FFCP PHASE1:Hg19::chr7:73668692..73668763,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5982 | |EntrezGene=5982 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9970 | |HGNC=9970 | ||
|TSSclassifier=strong | |||
|UniProt=F8WC37,F8WDC9,P35250,Q75MT5 | |UniProt=F8WC37,F8WDC9,P35250,Q75MT5 | ||
|association_with_transcript=0bp_to_ENST00000352131,ENST00000463194,ENST00000473493,ENST00000480432,ENST00000493156,ENST00000494019,NM_002914,NM_181471,uc003uaj.2,uc003uak.2,uc003ual.2,uc010lbp.2,uc011kfa.1_5end | |association_with_transcript=0bp_to_ENST00000352131,ENST00000463194,ENST00000473493,ENST00000480432,ENST00000493156,ENST00000494019,NM_002914,NM_181471,uc003uaj.2,uc003uak.2,uc003ual.2,uc010lbp.2,uc011kfa.1_5end | ||
|cluster_id=chr7:73668692..73668763,- | |||
|coexpression_cluster_id=C281 | |coexpression_cluster_id=C281 | ||
|description=CAGE_peak_1_at_RFC2_5end | |description=CAGE_peak_1_at_RFC2_5end | ||
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|ontology_enrichment_celltype=CL:0000066!1.42e-14!254;CL:0000012!1.78e-10!682;CL:0000548!7.01e-10!679;CL:0000004!7.01e-10!679;CL:0000255!7.01e-10!679 | |ontology_enrichment_celltype=CL:0000066!1.42e-14!254;CL:0000012!1.78e-10!682;CL:0000548!7.01e-10!679;CL:0000004!7.01e-10!679;CL:0000255!7.01e-10!679 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.31e-15,253 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!1.48e-35!235;DOID:14566!1.49e-33!239;DOID:0050687!2.37e-21!143;DOID:305!2.10e-18!106;DOID:0050686!2.96e-17!137;DOID:2531!3.73e-16!51;DOID:0060083!3.73e-16!51;DOID:1240!2.81e-13!39;DOID:8692!8.26e-10!31 | |ontology_enrichment_disease=DOID:162!1.48e-35!235;DOID:14566!1.49e-33!239;DOID:0050687!2.37e-21!143;DOID:305!2.10e-18!106;DOID:0050686!2.96e-17!137;DOID:2531!3.73e-16!51;DOID:0060083!3.73e-16!51;DOID:1240!2.81e-13!39;DOID:8692!8.26e-10!31 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.02e-10;39!DOID:2531;2.29e-10;51!DOID:0060083;2.29e-10;51!DOID:8692;1.62e-09;31 | |ontology_enrichment_disease_v019=DOID:1240;1.02e-10;39!DOID:2531;2.29e-10;51!DOID:0060083;2.29e-10;51!DOID:8692;1.62e-09;31 | ||
|ontology_enrichment_disease_v019_2=DOID:162,1.48e-35,235;DOID:14566,1.49e-33,239;DOID:0050687,2.37e-21,143;DOID:305,2.10e-18,106;DOID:0050686,2.96e-17,137;DOID:2531,3.73e-16,51;DOID:0060083,3.73e-16,51;DOID:1240,2.81e-13,39;DOID:8692,8.26e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0001737!7.80e-07!9 | |ontology_enrichment_uberon=UBERON:0001737!7.80e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.61e-07;9!UBERON:0001557;7.61e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0001737;7.61e-07;9!UBERON:0001557;7.61e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,7.80e-07,9 | |||
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| ||
|short_description=p1@RFC2 | |short_description=p1@RFC2 | ||
}} | }} |
Latest revision as of 11:30, 19 September 2015
Short description: | p1@RFC2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RFC2_5end |
Coexpression cluster: | C281_Hodgkin_Reticulocytes_chronic_NK_acute_retinoblastoma_small |
Association with transcript: | 0bp_to_ENST00000352131, ENST00000463194, ENST00000473493, ENST00000480432, ENST00000493156, ENST00000494019, NM_002914, NM_181471, uc003uaj.2, uc003uak.2, uc003ual.2, uc010lbp.2, uc011kfa.1_5end |
EntrezGene: | RFC2 |
HGNC: | 9970 |
UniProt: | F8WC37F8WDC9P35250Q75MT5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.31e-15 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 7.80e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.48e-35 | 235 |
disease of cellular proliferation | 1.49e-33 | 239 |
cell type cancer | 2.37e-21 | 143 |
carcinoma | 2.10e-18 | 106 |
organ system cancer | 2.96e-17 | 137 |
hematologic cancer | 3.73e-16 | 51 |
immune system cancer | 3.73e-16 | 51 |
leukemia | 2.81e-13 | 39 |
myeloid leukemia | 8.26e-10 | 31 |