FFCP PHASE1:Hg19::chrX:131540410..131540438,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55796 | |EntrezGene=55796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=20564 | |HGNC=20564 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc004ews.2_5end | |association_with_transcript=0bp_to_uc004ews.2_5end | ||
|cluster_id=chrX:131540410..131540438,- | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_13_at_MBNL3_5end | |description=CAGE_peak_13_at_MBNL3_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.74e-21;12!CL:0002541;3.64e-10;3!CL:0002591;3.05e-08;1 | |ontology_enrichment_celltype_v019=CL:0000182;2.74e-21;12!CL:0002541;3.64e-10;3!CL:0002591;3.05e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.75e-21,12;CL:0002541,3.47e-10,3;CL:0002591,4.07e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.03e-16;11!UBERON:0009497;7.22e-14;13!UBERON:0003124;6.50e-09;1!UBERON:0003104;6.22e-08;31 | |ontology_enrichment_development_v019=UBERON:0004161;2.03e-16;11!UBERON:0009497;7.22e-14;13!UBERON:0003124;6.50e-09;1!UBERON:0003104;6.22e-08;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.29e-17!15;UBERON:0000179!3.29e-17!15;UBERON:0000463!3.29e-17!15;UBERON:0003135!6.13e-07!11 | |ontology_enrichment_uberon=UBERON:0000178!3.29e-17!15;UBERON:0000179!3.29e-17!15;UBERON:0000463!3.29e-17!15;UBERON:0003135!6.13e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.42e-23;19!UBERON:0006925;2.42e-23;19!UBERON:0000178;5.49e-23;15!UBERON:0000179;5.49e-23;15!UBERON:0000463;5.49e-23;15!UBERON:0002423;1.76e-17;25!UBERON:0002365;2.22e-13;31!UBERON:0002330;2.22e-13;31!UBERON:0002368;7.66e-12;33!UBERON:0003124;3.64e-10;3!UBERON:0000920;3.64e-10;3!UBERON:0002390;1.15e-09;32!UBERON:0000949;1.06e-08;43!UBERON:0001301;1.71e-08;1 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.42e-23;19!UBERON:0006925;2.42e-23;19!UBERON:0000178;5.49e-23;15!UBERON:0000179;5.49e-23;15!UBERON:0000463;5.49e-23;15!UBERON:0002423;1.76e-17;25!UBERON:0002365;2.22e-13;31!UBERON:0002330;2.22e-13;31!UBERON:0002368;7.66e-12;33!UBERON:0003124;3.64e-10;3!UBERON:0000920;3.64e-10;3!UBERON:0002390;1.15e-09;32!UBERON:0000949;1.06e-08;43!UBERON:0001301;1.71e-08;1 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.42e-23,19;UBERON:0006925,2.42e-23,19;UBERON:0008836,2.42e-23,19;UBERON:0000178,5.14e-23,15;UBERON:0000179,5.14e-23,15;UBERON:0000463,5.14e-23,15;UBERON:0008835,5.17e-20,22;UBERON:0003894,5.17e-20,22;UBERON:0009854,4.27e-19,23;UBERON:0007499,1.76e-17,25;UBERON:0009497,1.76e-17,25;UBERON:0000015,1.76e-17,25;UBERON:0002423,1.76e-17,25;UBERON:0006235,1.76e-17,25;UBERON:0004161,1.76e-17,25;UBERON:0009856,9.11e-17,26;UBERON:0002365,6.95e-14,31;UBERON:0002330,6.95e-14,31;UBERON:0002368,3.60e-12,35;UBERON:0003929,1.34e-11,54;UBERON:0000920,3.47e-10,3;UBERON:0003124,9.85e-10,7;UBERON:0005172,1.82e-09,54;UBERON:0005173,1.82e-09,54;UBERON:0000949,3.23e-09,45;UBERON:0001301,1.71e-08,1;UBERON:0002417,2.21e-08,60;UBERON:0000916,2.21e-08,60;UBERON:0005911,4.44e-07,82;UBERON:0007023,5.97e-07,114;UBERON:0002530,9.13e-07,59 | |||
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| ||
|short_description=p13@MBNL3 | |short_description=p13@MBNL3 | ||
}} | }} |
Latest revision as of 11:25, 19 September 2015
Short description: | p13@MBNL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_MBNL3_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_uc004ews.2_5end |
EntrezGene: | MBNL3 |
HGNC: | 20564 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.75e-21 | 12 |
chorionic membrane mesenchymal stem cell | 3.47e-10 | 3 |
smooth muscle cell of the pulmonary artery | 4.07e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 2.42e-23 | 19 |
digestive gland | 2.42e-23 | 19 |
liver bud | 2.42e-23 | 19 |
blood | 5.14e-23 | 15 |
haemolymphatic fluid | 5.14e-23 | 15 |
organism substance | 5.14e-23 | 15 |
hepatic diverticulum | 5.17e-20 | 22 |
liver primordium | 5.17e-20 | 22 |
digestive tract diverticulum | 4.27e-19 | 23 |
epithelial sac | 1.76e-17 | 25 |
epithelium of foregut-midgut junction | 1.76e-17 | 25 |
anatomical boundary | 1.76e-17 | 25 |
hepatobiliary system | 1.76e-17 | 25 |
foregut-midgut junction | 1.76e-17 | 25 |
septum transversum | 1.76e-17 | 25 |
sac | 9.11e-17 | 26 |
exocrine gland | 6.95e-14 | 31 |
exocrine system | 6.95e-14 | 31 |
endocrine gland | 3.60e-12 | 35 |
gut epithelium | 1.34e-11 | 54 |
egg chorion | 3.47e-10 | 3 |
chorion | 9.85e-10 | 7 |
abdomen element | 1.82e-09 | 54 |
abdominal segment element | 1.82e-09 | 54 |
endocrine system | 3.23e-09 | 45 |
epididymis | 1.71e-08 | 1 |
abdominal segment of trunk | 2.21e-08 | 60 |
abdomen | 2.21e-08 | 60 |
endo-epithelium | 4.44e-07 | 82 |
adult organism | 5.97e-07 | 114 |
gland | 9.13e-07 | 59 |