FFCP PHASE1:Hg19::chr19:50431999..50432026,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22809 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=790 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y2D1 | |||
|association_with_transcript=25bp_to_ENST00000423777,uc010enq.1_5end | |||
|cluster_id=chr19:50431999..50432026,+ | |||
|description=CAGE_peak_4_at_ATF5_5end | |||
|id=chr19:50431999..50432026,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.58e-17!254;CL:0000548!1.56e-13!679;CL:0000004!1.56e-13!679;CL:0000255!1.56e-13!679;CL:0000220!4.33e-13!246;CL:0000012!9.18e-13!682;CL:0002321!1.72e-12!248;CL:0000063!1.17e-08!578;CL:0000144!1.45e-07!625;CL:0000222!2.43e-07!119;CL:0000359!3.45e-07!32;CL:0000003!3.77e-07!722 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.41e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.61e-11,253;CL:0002321,3.38e-10,250;CL:0000359,2.40e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000467!1.80e-11!625;UBERON:0000480!2.03e-11!626;UBERON:0000468!1.72e-09!659;UBERON:0000486!5.15e-09!82;UBERON:0005256!6.02e-09!143;UBERON:0001637!8.18e-09!42;UBERON:0003509!8.18e-09!42;UBERON:0004572!8.18e-09!42;UBERON:0000926!2.15e-08!448;UBERON:0004120!2.15e-08!448;UBERON:0006603!2.15e-08!448;UBERON:0002100!5.09e-08!216;UBERON:0003102!8.84e-08!95;UBERON:0003104!1.65e-07!238;UBERON:0009142!1.65e-07!238;UBERON:0000923!2.54e-07!604;UBERON:0005291!2.54e-07!604;UBERON:0006598!2.54e-07!604;UBERON:0002532!2.54e-07!604;UBERON:0000062!3.79e-07!511;UBERON:0002050!3.84e-07!605;UBERON:0005423!3.84e-07!605;UBERON:0004573!4.64e-07!33;UBERON:0004571!4.64e-07!33;UBERON:0000914!5.07e-07!83;UBERON:0002329!5.07e-07!83;UBERON:0003077!5.07e-07!83;UBERON:0003059!5.07e-07!83;UBERON:0007282!5.07e-07!83;UBERON:0009618!5.07e-07!83;UBERON:0007285!5.07e-07!83 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000486,5.70e-08,83;UBERON:0001637,1.93e-07,42;UBERON:0003509,1.93e-07,42;UBERON:0004572,1.93e-07,42;UBERON:0003102,2.44e-07,99;UBERON:0001737,2.90e-07,9 | |||
|phase1_expression=1.45342703416445,0.642301571672949,0.986680828671798,1.0007329835313,0,0.872338524100369,0,0.631719873426831,0.783556884599516,0.245733936501509,2.79120467188971,0.873765488520689,0.791300934685361,0,0,1.34465029290355,1.20538905604795,0.730310090387373,2.43966399395253,0.492484232307152,0.408001382488506,0.626909442956176,0.572471974262113,0.136874425072884,0.125542639594803,0,0.410502947249729,0.314843125254717,0.393364276848904,0,0,0.919421224478927,1.8072355126695,0,0,0,0,0,0,0,0,0.32389366601898,0.77272670290256,0.726991193897824,0.755751887377619,0,0.464858073811369,0,0.309706370895104,0.28769239232215,0.768482119587302,0.709446689665756,0.689491361473237,0,0,0.564727018627814,1.36453075028923,1.12361742222542,0.918251677112708,1.60464513538047,0.639337125799041,0,0,0.852449501065388,1.16083695451434,0.56738522469114,1.24564449799115,0.502497330513487,1.0429658368404,0.217188844705117,1.81619850790011,0.736555271975129,0.632924774881769,0.211255286311942,0.637812899895131,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0.260118695119756,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,1.34140171940727,0,0.722878304769133,0.50133791063589,0.434539556882471,2.3858578411533,0.486634870302636,0.472674085820339,0.221729397462564,0.087834785693126,0.130979075497713,2.5500670180478,1.48313777113772,0,0.348259474598534,1.46253756570752,0,0,0,0.79504962946682,0.860234595106124,0.347140501607594,0,2.09749718104953,0.550236083880135,0.417989933073621,0.258416759169329,1.42306505074684,0.66944122552934,0,0.760272105718513,0,0.367663080345869,0.81014194788176,0.535798369704479,0,0.563057402416611,0,0,0.732806975721629,0,0,0.872188104285069,0.496971951695318,1.13967460498122,1.98613771219828,0.286836620748814,1.41867352879343,1.12135520028461,0,0.49333509683432,0.311211035399766,0,0.326923