FFCP PHASE1:Hg19::chr22:25202192..25202227,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=129049 | |EntrezGene=129049 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29410 | |HGNC=29410 | ||
|TSSclassifier=strong | |||
|UniProt=C9J7S8 | |UniProt=C9J7S8 | ||
|association_with_transcript=4bp_to_ENST00000403206_5end | |association_with_transcript=4bp_to_ENST00000403206_5end | ||
|cluster_id=chr22:25202192..25202227,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_SGSM1_5end | |description=CAGE_peak_1_at_SGSM1_5end | ||
|id=chr22:25202192..25202227,+ | |id=chr22:25202192..25202227,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.22e-14;82!UBERON:0002532;3.76e-07;206!UBERON:0010316;3.76e-07;206 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.09e-51!115;UBERON:0001049!6.14e-34!57;UBERON:0005068!6.14e-34!57;UBERON:0006241!6.14e-34!57;UBERON:0007135!6.14e-34!57;UBERON:0001017!2.62e-28!82;UBERON:0002616!6.72e-28!59;UBERON:0005743!1.07e-27!86;UBERON:0002780!1.17e-27!41;UBERON:0001890!1.17e-27!41;UBERON:0006240!1.17e-27!41;UBERON:0003080!1.54e-26!42;UBERON:0000073!1.69e-26!94;UBERON:0001016!1.69e-26!94;UBERON:0003075!2.50e-26!86;UBERON:0007284!2.50e-26!86;UBERON:0002346!1.53e-24!90;UBERON:0000955!5.53e-24!69;UBERON:0006238!5.53e-24!69;UBERON:0002020!1.40e-22!34;UBERON:0003528!1.40e-22!34;UBERON:0001893!1.74e-22!34;UBERON:0002791!1.23e-21!33;UBERON:0001869!2.68e-21!32;UBERON:0002619!2.33e-19!22;UBERON:0001950!7.36e-18!20;UBERON:0003056!6.52e-17!61;UBERON:0000956!9.02e-16!25;UBERON:0000203!9.02e-16!25;UBERON:0004121!1.92e-12!169;UBERON:0000924!7.83e-12!173;UBERON:0006601!7.83e-12!173;UBERON:0000153!2.12e-10!129;UBERON:0007811!2.12e-10!129;UBERON:0000033!2.08e-09!123;UBERON:0000064!4.25e-09!219;UBERON:0000025!1.58e-08!194;UBERON:0003076!1.66e-08!15;UBERON:0003057!1.66e-08!15;UBERON:0002308!2.25e-08!9;UBERON:0000125!2.25e-08!9;UBERON:0002420!2.70e-08!9;UBERON:0007245!2.70e-08!9;UBERON:0010009!2.70e-08!9;UBERON:0010011!2.70e-08!9;UBERON:0000454!2.70e-08!9;UBERON:0001871!1.64e-07!7;UBERON:0004732!5.31e-07!13;UBERON:0009663!9.36e-07!7;UBERON:0004111!9.81e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.87e-34;41!UBERON:0001890;2.87e-34;41!UBERON:0001869;5.24e-33;32!UBERON:0003528;5.26e-33;34!UBERON:0002020;5.26e-33;34!UBERON:0001893;5.63e-33;34!UBERON:0002791;1.73e-32;32!UBERON:0002619;5.82e-32;22!UBERON:0000073;1.05e-31;53!UBERON:0002616;1.05e-31;53!UBERON:0001950;2.05e-29;20!UBERON:0000956;2.81e-27;25!UBERON:0000203;2.81e-27;25!UBERON:0000955;3.85e-21;68!UBERON:0001017;1.43e-20;75!UBERON:0007023;4.85e-19;114!UBERON:0001016;2.14e-18;83!UBERON:0000125;4.04e-13;9!UBERON:0002308;4.04e-13;9!UBERON:0002420;5.61e-13;9!UBERON:0007245;5.61e-13;9!UBERON:0010009;5.61e-13;9!UBERON:0010011;5.61e-13;9!UBERON:0000454;5.61e-13;9!UBERON:0004732;1.01e-10;13!UBERON:0009663;2.19e-10;7!UBERON:0001871;2.30e-10;6!UBERON:0000922;3.22e-10;49!UBERON:0001894;3.32e-10;7!UBERON:0000200;6.15e-10;6!UBERON:0004733;6.16e-10;12!UBERON:0002028;6.16e-10;12!UBERON:0002298;9.88e-10;6!UBERON:0011216;5.47e-09;132!UBERON:0002021;2.12e-08;5!UBERON:0001872;2.34e-08;5!UBERON:0000349;3.37e-08;5!UBERON:0000369;1.95e-07;4!UBERON:0002435;1.95e-07;4!UBERON:0000204;1.95e-07;4!UBERON:0003296;5.38e-07;4!UBERON:0010133;5.38e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.72e-67,114;UBERON:0001049,5.20e-60,56;UBERON:0005068,5.20e-60,56;UBERON:0006241,5.20e-60,56;UBERON:0007135,5.20e-60,56;UBERON:0000073,2.87e-56,53;UBERON:0002616,2.87e-56,53;UBERON:0001017,1.71e-51,81;UBERON:0001016,1.36e-49,89