FFCP PHASE2:Hg19::chr19:50868888..50868902,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9476 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:13395 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9476 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=13395 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O96009 | ||
|association_with_transcript=28bp_to_ENST00000253719,NM_004851,uc002prx.2_5end | |association_with_transcript=28bp_to_ENST00000253719,NM_004851,uc002prx.2_5end | ||
|cluster_id=chr19:50868888..50868902,- | |cluster_id=chr19:50868888..50868902,- |
Latest revision as of 10:58, 19 September 2015
Short description: | p1@NAPSA |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NAPSA_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | 28bp_to_ENST00000253719, NM_004851, uc002prx.2_5end |
EntrezGene: | NAPSA |
HGNC: | 13395 |
UniProt: | O96009 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@NAPSA |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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lymphocyte of B lineage | 4.78e-14 | 24 |
pro-B cell | 4.78e-14 | 24 |
plasmacytoid dendritic cell | 1.32e-10 | 3 |
serous secreting cell | 5.28e-09 | 1 |
lymphoid lineage restricted progenitor cell | 7.89e-08 | 52 |
lymphocyte | 1.16e-07 | 53 |
common lymphoid progenitor | 1.16e-07 | 53 |
Showing 1 to 7 of 7 entries
Ontology term | p-value | n |
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lower lobe of right lung | 3.31e-09 | 1 |
right lung lobe | 3.31e-09 | 1 |
lower lobe of lung | 3.31e-09 | 1 |
lobe of lung | 3.31e-09 | 1 |
right lung | 3.31e-09 | 1 |
epithelium of female gonad | 5.28e-09 | 1 |
epididymis | 5.70e-09 | 1 |
lung | 1.66e-08 | 22 |
respiratory tube | 1.66e-08 | 22 |
respiration organ | 1.66e-08 | 22 |
Showing 1 to 10 of 14 entries
Ontology term | p-value | n |
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ovary epithelial cancer | 5.28e-09 | 1 |
genetic disease | 1.78e-08 | 1 |
monogenic disease | 1.78e-08 | 1 |
xeroderma pigmentosum | 1.78e-08 | 1 |
non-small cell lung carcinoma | 8.66e-07 | 5 |
Showing 1 to 5 of 5 entries