FFCP PHASE1:Hg19::chr7:73634762..73634776,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7462 | |EntrezGene=7462 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12749 | |HGNC=12749 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000490586_5end | |association_with_transcript=-11bp_to_ENST00000490586_5end | ||
|cluster_id=chr7:73634762..73634776,+ | |||
|coexpression_cluster_id=C242 | |||
|description=CAGE_peak_5_at_LAT2_5end | |description=CAGE_peak_5_at_LAT2_5end | ||
|id=chr7:73634762..73634776,+ | |id=chr7:73634762..73634776,+ | ||
|ontology_enrichment_celltype=CL:0000817!2.32e-13!3;CL:0000181!1.82e-12!12;CL:0000417!1.82e-12!12;CL:0000668!1.82e-12!12;CL:0000414!1.82e-12!12;CL:0000412!1.82e-12!12;CL:0000182!1.82e-12!12;CL:0000819!1.73e-10!1;CL:0001024!2.08e-10!1 | |ontology_enrichment_celltype=CL:0000817!2.32e-13!3;CL:0000181!1.82e-12!12;CL:0000417!1.82e-12!12;CL:0000668!1.82e-12!12;CL:0000414!1.82e-12!12;CL:0000412!1.82e-12!12;CL:0000182!1.82e-12!12;CL:0000819!1.73e-10!1;CL:0001024!2.08e-10!1 | ||
|ontology_enrichment_celltype_v019=CL:0000817;1.48e-40;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,1.60e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:74!7.16e-19!2;DOID:0060073!1.73e-10!1;DOID:8675!1.73e-10!1;DOID:225!1.89e-10!1;DOID:2355!3.61e-10!1;DOID:1287!6.54e-10!4 | |ontology_enrichment_disease=DOID:74!7.16e-19!2;DOID:0060073!1.73e-10!1;DOID:8675!1.73e-10!1;DOID:225!1.89e-10!1;DOID:2355!3.61e-10!1;DOID:1287!6.54e-10!4 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.93e-17!19;UBERON:0006925!5.93e-17!19;UBERON:0008836!5.93e-17!19;UBERON:0008835!1.38e-14!22;UBERON:0003894!1.38e-14!22;UBERON:0009854!6.19e-14!23;UBERON:0007499!8.72e-13!25;UBERON:0009497!8.72e-13!25;UBERON:0000015!8.72e-13!25;UBERON:0002423!8.72e-13!25;UBERON:0006235!8.72e-13!25;UBERON:0004161!8.72e-13!25;UBERON:0005057!2.81e-12!26;UBERON:0009856!2.81e-12!26;UBERON:0002365!3.17e-10!31;UBERON:0002330!3.17e-10!31;UBERON:0002368!5.28e-09!35;UBERON:0000949!6.75e-07!45 | |ontology_enrichment_uberon=UBERON:0002107!5.93e-17!19;UBERON:0006925!5.93e-17!19;UBERON:0008836!5.93e-17!19;UBERON:0008835!1.38e-14!22;UBERON:0003894!1.38e-14!22;UBERON:0009854!6.19e-14!23;UBERON:0007499!8.72e-13!25;UBERON:0009497!8.72e-13!25;UBERON:0000015!8.72e-13!25;UBERON:0002423!8.72e-13!25;UBERON:0006235!8.72e-13!25;UBERON:0004161!8.72e-13!25;UBERON:0005057!2.81e-12!26;UBERON:0009856!2.81e-12!26;UBERON:0002365!3.17e-10!31;UBERON:0002330!3.17e-10!31;UBERON:0002368!5.28e-09!35;UBERON:0000949!6.75e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.36e-09;19!UBERON:0006925;2.36e-09;19!UBERON:0002423;2.43e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.36e-09,19;UBERON:0006925,2.36e-09,19;UBERON:0008836,2.36e-09,19;UBERON:0008835,3.27e-08,22;UBERON:0003894,3.27e-08,22;UBERON:0009854,6.75e-08,23;UBERON:0007499,2.43e-07,25;UBERON:0009497,2.43e-07,25;UBERON:0000015,2.43e-07,25;UBERON:0002423,2.43e-07,25;UBERON:0006235,2.43e-07,25;UBERON:0004161,2.43e-07,25;UBERON:0009856,4.28e-07,26 | |||
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|short_description=p5@LAT2 | |short_description=p5@LAT2 | ||
}} | }} |
Latest revision as of 11:27, 19 September 2015
Short description: | p5@LAT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LAT2_5end |
Coexpression cluster: | C242_acute_Chondrocyte_myelodysplastic_granulocyte_biphenotypic_Fibroblast_stomach |
Association with transcript: | -11bp_to_ENST00000490586_5end |
EntrezGene: | LAT2 |
HGNC: | 12749 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 1.60e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
liver | 2.36e-09 | 19 |
digestive gland | 2.36e-09 | 19 |
liver bud | 2.36e-09 | 19 |
hepatic diverticulum | 3.27e-08 | 22 |
liver primordium | 3.27e-08 | 22 |
digestive tract diverticulum | 6.75e-08 | 23 |
epithelial sac | 2.43e-07 | 25 |
epithelium of foregut-midgut junction | 2.43e-07 | 25 |
anatomical boundary | 2.43e-07 | 25 |
hepatobiliary system | 2.43e-07 | 25 |
foregut-midgut junction | 2.43e-07 | 25 |
septum transversum | 2.43e-07 | 25 |
sac | 4.28e-07 | 26 |