FFCP PHASE1:Hg19::chr4:96012706..96012728,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=658 | |EntrezGene=658 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1077 | |HGNC=1077 | ||
|TSSclassifier=strong | |||
|UniProt=O00238 | |UniProt=O00238 | ||
|association_with_transcript=64bp_to_ENST00000264568,uc010ilb.2_5end | |association_with_transcript=64bp_to_ENST00000264568,uc010ilb.2_5end | ||
|cluster_id=chr4:96012706..96012728,+ | |||
|coexpression_cluster_id=C28 | |coexpression_cluster_id=C28 | ||
|description=CAGE_peak_10_at_BMPR1B_5end | |description=CAGE_peak_10_at_BMPR1B_5end | ||
|id=chr4:96012706..96012728,+ | |id=chr4:96012706..96012728,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;3.58e-26;1!UBERON:0007297;8.28e-14;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.82e-13!57;UBERON:0005068!4.82e-13!57;UBERON:0006241!4.82e-13!57;UBERON:0007135!4.82e-13!57;UBERON:0007023!1.15e-10!115;UBERON:0003075!2.32e-10!86;UBERON:0007284!2.32e-10!86;UBERON:0000073!2.46e-10!94;UBERON:0001016!2.46e-10!94;UBERON:0001950!2.89e-10!20;UBERON:0005743!3.25e-10!86;UBERON:0002346!9.34e-10!90;UBERON:0002791!9.78e-10!33;UBERON:0002021!1.68e-09!5;UBERON:0002020!1.79e-09!34;UBERON:0003528!1.79e-09!34;UBERON:0001017!1.95e-09!82;UBERON:0001893!2.05e-09!34;UBERON:0002619!2.71e-09!22;UBERON:0002616!6.41e-09!59;UBERON:0000153!7.48e-09!129;UBERON:0007811!7.48e-09!129;UBERON:0000955!1.60e-08!69;UBERON:0006238!1.60e-08!69;UBERON:0000956!4.08e-08!25;UBERON:0000203!4.08e-08!25;UBERON:0001869!5.65e-08!32;UBERON:0003076!7.01e-08!15;UBERON:0003057!7.01e-08!15;UBERON:0006947!7.21e-08!3;UBERON:0004054!7.21e-08!3;UBERON:0002780!1.35e-07!41;UBERON:0001890!1.35e-07!41;UBERON:0006240!1.35e-07!41;UBERON:0002240!1.44e-07!3;UBERON:0003080!2.19e-07!42;UBERON:0001896!3.53e-07!3;UBERON:0005290!3.53e-07!3;UBERON:0010096!3.53e-07!3;UBERON:0003056!4.83e-07!61;UBERON:0004177!5.93e-07!7 | |ontology_enrichment_uberon=UBERON:0001049!4.82e-13!57;UBERON:0005068!4.82e-13!57;UBERON:0006241!4.82e-13!57;UBERON:0007135!4.82e-13!57;UBERON:0007023!1.15e-10!115;UBERON:0003075!2.32e-10!86;UBERON:0007284!2.32e-10!86;UBERON:0000073!2.46e-10!94;UBERON:0001016!2.46e-10!94;UBERON:0001950!2.89e-10!20;UBERON:0005743!3.25e-10!86;UBERON:0002346!9.34e-10!90;UBERON:0002791!9.78e-10!33;UBERON:0002021!1.68e-09!5;UBERON:0002020!1.79e-09!34;UBERON:0003528!1.79e-09!34;UBERON:0001017!1.95e-09!82;UBERON:0001893!2.05e-09!34;UBERON:0002619!2.71e-09!22;UBERON:0002616!6.41e-09!59;UBERON:0000153!7.48e-09!129;UBERON:0007811!7.48e-09!129;UBERON:0000955!1.60e-08!69;UBERON:0006238!1.60e-08!69;UBERON:0000956!4.08e-08!25;UBERON:0000203!4.08e-08!25;UBERON:0001869!5.65e-08!32;UBERON:0003076!7.01e-08!15;UBERON:0003057!7.01e-08!15;UBERON:0006947!7.21e-08!3;UBERON:0004054!7.21e-08!3;UBERON:0002780!1.35e-07!41;UBERON:0001890!1.35e-07!41;UBERON:0006240!1.35e-07!41;UBERON:0002240!1.44e-07!3;UBERON:0003080!2.19e-07!42;UBERON:0001896!3.53e-07!3;UBERON:0005290!3.53e-07!3;UBERON:0010096!3.53e-07!3;UBERON:0003056!4.83e-07!61;UBERON:0004177!5.93e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;8.82e-51;2!UBERON:0005058;8.82e-51;2!UBERON:0009113;8.82e-51;2!UBERON:0006947;7.69e-34;3!UBERON:0004054;7.69e-34;3!UBERON:0000998;3.58e-26;1!UBERON:0006868;3.58e-26;1!UBERON:0001000;7.62e-26;1!UBERON:0005352;7.62e-26;1!UBERON:0005904;1.11e-25;4!UBERON:0000058;6.92e-23;10!UBERON:0004177;4.91e-21;5!UBERON:0005057;4.91e-21;5!UBERON:0000341;1.21e-13;2!UBERON:0003135;5.29e-10;11!UBERON:0002394;1.80e-07;4!UBERON:0003928;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,9.10e-34,3;UBERON:0004054,9.10e-34,3;UBERON:0000998,3.58e-26,1;UBERON:0006868,3.58e-26,1;UBERON:0002370,5.23e-26,4;UBERON:0005058,5.23e-26,4;UBERON:0009113,5.23e-26,4;UBERON:0003295,5.23e-26,4;UBERON:0005562,5.23e-26,4;UBERON:0001000,9.79e-26,1;UBERON:0005352,9.79e-26,1;UBERON:0005904,1.26e-25,4;UBERON:0000974,4.42e-23,10;UBERON:0003351,1.03e-17,6;UBERON:0004177,2.47e-15,7;UBERON:0005057,2.47e-15,7;UBERON:0000341,1.21e-13,2;UBERON:0000058,1.99e-12,19;UBERON:0003408,4.89e-11,10;UBERON:0001042,4.89e-11,10;UBERON:0009145,4.89e-11,10;UBERON:0006562,4.03e-10,11;UBERON:0009722,4.03e-10,11;UBERON:0007690,4.03e-10,11;UBERON:0003135,5.54e-10,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,1.79021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,1.57833761139756,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0.319267718114302,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,2.11693525095465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0.0644578879735772,0,0.71421575442263,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66645102024618,12.7886041475292,13.2219141450177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7658523976586,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102268682502155,0,0,0,1.79021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,1.57833761139756,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.240476460754601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0.0642292250964595,1.41696576325585,0.319267718114302,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0.173858272302579,0,0,0,0,0,0,0,2.11693525095465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.4226557275834,0,0,0.0644578879735772,0,0.71421575442263,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66645102024618,12.7886041475292,13.2219141450177,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | ||
|short_description=p10@BMPR1B | |short_description=p10@BMPR1B | ||
}} | }} |
Latest revision as of 10:49, 19 September 2015
Short description: | p10@BMPR1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_BMPR1B_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 64bp_to_ENST00000264568, uc010ilb.2_5end |
EntrezGene: | BMPR1B |
HGNC: | 1077 |
UniProt: | O00238 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 9.10e-34 | 3 |
internal male genitalia | 9.10e-34 | 3 |
seminal vesicle | 3.58e-26 | 1 |
seminal fluid secreting gland | 3.58e-26 | 1 |
thymus | 5.23e-26 | 4 |
hemolymphoid system gland | 5.23e-26 | 4 |
thymic region | 5.23e-26 | 4 |
pharyngeal gland | 5.23e-26 | 4 |
thymus primordium | 5.23e-26 | 4 |
vas deferens | 9.79e-26 | 1 |
spermatic cord | 9.79e-26 | 1 |
duct of male reproductive system | 1.26e-25 | 4 |
neck | 4.42e-23 | 10 |
pharyngeal epithelium | 1.03e-17 | 6 |
hemopoietic organ | 2.47e-15 | 7 |
immune organ | 2.47e-15 | 7 |
throat | 1.21e-13 | 2 |
duct | 1.99e-12 | 19 |
gland of gut | 4.89e-11 | 10 |
chordate pharynx | 4.89e-11 | 10 |
pharyngeal region of foregut | 4.89e-11 | 10 |
pharynx | 4.03e-10 | 11 |
entire pharyngeal arch endoderm | 4.03e-10 | 11 |
early pharyngeal endoderm | 4.03e-10 | 11 |
male reproductive organ | 5.54e-10 | 11 |