FFCP PHASE1:Hg19::chr11:65430554..65430579,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9955 | |||
|TSSclassifier=strong | |||
|UniProt=Q04206 | |||
|association_with_transcript=0bp_to_ENST00000308639,ENST00000406246_5end | |||
|cluster_id=chr11:65430554..65430579,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_3_at_RELA_5end | |||
|id=chr11:65430554..65430579,- | |||
|ontology_enrichment_celltype=CL:0000222!8.85e-17!119;CL:0002057!3.65e-15!42;CL:0000860!4.05e-14!45;CL:0000213!1.07e-13!57;CL:0000215!1.07e-13!57;CL:0002139!1.22e-12!24;CL:0002078!1.28e-12!44;CL:0002371!1.22e-11!591;CL:0000115!4.25e-11!35;CL:0000144!6.96e-11!625;CL:0000012!1.64e-10!682;CL:0000548!2.78e-10!679;CL:0000004!2.78e-10!679;CL:0000255!2.78e-10!679;CL:0000071!9.95e-10!18;CL:0002546!9.95e-10!18;CL:0000076!2.60e-09!62;CL:0000063!3.70e-09!578;CL:0000766!8.66e-09!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.39e-16;33!CL:0002057;2.39e-16;33!CL:0002139;2.72e-13;24!CL:0000115;2.00e-10;36!CL:0000071;3.05e-10;18!CL:0002078;1.15e-09;45!CL:0000473;1.26e-09;39!CL:0000234;1.26e-09;39!CL:0000213;9.01e-09;58!CL:0000215;9.01e-09;58!CL:0000576;1.21e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.92e-17,121;CL:0000213,1.91e-15,58;CL:0000215,1.91e-15,58;CL:0000860,2.39e-15,42;CL:0002057,2.39e-15,42;CL:0002078,3.95e-14,45;CL:0002139,2.66e-13,24;CL:0000115,1.50e-12,36;CL:0000473,3.53e-11,48;CL:0000234,3.53e-11,48;CL:0000766,1.33e-10,72;CL:0000071,3.24e-10,18;CL:0002546,3.24e-10,18;CL:0000076,2.51e-09,63;CL:0000557,4.44e-08,67;CL:0002009,9.83e-08,61;CL:0000839,3.77e-07,66;CL:0002194,5.85e-07,59;CL:0000576,5.85e-07,59;CL:0000040,5.85e-07,59;CL:0000559,5.85e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;1.63e-12;42!CL:0002546;3.05e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!4.53e-17!69;UBERON:0003081!1.01e-16!216;UBERON:0002049!1.51e-14!79;UBERON:0007798!1.51e-14!79;UBERON:0001981!2.79e-14!60;UBERON:0007500!2.79e-14!60;UBERON:0004537!2.79e-14!60;UBERON:0006965!2.79e-14!60;UBERON:0004872!1.22e-13!84;UBERON:0003914!3.63e-13!118;UBERON:0001009!1.89e-12!113;UBERON:0004535!2.93e-12!110;UBERON:0001637!1.27e-10!42;UBERON:0003509!1.27e-10!42;UBERON:0004572!1.27e-10!42;UBERON:0000926!5.57e-10!448;UBERON:0004120!5.57e-10!448;UBERON:0006603!5.57e-10!448;UBERON:0001986!9.95e-10!18;UBERON:0004638!9.95e-10!18;UBERON:0004852!9.95e-10!18;UBERON:0002204!3.86e-08!167;UBERON:0000487!4.82e-08!22;UBERON:0006914!7.71e-08!25;UBERON:0004573!7.84e-08!33;UBERON:0004571!7.84e-08!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.05e-10;18!UBERON:0001986;3.05e-10;18!UBERON:0004852;3.05e-10;18!UBERON:0000055;1.13e-09;65!UBERON:0003914;1.76e-08;74!UBERON:0001637;2.32e-08;42!UBERON:0003509;2.32e-08;42!UBERON:0004572;2.32e-08;42!UBERON:0007500;3.07e-08;56!UBERON:0001981;3.07e-08;56!UBERON:0004537;3.07e-08;56!UBERON:0000487;3.11e-08;22!UBERON:0006914;5.03e-08;25!UBERON:0004573;2.68e-07;33!UBERON:0004571;2.68e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.00e-17,68;UBERON:0003081,5.17e-16,203;UBERON:0007500,9.99e-15