FFCP PHASE1:Hg19::chr5:96038476..96038517,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=831 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1515 | |||
|TSSclassifier=strong | |||
|UniProt=G5E946,E9PDE4,D6RBZ8,E9PCH5,E7ES10,E7EVY3,B7Z574,Q86YM9 | |||
|association_with_transcript=0bp_to_ENST00000309190,ENST00000504221,ENST00000504465,ENST00000508117,ENST00000509903,ENST00000510156,ENST00000511049,ENST00000511782,NM_173060,uc003kma.1,uc003kmb.2,uc003kmc.2,uc003kmd.2,uc003kme.2,uc003kmf.2,uc011cup.1,uc011cuq.1,uc011cur.1,uc011cus.1,uc011cut.1_5end | |||
|cluster_id=chr5:96038476..96038517,+ | |||
|coexpression_cluster_id=C4534 | |||
|description=CAGE_peak_1_at_CAST_5end | |||
|id=chr5:96038476..96038517,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!8.81e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,7.76e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0007023!9.73e-20!115;UBERON:0000062!7.54e-10!511;UBERON:0001049!6.56e-07!57;UBERON:0005068!6.56e-07!57;UBERON:0006241!6.56e-07!57;UBERON:0007135!6.56e-07!57;UBERON:0000924!8.11e-07!173;UBERON:0006601!8.11e-07!173;UBERON:0004121!8.76e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.51e-19,114;UBERON:0011216,1.37e-08,223 | |||
|phase1_expression=19.4395865819496,32.7573801553204,30.1642424765378,22.0161256376887,30.8403155154829,19.1914475302081,20.2639902534648,24.0053551902196,18.8053652303884,9.09215565055583,6.28021051175185,18.5675166310646,11.078213085595,21.6591117680082,20.2152399194029,18.8251041006497,15.6700577286234,13.8758917173601,8.78279037822912,3.81675280038043,4.08001382488506,0.626909442956176,16.3154512664702,14.0980657825071,9.54124060920501,24.3758764335965,23.7270703510343,31.7204448694127,3.54027849164014,9.59573495243032,8.66970290570026,27.5826367343678,13.8554722637995,30.3198288336766,0,0,5.28480790802725,7.20194031091441,9.02450013615638,8.24641308720237,14.3305903513552,19.7575136271578,11.5909005435384,4.21654892460738,4.1566353805769,3.63876091781724,7.90258725479328,22.6142338412004,22.6085650753426,6.04154023876516,6.14785695669842,8.0403958162119,30.3376199048224,30.9832648120237,27.0852973188684,7.52969358170419,12.0078706025452,8.7642158933583,17.4467818651414,17.3301674621091,17.9014395223732,4.61791820261403,6.18337338627059,6.39337125799041,9.28669563611469,16.4541715160431,4.35975574296902,12.8136819280939,18.251902144707,17.5922964211144,29.0591761264017,12.8897172595648,10.7597211729901,0.845021145247767,0.850417199860174,0.628975936525128,0.561643155732475,0.600707571366025,0.64290234678832,0.855038231223746,0.39783335439818,0,1.75996244461323,4.36910889009705,0.889509253863555,3.84057200309856,0.800791974072025,2.29900975981793,1.98313461835459,3.81621501814146,15.9379631350646,15.2681669236444,16.4377488093848,5.28685314316103,12.8916969485753,8.42829071280246,36.3913074710591,39.3010762749165,36.5970668219126,15.8827170621144,98.7544467899779,53.9730498537596,74.0341567950063,3.23090324967003,51.2614279006217,17.9442454612733,32.2256597880369,5.37983542847836,3.25148368899696,2.95988228286617,1.65810010671509,5.79606171470105,43.8928226959699,26.2190011527919,21.9524599990451,3.62589896632212,22.6100091225134,10.6524508099615,13.4100436770337,7.64556994377832,7.81300144627702,5.70271226669025,11.293133930833,9.98295567004463,7.49584359314075,5.6826540490564,3.28451198768419,36.2892137804518,13.9068901807424,22.8822558134822,48.7613732627923,12.0726154746655,15.5992325449107,20.9634708383048,18.048164782892,16.3676566425731,31.0161519349929,18.0054902011975,14.3692922089383,15.0775990274543,