FFCP PHASE1:Hg19::chr18:3451646..3451691,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7050 | |EntrezGene=7050 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11776 | |HGNC=11776 | ||
|TSSclassifier=strong | |||
|UniProt=Q15583,A6NE42 | |UniProt=Q15583,A6NE42 | ||
|association_with_transcript=0bp_to_ENST00000330513,ENST00000345133_5end | |association_with_transcript=0bp_to_ENST00000330513,ENST00000345133_5end | ||
|cluster_id=chr18:3451646..3451691,+ | |||
|description=CAGE_peak_3_at_TGIF1_5end | |description=CAGE_peak_3_at_TGIF1_5end | ||
|id=chr18:3451646..3451691,+ | |id=chr18:3451646..3451691,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.39e-18!180;CL:0002321!2.03e-13!248;CL:0000220!1.02e-12!246;CL:0000548!1.17e-12!679;CL:0000004!1.17e-12!679;CL:0000255!1.17e-12!679;CL:0000012!8.59e-12!682;CL:0000057!2.27e-11!75;CL:0000144!2.57e-09!625;CL:0002371!1.41e-08!591;CL:0000393!1.51e-08!60;CL:0000211!1.51e-08!60;CL:0000680!1.54e-07!57;CL:0000056!1.54e-07!57;CL:0000355!1.54e-07!57;CL:0000183!1.96e-07!59;CL:0000192!3.25e-07!42;CL:0000514!3.25e-07!42;CL:0000187!3.44e-07!54;CL:0000066!5.39e-07!254 | |ontology_enrichment_celltype=CL:0000055!1.39e-18!180;CL:0002321!2.03e-13!248;CL:0000220!1.02e-12!246;CL:0000548!1.17e-12!679;CL:0000004!1.17e-12!679;CL:0000255!1.17e-12!679;CL:0000012!8.59e-12!682;CL:0000057!2.27e-11!75;CL:0000144!2.57e-09!625;CL:0002371!1.41e-08!591;CL:0000393!1.51e-08!60;CL:0000211!1.51e-08!60;CL:0000680!1.54e-07!57;CL:0000056!1.54e-07!57;CL:0000355!1.54e-07!57;CL:0000183!1.96e-07!59;CL:0000192!3.25e-07!42;CL:0000514!3.25e-07!42;CL:0000187!3.44e-07!54;CL:0000066!5.39e-07!254 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,9.63e-13,250;CL:0000057,1.87e-11,76;CL:0000393,1.64e-08,61;CL:0000211,1.64e-08,61;CL:0000680,1.76e-07,58;CL:0000056,1.76e-07,58;CL:0000355,1.76e-07,58;CL:0000192,1.95e-07,43;CL:0000514,1.95e-07,43;CL:0000187,4.07e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.86e-21!659;UBERON:0000922!1.26e-13!612;UBERON:0000467!1.37e-13!625;UBERON:0000480!2.86e-13!626;UBERON:0002100!7.44e-13!216;UBERON:0002050!8.39e-12!605;UBERON:0005423!8.39e-12!605;UBERON:0000923!1.21e-11!604;UBERON:0005291!1.21e-11!604;UBERON:0006598!1.21e-11!604;UBERON:0002532!1.21e-11!604;UBERON:0005256!1.05e-10!143;UBERON:0000926!1.40e-10!448;UBERON:0004120!1.40e-10!448;UBERON:0006603!1.40e-10!448;UBERON:0003102!1.85e-09!95;UBERON:0000914!4.46e-09!83;UBERON:0002329!4.46e-09!83;UBERON:0003077!4.46e-09!83;UBERON:0003059!4.46e-09!83;UBERON:0007282!4.46e-09!83;UBERON:0009618!4.46e-09!83;UBERON:0007285!4.46e-09!83;UBERON:0000475!4.72e-09!365;UBERON:0000062!4.31e-08!511;UBERON:0003104!5.65e-08!238;UBERON:0009142!5.65e-08!238;UBERON:0004119!1.43e-07!169;UBERON:0000925!1.43e-07!169;UBERON:0006595!1.43e-07!169;UBERON:0000481!2.64e-07!347;UBERON:0002204!2.68e-07!167;UBERON:0000486!4.08e-07!82;UBERON:0001007!4.51e-07!155;UBERON:0001555!4.51e-07!155;UBERON:0007026!4.51e-07!155 | |ontology_enrichment_uberon=UBERON:0000468!1.86e-21!659;UBERON:0000922!1.26e-13!612;UBERON:0000467!1.37e-13!625;UBERON:0000480!2.86e-13!626;UBERON:0002100!7.44e-13!216;UBERON:0002050!8.39e-12!605;UBERON:0005423!8.39e-12!605;UBERON:0000923!1.21e-11!604;UBERON:0005291!1.21e-11!604;UBERON:0006598!1.21e-11!604;UBERON:0002532!1.21e-11!604;UBERON:0005256!1.05e-10!143;UBERON:0000926!1.40e-10!448;UBERON:0004120!1.40e-10!448;UBERON:0006603!1.40e-10!448;UBERON:0003102!1.85e-09!95;UBERON:0000914!4.46e-09!83;UBERON:0002329!4.46e-09!83;UBERON:0003077!4.46e-09!83;UBERON:0003059!4.46e-09!83;UBERON:0007282!4.46e-09!83;UBERON:0009618!4.46e-09!83;UBERON:0007285!4.46e-09!83;UBERON:0000475!4.72e-09!365;UBERON:0000062!4.31e-08!511;UBERON:0003104!5.65e-08!238;UBERON:0009142!5.65e-08!238;UBERON:0004119!1.43e-07!169;UBERON:0000925!1.43e-07!169;UBERON:0006595!1.43e-07!169;UBERON:0000481!2.64e-07!347;UBERON:0002204!2.68e-07!167;UBERON:0000486!4.08e-07!82;UBERON:0001007!4.51e-07!155;UBERON:0001555!4.51e-07!155;UBERON:0007026!4.51e-07!155 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.23e-10,99;UBERON:0002100,3.49e-09,199;UBERON:0000922,9.25e-09,592;UBERON:0003104,3.12e-08,160;UBERON:0009142,3.12e-08,160;UBERON:0005256,3.23e-08,122;UBERON:0002204,9.56e-08,167;UBERON:0005423,1.04e-07,581;UBERON:0002050,1.24e-07,564;UBERON:0000486,2.42e-07,83;UBERON:0000923,4.14e-07,560;UBERON:0010316,4.14e-07,560;UBERON:0005291,4.14e-07,560;UBERON:0006598,4.14e-07,560;UBERON:0010317,4.14e-07,560;UBERON:0002532,4.14e-07,560 | |||
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| ||
|short_description=p3@TGIF1 | |short_description=p3@TGIF1 | ||
}} | }} |
Latest revision as of 10:27, 19 September 2015
Short description: | p3@TGIF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TGIF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000330513, ENST00000345133_5end |
EntrezGene: | TGIF1 |
HGNC: | 11776 |
UniProt: | Q15583A6NE42 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 9.63e-13 | 250 |
fibroblast | 1.87e-11 | 76 |
electrically responsive cell | 1.64e-08 | 61 |
electrically active cell | 1.64e-08 | 61 |
muscle precursor cell | 1.76e-07 | 58 |
myoblast | 1.76e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.76e-07 | 58 |
smooth muscle cell | 1.95e-07 | 43 |
smooth muscle myoblast | 1.95e-07 | 43 |
muscle cell | 4.07e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.23e-10 | 99 |
trunk | 3.49e-09 | 199 |
embryo | 9.25e-09 | 592 |
mesenchyme | 3.12e-08 | 160 |
entire embryonic mesenchyme | 3.12e-08 | 160 |
trunk mesenchyme | 3.23e-08 | 122 |
musculoskeletal system | 9.56e-08 | 167 |
developing anatomical structure | 1.04e-07 | 581 |
embryonic structure | 1.24e-07 | 564 |
multilaminar epithelium | 2.42e-07 | 83 |
germ layer | 4.14e-07 | 560 |
germ layer / neural crest | 4.14e-07 | 560 |
embryonic tissue | 4.14e-07 | 560 |
presumptive structure | 4.14e-07 | 560 |
germ layer / neural crest derived structure | 4.14e-07 | 560 |
epiblast (generic) | 4.14e-07 | 560 |