FFCP PHASE1:Hg19::chr4:96470557..96470642,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:96470557..96470642,- to FFCP PHASE1:Hg19::chr4:96470557..96470642,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8633 | |EntrezGene=8633 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12569 | |HGNC=12569 | ||
|TSSclassifier=strong | |||
|UniProt=A8K385,O95185 | |UniProt=A8K385,O95185 | ||
|association_with_transcript=-196bp_to_NM_003728_5end | |||
|cluster_id=chr4:96470557..96470642,- | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_4_at_UNC5C_5end | |||
|id=chr4:96470557..96470642,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.79e-07;3!CL:0000067;1.79e-07;3!CL:0005012;1.79e-07;3!CL:0002304;1.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,2.26e-07,3;CL:0000067,2.26e-07,3;CL:0005012,2.26e-07,3;CL:0002304,2.26e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.29e-22;82!UBERON:0006241;3.76e-07;3!UBERON:0003057;3.76e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.29e-55!115;UBERON:0001049!1.97e-48!57;UBERON:0005068!1.97e-48!57;UBERON:0006241!1.97e-48!57;UBERON:0007135!1.97e-48!57;UBERON:0000955!4.61e-43!69;UBERON:0006238!4.61e-43!69;UBERON:0003075!4.78e-43!86;UBERON:0007284!4.78e-43!86;UBERON:0001017!6.51e-43!82;UBERON:0000073!5.01e-42!94;UBERON:0001016!5.01e-42!94;UBERON:0002616!1.77e-41!59;UBERON:0005743!1.80e-41!86;UBERON:0002346!6.39e-40!90;UBERON:0003080!4.00e-35!42;UBERON:0002780!1.74e-34!41;UBERON:0001890!1.74e-34!41;UBERON:0006240!1.74e-34!41;UBERON:0001893!3.03e-30!34;UBERON:0002020!3.85e-30!34;UBERON:0003528!3.85e-30!34;UBERON:0003056!1.70e-29!61;UBERON:0002791!3.09e-29!33;UBERON:0001869!1.97e-28!32;UBERON:0000153!6.08e-26!129;UBERON:0007811!6.08e-26!129;UBERON:0000033!9.35e-25!123;UBERON:0002619!2.05e-23!22;UBERON:0004121!1.03e-21!169;UBERON:0001950!1.84e-21!20;UBERON:0000956!6.04e-21!25;UBERON:0000203!6.04e-21!25;UBERON:0000924!1.48e-20!173;UBERON:0006601!1.48e-20!173;UBERON:0003076!4.92e-14!15;UBERON:0003057!4.92e-14!15;UBERON:0000025!1.70e-13!194;UBERON:0000477!2.81e-12!286;UBERON:0004732!4.44e-12!13;UBERON:0004111!1.07e-11!241;UBERON:0004733!2.58e-11!12;UBERON:0002028!2.58e-11!12;UBERON:0007277!2.58e-11!12;UBERON:0002420!5.87e-11!9;UBERON:0007245!5.87e-11!9;UBERON:0010009!5.87e-11!9;UBERON:0010011!5.87e-11!9;UBERON:0000454!5.87e-11!9;UBERON:0002308!9.96e-11!9;UBERON:0000125!9.96e-11!9;UBERON:0000062!1.28e-09!511;UBERON:0001871!2.53e-09!7;UBERON:0009663!5.56e-09!7;UBERON:0000064!8.95e-09!219;UBERON:0002298!1.16e-08!8;UBERON:0002680!1.53e-08!9;UBERON:0001895!1.53e-08!9;UBERON:0010092!1.53e-08!9;UBERON:0000483!3.07e-08!309;UBERON:0000119!6.53e-08!312;UBERON:0000200!1.13e-07!6;UBERON:0000481!2.67e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.02e-46;32!UBERON:0002791;2.65e-46;32!UBERON:0001893;3.64e-46;34!UBERON:0003528;8.38e-46;34!UBERON:0002020;8.38e-46;34!UBERON:0002780;6.45e-44;41!UBERON:0001890;6.45e-44;41!UBERON:0002619;3.44e-42;22!UBERON:0000073;3.99e-39;53!UBERON:0002616;3.99e-39;53!UBERON:0001950;3.12e-38;20!UBERON:0000956;1.64e-36;25!UBERON:0000203;1.64e-36;25!UBERON:0001017;7.15e-30;75!UBERON:0000955;3.18e-28;68!UBERON:0001016;7.03e-24;83!UBERON:0002420;3.79e-20;9!UBERON:0007245;3.79e-20;9!UBERON:0010009;3.79e-20;9!UBERON:0010011;3.79e-20;9!UBERON:0000454;3.79e-20;9!UBERON:0000125;1.25e-19;9!UBERON:0002308;1.25e-19;9!UBERON:0009663;2.69e-16;7!UBERON:0007023;4.84e-16;114!UBERON:0001871;7.61e-15;6!UBERON:0004732;3.97e-14;13!UBERON:0000200;7.44e-14;6!UBERON:0004733;1.10e-12;12!UBERON:0002028;1.10e-12;12!UBERON:0002298;1.23e-12;6!UBERON:0000349;1.24e-11;5!UBERON:0002021;1.85e-11;5!UBERON:0011216;1.27e-10;132!UBERON:0000369;1.57e-10;4!UBERON:0002435;1.57e-10;4!UBERON:0000204;1.57e-10;4!UBERON:0002784;1.95e-09;4!UBERON:0010314;4.50e-09;132!UBERON:0005383;2.54e-08;3!UBERON:0005382;2.54e-08;3!UBERON:0001894;5.02e-08;7!UBERON:0002680;8.62e-08;9!UBERON:0001895;8.62e-08;9!UBERON:0001870;1.12e-07;3!UBERON:0001778;1.79e-07;3!UBERON:0001775;1.79e-07;3!UBERON:0001872;1.85e-07;5!UBERON:0001896;3.76e-07;3!UBERON:0002240;3.76e-07;3!UBERON:0005174;3.76e-07;3!UBERON:0005290;3.76e-07;3!UBERON:0001137;3.76e-07;3!UBERON:0000988;3.