FFCP PHASE1:Hg19::chr19:50435704..50435718,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:50435704..50435718,+ to FFCP PHASE1:Hg19::chr19:50435704..50435718,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=22809 | |EntrezGene=22809 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=790 | |HGNC=790 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y2D1 | |UniProt=Q9Y2D1 | ||
|association_with_transcript=-271bp_to_AF101388_5end | |||
|cluster_id=chr19:50435704..50435718,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_11_at_ATF5_5end | |||
|id=chr19:50435704..50435718,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002617;1.26e-21;2!CL:0000785;1.07e-11;1!CL:0000819;1.07e-11;1!CL:0000569;2.63e-11;4!CL:0000182;9.75e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,2.63e-21,2;CL:0000819,6.26e-12,1;CL:0000569,3.59e-11,4;CL:0000011,3.59e-11,4;CL:0000182,9.76e-09,12 | |||
|ontology_enrichment_development_v019=CL:0000011;2.63e-11;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060073;1.07e-11;1!DOID:8675;1.07e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,6.26e-12,1;DOID:8675,6.26e-12,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.74e-14;19!UBERON:0006925;3.74e-14;19!UBERON:0002423;9.89e-11;25!UBERON:0002365;1.26e-08;31!UBERON:0002330;1.26e-08;31!UBERON:0002368;1.63e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.64e-14,19;UBERON:0006925,3.64e-14,19;UBERON:0008836,3.64e-14,19;UBERON:0008835,3.21e-12,22;UBERON:0003894,3.21e-12,22;UBERON:0009854,1.10e-11,23;UBERON:0007499,9.70e-11,25;UBERON:0009497,9.70e-11,25;UBERON:0000015,9.70e-11,25;UBERON:0002423,9.70e-11,25;UBERON:0006235,9.70e-11,25;UBERON:0004161,9.70e-11,25;UBERON:0009856,2.54e-10,26;UBERON:0002365,1.24e-08,31;UBERON:0002330,1.24e-08,31;UBERON:0002368,1.25e-07,35;UBERON:0005172,9.08e-07,54;UBERON:0005173,9.08e-07,54 | |||
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| ||
|short_description=p11@ATF5 | |||
}} | }} |
Latest revision as of 10:09, 19 September 2015
Short description: | p11@ATF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ATF5_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -271bp_to_AF101388_5end |
EntrezGene: | ATF5 |
HGNC: | 790 |
UniProt: | Q9Y2D1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 2.63e-21 | 2 |
B-1 B cell | 6.26e-12 | 1 |
cardiac mesenchymal cell | 3.59e-11 | 4 |
migratory trunk neural crest cell | 3.59e-11 | 4 |
hepatocyte | 9.76e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.64e-14 | 19 |
digestive gland | 3.64e-14 | 19 |
liver bud | 3.64e-14 | 19 |
hepatic diverticulum | 3.21e-12 | 22 |
liver primordium | 3.21e-12 | 22 |
digestive tract diverticulum | 1.10e-11 | 23 |
epithelial sac | 9.70e-11 | 25 |
epithelium of foregut-midgut junction | 9.70e-11 | 25 |
anatomical boundary | 9.70e-11 | 25 |
hepatobiliary system | 9.70e-11 | 25 |
foregut-midgut junction | 9.70e-11 | 25 |
septum transversum | 9.70e-11 | 25 |
sac | 2.54e-10 | 26 |
exocrine gland | 1.24e-08 | 31 |
exocrine system | 1.24e-08 | 31 |
endocrine gland | 1.25e-07 | 35 |
abdomen element | 9.08e-07 | 54 |
abdominal segment element | 9.08e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 6.26e-12 | 1 |
lymphosarcoma | 6.26e-12 | 1 |