806226917,0,0,0.937285727335186,1.5608003841516,0,1.04614076386261,0.352303495931295,0.323745888736263,0.561803226808994,0.816616685019573,0.982674538494144,1.03325781175765,1.18800285728205,0.741800787835671,0,0.718618141816238,1.0100166837244,1.00094815897571,3.04770527032601,0.438977620880838,0,0.751190294532984,0.453728732640084,1.07633781413317,0.213557388818567,0.847727604638247,0.300091096084402,1.44273540933814,0.257640540045629,0.558350568994769,0.337552664482532,0.584622030967192,0.252433774244115,0.184099797284599,0.646584227275248,0.355009592516614,1.30977727695932,0.847802961552438,1.93260853163297,1.36373060295417,2.86804595389004,0,0,0.116193942869518,0.310983165046111,0.756962552626885,0,1.56449532329816,1.28648187638577,5.52539685409922,0,0,1.77460200059766,1.68584690078102,2.16909926895134,1.7647035637183,1.96091499683166,1.18635309555548,2.29213223872279,0.784885860501384,1.53898862778556,0,0,0,0,0,1.96565443335525,1.18157981336281,0,1.22988438543114,0.857839051492628,2.19500570817251,1.1240175325762,1.80952150340936,1.01847289674383,0,1.03993478527958,0,0.811512834825538,0.469634776943287,0.288732895522148,0.462985512576611,0.190254152234598,0.790204397959275,0.858486162094873,0.246217006087397,0.234004265139238,0.743155811443641,0.93733833986777,1.6798212819886,1.84307626415102,0.268675568108545,0.290633938513962,1.53353071666084,0.985326475791887,0.528290604079356,0.621984346622316,0.144119953416961,0.37872730027914,0.825472625798197,0.763976851116555,0,1.71072446022705,0.616964956219941,0.600686115687835,0.285826432630578,0.560655421726804,0,0.51336800074665,1.03417372606222,3.57656445851882,1.690605505112,1.06375246633948,3.12022310734098,1.02882949704857,0,0.532844358032199,0,0,0.823240336780769,0.325736184293735,0,0,4.22015127883421,3.48613383440118,3.89894665610022,0,0.502257091432126,0,0.479249710983165,0,0,1.01346914667305,0.410952645100767,0.716243852959582,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0.12269149171914,0,0,1.66376689224646,1.96271887676878,1.57702415033935,1.63997980989798,0.300946099727719,2.27407504055985,0,0,0.368738337083406,1.82455590382974,0,0.686286847621712,0,0,0.106727557803444,0.909382714338778,1.66435439510497,0,0,0.767309866440312,0.280660094433074,0.512556597022804,1.02341449813341,0.804269605718038,0,1.07946785661859,1.06537035187876,1.06765302817952,0,1.27831416305955,1.81289174387433,2.40607764363942,1.38121483403844,0.68888668898764,1.0925470080403,0.524497659837696,0.451199612907412,1.23224539367064,3.13739907670742,2.92278449306521,0.633309773357254,0,0.510281115829547,0.647747748306418,1.54227252690289,0.812839312631559,0.501689773854853,1.01950509218015,1.66215201785745,1.56712328305525,0,0,0.512900250232778,0.328014645699706,0.325378394664303,0.309123034943167,1.00726411300178,0.660075999364704,3.44559322797703,1.95018073810956,1.6068392984416,0.870036464629098,0.770243085573222,0.15350367472613,0.413509717453592,0.214840489736547,0.145016693914229,0.767039646744908,1.86967274858148,1.4875642382488,1.53752053892085,1.02090169995667,1.2138933702666,3.718764394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| |||
|short_description=p4@ATF5 | |||
}} |
Latest revision as of 09:50, 19 September 2015
Short description: | p4@ATF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ATF5_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000423777, uc010enq.1_5end |
EntrezGene: | ATF5 |
HGNC: | 790 |
UniProt: | Q9Y2D1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.61e-11 | 253 |
embryonic cell | 3.38e-10 | 250 |
vascular associated smooth muscle cell | 2.40e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
multilaminar epithelium | 5.70e-08 | 83 |
artery | 1.93e-07 | 42 |
arterial blood vessel | 1.93e-07 | 42 |
arterial system | 1.93e-07 | 42 |
surface structure | 2.44e-07 | 99 |
larynx | 2.90e-07 | 9 |