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.53e-79,56;UBERON:0005068,5.53e-79,56;UBERON:0006241,5.53e-79,56;UBERON:0007135,5.53e-79,56;UBERON:0003075,2.70e-75,82;UBERON:0007284,2.70e-75,82;UBERON:0000073,3.11e-73,53;UBERON:0002616,3.11e-73,53;UBERON:0002346,4.85e-71,86;UBERON:0000955,3.78e-67,68;UBERON:0006238,3.78e-67,68;UBERON:0001017,9.83e-65,81;UBERON:0001016,2.26e-64,89;UBERON:0002780,2.23e-61,41;UBERON:0001890,2.23e-61,41;UBERON:0003080,2.23e-61,41;UBERON:0006240,2.23e-61,41;UBERON:0007023,3.49e-56,114;UBERON:0010371,6.37e-56,104;UBERON:0003056,6.67e-56,61;UBERON:0001893,5.30e-55,34;UBERON:0003528,8.40e-55,34;UBERON:0002020,8.40e-55,34;UBERON:0001869,2.27e-51,32;UBERON:0002791,3.73e-51,32;UBERON:0010314,5.94e-48,132;UBERON:0002619,3.45e-42,22;UBERON:0004121,6.81e-40,171;UBERON:0000924,6.81e-40,171;UBERON:0006601,6.81e-40,171;UBERON:0001950,2.84e-38,20;UBERON:0000956,1.64e-36,25;UBERON:0000203,1.64e-36,25;UBERON:0011216,5.73e-25,223;UBERON:0002420,2.46e-20,9;UBERON:0007245,2.46e-20,9;UBERON:0010009,2.46e-20,9;UBERON:0010011,2.46e-20,9;UBERON:0000454,2.46e-20,9;UBERON:0000125,7.08e-20,9;UBERON:0002308,7.08e-20,9;UBERON:0000025,1.99e-18,192;UBERON:0003076,5.80e-18,15;UBERON:0003057,5.80e-18,15;UBERON:0009663,2.20e-16,7;UBERON:0004111,1.15e-15,240;UBERON:0001871,5.88e-15,6;UBERON:0004732,2.59e-14,13;UBERON:0000200,8.83e-14,6;UBERON:0000483,4.64e-13,306;UBERON:0002298,7.10e-13,6;UBERON:0004733,7.55e-13,12;UBERON:0002028,7.55e-13,12;UBERON:0007277,7.55e-13,12;UBERON:0000119,8.94e-13,309;UBERON:0000349,1.13e-11,5;UBERON:0002021,2.07e-11,5;UBERON:0000369,1.54e-10,4;UBERON:0002435,1.54e-10,4;UBERON:0000204,1.54e-10,4;UBERON:0010082,1.54e-10,4;UBERON:0002784,2.28e-09,4;UBERON:0005383,2.41e-08,3;UBERON:0005382,2.41e-08,3;UBERON:0000922,2.45e-08,592;UBERON:0002050,4.10e-08,564;UBERON:0001894,5.64e-08,7;UBERON:0006222,5.64e-08,7;UBERON:0002680,7.08e-08,9;UBERON:0001895,7.08e-08,9;UBERON:0010092,7.08e-08,9;UBERON:0000923,8.33e-08,560;UBERON:0010316,8.33e-08,560;UBERON:0005291,8.33e-08,560;UBERON:0006598,8.33e-08,560;UBERON:0010317,8.33e-08,560;UBERON:0002532,8.33e-08,560;UBERON:0005423,9.60e-08,581;UBERON:0001870,1.12e-07,3;UBERON:0001872,2.00e-07,5;UBERON:0001778,2.26e-07,3;UBERON:0001775,2.26e-07,3;UBERON:0000988,2.74e-07,3;UBERON:0001896,3.05e-07,3;UBERON:0005290,3.05e-07,3;UBERON:0010096,3.05e-07,3;UBERON:0002240,4.19e-07,3;UBERON:0005174,4.19e-07,3;UBERON:0001137,4.19e-07,3 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492484232307152,0.612002073732759,0.940364164434263,0,0.136874425072884,0,1.22261449196722,0.738905305049512,0.472264687882075,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0.306083892370903,0.641858054152187,0.639337125799041,0,0.199463657621632,0.426224750532694,0,1.13477044938228,0,0,0,0,0,0.368277635987565,1.26584954976354,0,0,0,0,0,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,4.06499713805492,5.09977614163897,2.19586964232815,1.37528029272598,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0,0,0,0,0.66944122552934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573673241497627,0,0,0,0.24666754841716,1.24484414159907,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.686271241194102,0,0,0,0,0,0,0,1.62302566965108,1.40890433082986,0,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0.602878754119172,0,0.699810938274399,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0.24538298343828,0,0,0,0,0,0,0.601892199455438,0,0,1.32845119707087,0.184369168541703,0,0.783204629850962,0.686286847621712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116210378459959,