | ||
|id=chr15:80445320..80445379,+ | |id=chr15:80445320..80445379,+ | ||
|ontology_enrichment_celltype=CL:0002371!3.49e-25!591;CL:0000144!7.40e-25!625;CL:0000012!4.84e-20!682;CL:0000548!9.14e-20!679;CL:0000004!9.14e-20!679;CL:0000255!9.14e-20!679;CL:0000055!1.91e-15!180;CL:0000183!2.82e-14!59;CL:0000187!2.14e-13!54;CL:0000680!4.14e-13!57;CL:0000056!4.14e-13!57;CL:0000355!4.14e-13!57;CL:0000220!1.53e-12!246;CL:0000048!3.08e-12!430;CL:0002321!3.60e-12!248;CL:0000192!5.43e-12!42;CL:0000514!5.43e-12!42;CL:0000222!5.56e-12!119;CL:0000723!6.70e-12!436;CL:0000003!7.95e-12!722;CL:0000034!2.12e-11!444;CL:0000393!3.71e-11!60;CL:0000211!3.71e-11!60;CL:0000359!4.04e-09!32;CL:0000063!6.04e-08!578 | |ontology_enrichment_celltype=CL:0002371!3.49e-25!591;CL:0000144!7.40e-25!625;CL:0000012!4.84e-20!682;CL:0000548!9.14e-20!679;CL:0000004!9.14e-20!679;CL:0000255!9.14e-20!679;CL:0000055!1.91e-15!180;CL:0000183!2.82e-14!59;CL:0000187!2.14e-13!54;CL:0000680!4.14e-13!57;CL:0000056!4.14e-13!57;CL:0000355!4.14e-13!57;CL:0000220!1.53e-12!246;CL:0000048!3.08e-12!430;CL:0002321!3.60e-12!248;CL:0000192!5.43e-12!42;CL:0000514!5.43e-12!42;CL:0000222!5.56e-12!119;CL:0000723!6.70e-12!436;CL:0000003!7.95e-12!722;CL:0000034!2.12e-11!444;CL:0000393!3.71e-11!60;CL:0000211!3.71e-11!60;CL:0000359!4.04e-09!32;CL:0000063!6.04e-08!578 | ||
|ontology_enrichment_celltype_v019=CL:0000192;6.98e-09;43!CL:0000359;1.65e-08;32!CL:0000187;3.84e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,9.99e-14,55;CL:0000680,1.95e-13,58;CL:0000056,1.95e-13,58;CL:0000355,1.95e-13,58;CL:0000048,3.22e-13,427;CL:0000723,6.99e-13,433;CL:0002321,1.72e-12,250;CL:0000034,2.35e-12,441;CL:0000192,2.54e-12,43;CL:0000514,2.54e-12,43;CL:0000222,2.88e-12,121;CL:0000393,1.56e-11,61;CL:0000211,1.56e-11,61;CL:0000359,4.01e-09,32 | |||
|ontology_enrichment_development_v019=CL:0000514;6.98e-09;43!CL:0000355;1.11e-07;58 | |||
|ontology_enrichment_disease=DOID:8692!4.82e-11!31;DOID:1240!4.47e-09!39;DOID:2531!1.66e-07!51;DOID:0060083!1.66e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;8.57e-11;31!DOID:1240;3.00e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,4.78e-11,31;DOID:1240,4.44e-09,39;DOID:2531,1.58e-07,51;DOID:0060083,1.58e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0005256!1.20e-18!143;UBERON:0003914!2.37e-14!118;UBERON:0004290!2.54e-14!70;UBERON:0000914!3.64e-14!83;UBERON:0002329!3.64e-14!83;UBERON:0003077!3.64e-14!83;UBERON:0003059!3.64e-14!83;UBERON:0007282!3.64e-14!83;UBERON:0009618!3.64e-14!83;UBERON:0007285!3.64e-14!83;UBERON:0002100!1.48e-13!216;UBERON:0000486!2.57e-13!82;UBERON:0001134!5.17e-12!61;UBERON:0002036!5.17e-12!61;UBERON:0003082!5.17e-12!61;UBERON:0002385!5.42e-11!63;UBERON:0001015!5.42e-11!63;UBERON:0000383!5.42e-11!63;UBERON:0000490!7.44e-11!138;UBERON:0003104!2.32e-10!238;UBERON:0009142!2.32e-10!238;UBERON:0002107!3.90e-08!19;UBERON:0006925!3.90e-08!19;UBERON:0008836!3.90e-08!19;UBERON:0000926!4.87e-08!448;UBERON:0004120!4.87e-08!448;UBERON:0006603!4.87e-08!448;UBERON:0007499!2.72e-07!25;UBERON:0009856!4.73e-07!26;UBERON:0008835!8.12e-07!22;UBERON:0003894!8.12e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