,59;UBERON:0001981,9.99e-15,59;UBERON:0004537,9.99e-15,59;UBERON:0006965,9.99e-15,59;UBERON:0002049,3.67e-14,78;UBERON:0007798,3.67e-14,78;UBERON:0004872,7.53e-14,83;UBERON:0003914,2.32e-13,117;UBERON:0001009,5.27e-12,112;UBERON:0004535,8.45e-12,109;UBERON:0000926,2.65e-11,315;UBERON:0004120,2.65e-11,315;UBERON:0006603,2.65e-11,315;UBERON:0001637,1.19e-10,42;UBERON:0003509,1.19e-10,42;UBERON:0004572,1.19e-10,42;UBERON:0004638,3.24e-10,18;UBERON:0001986,3.24e-10,18;UBERON:0004852,3.24e-10,18;UBERON:0000487,2.75e-08,22;UBERON:0002204,3.91e-08,167;UBERON:0006914,4.54e-08,25;UBERON:0002405,7.58e-08,93;UBERON:0004573,9.96e-08,33;UBERON:0004571,9.96e-08,33;UBERON:0002371,4.61e-07,76 | |||
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| |||
|short_description=p3@RELA | |||
}} |
Latest revision as of 10:40, 19 September 2015
Short description: | p3@RELA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RELA_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000308639, ENST00000406246_5end |
EntrezGene: | RELA |
HGNC: | 9955 |
UniProt: | Q04206 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.92e-17 | 121 |
lining cell | 1.91e-15 | 58 |
barrier cell | 1.91e-15 | 58 |
classical monocyte | 2.39e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.39e-15 | 42 |
meso-epithelial cell | 3.95e-14 | 45 |
endothelial cell of vascular tree | 2.66e-13 | 24 |
endothelial cell | 1.50e-12 | 36 |
defensive cell | 3.53e-11 | 48 |
phagocyte | 3.53e-11 | 48 |
myeloid leukocyte | 1.33e-10 | 72 |
blood vessel endothelial cell | 3.24e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.24e-10 | 18 |
squamous epithelial cell | 2.51e-09 | 63 |
granulocyte monocyte progenitor cell | 4.44e-08 | 67 |
macrophage dendritic cell progenitor | 9.83e-08 | 61 |
myeloid lineage restricted progenitor cell | 3.77e-07 | 66 |
monopoietic cell | 5.85e-07 | 59 |
monocyte | 5.85e-07 | 59 |
monoblast | 5.85e-07 | 59 |
promonocyte | 5.85e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.00e-17 | 68 |
lateral plate mesoderm | 5.17e-16 | 203 |
epithelial tube open at both ends | 9.99e-15 | 59 |
blood vessel | 9.99e-15 | 59 |
blood vasculature | 9.99e-15 | 59 |
vascular cord | 9.99e-15 | 59 |
vasculature | 3.67e-14 | 78 |
vascular system | 3.67e-14 | 78 |
splanchnic layer of lateral plate mesoderm | 7.53e-14 | 83 |
epithelial tube | 2.32e-13 | 117 |
circulatory system | 5.27e-12 | 112 |
cardiovascular system | 8.45e-12 | 109 |
mesoderm | 2.65e-11 | 315 |
mesoderm-derived structure | 2.65e-11 | 315 |
presumptive mesoderm | 2.65e-11 | 315 |
artery | 1.19e-10 | 42 |
arterial blood vessel | 1.19e-10 | 42 |
arterial system | 1.19e-10 | 42 |
blood vessel endothelium | 3.24e-10 | 18 |
endothelium | 3.24e-10 | 18 |
cardiovascular system endothelium | 3.24e-10 | 18 |
simple squamous epithelium | 2.75e-08 | 22 |
musculoskeletal system | 3.91e-08 | 167 |
squamous epithelium | 4.54e-08 | 25 |
immune system | 7.58e-08 | 93 |
systemic artery | 9.96e-08 | 33 |
systemic arterial system | 9.96e-08 | 33 |
bone marrow | 4.61e-07 | 76 |