13.7022265681277,22.2664428346111,5.10013403609559,12.977455497455,58.418530857843,65.9951704364223,64.085736970093,2.62339686735876,0.571994910780128,1.11437250398869,18.882428699837,15.4842227119102,17.0098845787721,23.7429335608084,9.64848703282784,15.1314923067037,12.121708059135,28.6842602677955,36.9996913194179,39.1623116934664,7.65375702507379,15.9657142200888,7.32186172644509,14.7065232138347,8.1014194788176,26.7006187569398,45.3549332704863,47.522044763962,16.8648301212472,6.6448596169769,12.8241220751285,34.2629085333764,65.9226449052153,6.54141078213801,38.7638122322348,22.286970052966,33.4995227457444,8.03142538096678,20.2160977853064,20.7450712052654,5.33744978648525,7.89336154934912,29.8762593983776,16.838834008711,24.8462092732457,8.02194366518136,18.43762958336,4.92075006850973,33.088968144014,30.8054783634003,24.9579296521508,25.483286205697,27.6802734869505,25.8429484332137,22.4569588380383,16.2141298851534,26.0380968562929,16.6320400019487,21.759489776513,4.55080680969013,1.43723628363248,27.4387865745128,30.2786818090153,29.9229244722918,21.5099034231611,16.5503409731471,25.2399938963083,12.3641079644423,15.0687293978644,23.2777553812239,29.8823980634982,18.3055568611485,26.072289897325,14.9431513226465,22.1479059034592,24.9788971717074,21.2412671251413,19.4374006167968,29.4559675655358,28.6113520569297,19.5255275884138,25.3895287533653,18.8212257464641,41.3578225769455,32.7295344709002,35.2769652328475,3.78118489001746,3.44577397635862,5.80969714347592,8.39654545624501,5.80337957013945,1.82488679537915,21.9029345261742,8.36213219650751,4.14404764057442,14.8597736970233,26.7095408217747,30.6414612103196,33.5483533255422,32.5364890342701,28.0146690740281,38.1289027161711,36.0651341048867,24.6741293933101,30.4143270944286,29.2407839279257,11.8104872739944,1.40241773803446,4.5273141246454,4.41026134156626,110.276880294993,51.1070152672366,69.1224190817243,0.441463099414651,12.6678091699407,22.3038153388083,15.255289671799,25.8524032492525,43.4285160818245,39.0723238568995,7.81939932744779,2.07986957055916,7.21656710126366,16.1143262915357,23.8339649298718,19.3451039999839,22.2233046036773,23.211006572621,8.69224837755203,4.29243081047436,26.5914366574389,69.0312582160751,45.1838733357734,16.8720901176199,35.7801933063571,49.90483422932,83.0207505455404,70.0427791818648,24.9198741457387,95.576668151813,45.6971372528643,73.1868247858925,49.4331440220178,59.8389134441041,20.7638114335393,16.4255022990059,7.03304683260282,8.55362230113526,13.0590915733221,21.6247001647621,25.724378936752,4.93376771119587,8.28324130783232,19.7279988858356,27.4056037406489,7.15312891703765,12.67954128834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| |||
|short_description=p1@CAST | |||
}} |
Latest revision as of 09:05, 19 September 2015
Short description: | p1@CAST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CAST_5end |
Coexpression cluster: | C4534_skeletal_squamous_amniotic_heart_left_mesothelioma_somatostatinoma |
Association with transcript: | 0bp_to_ENST00000309190, ENST00000504221, ENST00000504465, ENST00000508117, ENST00000509903, ENST00000510156, ENST00000511049, ENST00000511782, NM_173060, uc003kma.1, uc003kmb.2, uc003kmc.2, uc003kmd.2, uc003kme.2, uc003kmf.2, uc011cup.1, uc011cuq.1, uc011cur.1, uc011cus.1, uc011cut.1_5end |
EntrezGene: | CAST |
HGNC: | 1515 |
UniProt: | G5E946E9PDE4D6RBZ8E9PCH5E7ES10E7EVY3B7Z574Q86YM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 2.51e-19 | 114 |
organ system subdivision | 1.37e-08 | 223 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 7.76e-08 | 143 |