.19e-08;19!UBERON:0006925;4.19e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.61e-17,122;UBERON:0003104,5.70e-17,160;UBERON:0009142,5.70e-17,160;UBERON:0007503,1.94e-16,78;UBERON:0002329,1.20e-14,71;UBERON:0003059,1.20e-14,71;UBERON:0007282,1.20e-14,71;UBERON:0004290,1.20e-14,71;UBERON:0009618,1.20e-14,71;UBERON:0003914,4.61e-14,117;UBERON:0003077,6.12e-14,72;UBERON:0007285,6.12e-14,72;UBERON:0007524,6.27e-14,73;UBERON:0000486,1.25e-13,83;UBERON:0000490,3.73e-13,148;UBERON:0002100,4.38e-13,199;UBERON:0001134,2.49e-12,62;UBERON:0002036,2.49e-12,62;UBERON:0003082,2.49e-12,62;UBERON:0002385,2.67e-11,64;UBERON:0001015,2.67e-11,64;UBERON:0000383,2.67e-11,64;UBERON:0002107,3.88e-08,19;UBERON:0006925,3.88e-08,19;UBERON:0008836,3.88e-08,19;UBERON:0007499,2.70e-07,25;UBERON:0009856,4.70e-07,26;UBERON:0008835,8.08e-07,22;UBERON:0003894,8.08e-07,22 | |||
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| ||
|short_description=p1@FAH | |short_description=p1@FAH | ||
}} | }} |
Latest revision as of 08:56, 19 September 2015
Short description: | p1@FAH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAH_5end |
Coexpression cluster: | C3520_Mesenchymal_Hepatocyte_mature_liver_acute_Cardiac_Mesothelial |
Association with transcript: | 0bp_to_uc002bfl.1, uc002bfm.1_5end |
EntrezGene: | FAH |
HGNC: | 3579 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 9.99e-14 | 55 |
muscle precursor cell | 1.95e-13 | 58 |
myoblast | 1.95e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.95e-13 | 58 |
multi fate stem cell | 3.22e-13 | 427 |
somatic stem cell | 6.99e-13 | 433 |
embryonic cell | 1.72e-12 | 250 |
stem cell | 2.35e-12 | 441 |
smooth muscle cell | 2.54e-12 | 43 |
smooth muscle myoblast | 2.54e-12 | 43 |
mesodermal cell | 2.88e-12 | 121 |
electrically responsive cell | 1.56e-11 | 61 |
electrically active cell | 1.56e-11 | 61 |
vascular associated smooth muscle cell | 4.01e-09 | 32 |
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 1.61e-17 | 122 |
mesenchyme | 5.70e-17 | 160 |
entire embryonic mesenchyme | 5.70e-17 | 160 |
epithelial vesicle | 1.94e-16 | 78 |
somite | 1.20e-14 | 71 |
presomitic mesoderm | 1.20e-14 | 71 |
presumptive segmental plate | 1.20e-14 | 71 |
dermomyotome | 1.20e-14 | 71 |
trunk paraxial mesoderm | 1.20e-14 | 71 |
epithelial tube | 4.61e-14 | 117 |
paraxial mesoderm | 6.12e-14 | 72 |
presumptive paraxial mesoderm | 6.12e-14 | 72 |
dense mesenchyme tissue | 6.27e-14 | 73 |
multilaminar epithelium | 1.25e-13 | 83 |
unilaminar epithelium | 3.73e-13 | 148 |
trunk | 4.38e-13 | 199 |
skeletal muscle tissue | 2.49e-12 | 62 |
striated muscle tissue | 2.49e-12 | 62 |
myotome | 2.49e-12 | 62 |
muscle tissue | 2.67e-11 | 64 |
musculature | 2.67e-11 | 64 |
musculature of body | 2.67e-11 | 64 |
liver | 3.88e-08 | 19 |
digestive gland | 3.88e-08 | 19 |
liver bud | 3.88e-08 | 19 |
epithelial sac | 2.70e-07 | 25 |
sac | 4.70e-07 | 26 |
hepatic diverticulum | 8.08e-07 | 22 |
liver primordium | 8.08e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 4.78e-11 | 31 |
leukemia | 4.44e-09 | 39 |
hematologic cancer | 1.58e-07 | 51 |
immune system cancer | 1.58e-07 | 51 |