0,0,0,0.459257792658427,1.27463817604702,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,1.35473218771926,0,0,0,0.223874754722178,0,0,0,0,0,0.206082023295445,0.732555718546747,0.82509499920588,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0.632758849437452,0,0,0.42793898803392,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,2.51058146936511,0.156679895773023,0,0,1.2847046008296,0.605399121573143,0,0,0,0.447352215784832,0,0.390776190804081,0,1.23087398947712,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0,0,0,2.98244294329889,7.7368179025782,0,0,0,0.597743964753209,1.10513566212459,0,0,0,0,0,0,1.53471711068062,0.789147245095469,0,0,3.87733098438087,1.94813006139888,0,0,0,0.724999575434793,0,0,0,0.344743373241465,0,0.173624994933292,7.97167247232455,39.314438991883,1.52581736317083,2.43274371848694,2.06883333267483,4.16832254592548,0,0,0.692552326534174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0.611030144933625,0.296521128680622,0.247127877893006,0.104421949505455,2.76344645220776,0,4.45102446878144,0,0,0,1.57833761139756,2.41981432097328,2.44858209304392,0.252746318513952,0.300646838828985,0.103688191397247,0,0,0,0,0,0.138674673013139,0.347119476670262,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,5.42353777873278,0,0,3.54540457352921,0,0,1.06726497369676,0,0,0,0,0,0,0,0.951329442515298,2.09205692624666,0,1.15580235960608,8.40588404193705,3.9702559878678,0,0.429765441419957,0,1.67569440763353,1.3749625440701,1.43574604915363,0.199679000498991,0,0.669514372325618,0.335917362433631,0,0,0,0,0,0,0,3.18091875923721,4.494712401682,0,0,0,0,0,4.61696630600987,0,0.236417121897595,1.15400093896996,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,3.74920573448497,1.71902382265497,0,0,0.213574825135389,0.943225830597996,0.414239055347196,0.496166021811951,0,0,0,0,0,1.53172788381731,0.983617892129413,0,4.43034089983493,4.75902433117656,6.88550118885749,2.86704597845036,3.21694249456872,3.78788057942439,7.33247765162023,0.124980407962107,0,0,0,0,0,0.149254802886874,0.233713309847224,0,0.189403005275089,0.754703705257725,0,0.228840068396924,0.604923695052956,0,0,0,0,0,0.414706207840855,0,0.521745061811734,0.901545653983311,0,0,0,0.322231671127465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.46595555219346,0,0.531459361253452,0.163565394255844,0,0.245772908753719,0,0.19998739585493,0.853533837553127,0,0,0,0,0,0.255788742607303,10.2433570826848,0.157265941855896,2.83945059299236,0,0,0,0,0,0,0,0,3.062454773532,8.28557003744328,7.08482881627925,8.93949610720047,5.74325819874114,1.26035848110859,3.73449163306777,5.49017195148294,1.42769420259154,0,0,0,0,0,0,0,0.82731361184183,0,0,0,0,0,4.05225507710368,2.34323429584154,8.68084545304973,3.7415328014405,0.546974809018219,0,0,0,0,4.82131652290458,2.01770233331294,0,0.455324382702595,0.0887023701626388,0,0,6.86494303066,3.15709313101676,0,0,0.941917114206168,16.3400213512642,0,0.913158720509496,0,0,4.50302228312935,0,2.20858708199438,0,0,0,0,0,0.860454717640555,0,0,1.69354820076372,0.68732060563215,0,0,0,0,0,0,0,0,0,0,0,0.118920090777569,0,0.659643100472575,0,0.385870790539723,0.874238242015829,0,1.96118657403124,0,3.14093547383912,3.26751040359795,2.5359343655004,0,0.281951753939561,0.257831551894309,0.299823467774787,0,0,0.080241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| ||
|short_description=p4@UNC5C | |||
}} | }} |
Latest revision as of 11:07, 19 September 2015
Short description: | p4@UNC5C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_UNC5C_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -196bp_to_NM_003728_5end |
EntrezGene: | UNC5C |
HGNC: | 12569 |
UniProt: | A8K385O95185 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 2.26e-07 | 3 |
ciliated epithelial cell | 2.26e-07 | 3 |
multi-ciliated epithelial cell | 2.26e-07 | 3 |
non-pigmented ciliary epithelial cell | 2.26e-07 | 3 |