;UBERON:0002780,1.39e-47,41;UBERON:0001890,1.39e-47,41;UBERON:0003080,1.39e-47,41;UBERON:0006240,1.39e-47,41;UBERON:0000955,8.28e-46,68;UBERON:0006238,8.28e-46,68;UBERON:0003075,6.73e-44,82;UBERON:0007284,6.73e-44,82;UBERON:0002346,5.99e-41,86;UBERON:0003528,7.11e-39,34;UBERON:0002020,7.11e-39,34;UBERON:0001893,1.04e-38,34;UBERON:0001869,1.12e-36,32;UBERON:0002791,4.47e-36,32;UBERON:0010371,6.32e-33,104;UBERON:0002619,7.64e-32,22;UBERON:0003056,9.78e-31,61;UBERON:0010314,1.89e-29,132;UBERON:0001950,2.77e-29,20;UBERON:0000956,3.55e-27,25;UBERON:0000203,3.55e-27,25;UBERON:0004121,3.60e-22,171;UBERON:0000924,3.60e-22,171;UBERON:0006601,3.60e-22,171;UBERON:0011216,6.47e-22,223;UBERON:0000025,1.20e-14,192;UBERON:0003076,2.93e-13,15;UBERON:0003057,2.93e-13,15;UBERON:0000125,3.88e-13,9;UBERON:0002308,3.88e-13,9;UBERON:0002420,5.30e-13,9;UBERON:0007245,5.30e-13,9;UBERON:0010009,5.30e-13,9;UBERON:0010011,5.30e-13,9;UBERON:0000454,5.30e-13,9;UBERON:0004732,1.02e-10,13;UBERON:0009663,2.13e-10,7;UBERON:0001871,2.75e-10,6;UBERON:0001894,3.80e-10,7;UBERON:0006222,3.80e-10,7;UBERON:0000200,6.30e-10,6;UBERON:0004733,6.39e-10,12;UBERON:0002028,6.39e-10,12;UBERON:0007277,6.39e-10,12;UBERON:0002298,1.03e-09,6;UBERON:0004111,1.11e-09,240;UBERON:0002021,2.27e-08,5;UBERON:0001872,2.63e-08,5;UBERON:0000349,3.18e-08,5;UBERON:0000369,2.01e-07,4;UBERON:0002435,2.01e-07,4;UBERON:0000204,2.01e-07,4;UBERON:0010082,2.01e-07,4;UBERON:0000483,3.98e-07,306;UBERON:0000922,3.99e-07,592;UBERON:0003296,5.52e-07,4;UBERON:0010133,5.52e-07,4;UBERON:0000119,6.91e-07,309 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,1.39560233594486,0.655324116390517,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0,0,0.164201178899891,0,0,1.15148819429164,0.309632246632152,0,0,0,0,0,0.293600439334847,0,0.401088894940283,0.217010870715852,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0.329851300186716,0,0,0,0.56738522469114,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09227722252426,0,0.426730222566507,0.800791974072025,0,0.661044872784862,0,0.569212969109448,0,0,0,0.560508562981536,0,0.393419540227666,1.57204305099666,1.43921049299656,0.167186495390678,0.32592226663359,0,1.94826728407911,0.334231370655521,0.589211814949674,0,0,0.512365278902701,0,0.164437904603676,0.276350017785848,0.869409257205157,0.444859689486181,0.267540828089713,0,0.226618685395132,0.383220493601921,1.37450978193052,0.759059076058509,0,0.651083453856419,0.950452044448374,1.05402583354441,1.02389288923535,0,1.4206635122641,0,1.41124720257313,2.13952156626806,1.59306844271079,0,0,0.255725123687061,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,2.48860243445654,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0.732186172644509,0,0,0.267899184852239,0.44905874525234,0.225222960966644,0,0,0.366403487860815,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.95157929807353,1.98794652482228,1.04574548582567,2.17688215532278,2.01856680700503,1.82488679537915,0,0,1.38134921352481,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0,0.237270619111097,0.539325232640658,0,0.769494313892781,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0.737930631258681,0.171567810298526,0,1.1240175325762,0,0,0,0,0,0.231860809950154,0,0,0.462985512576611,0.761016608938393,0.790204397959275,0.858486162094873,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.829312462163088,0.720599767084807,0,0.253991577168676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,2.36436912242313,1.07813787429759,2.18183161675572,0.254094624222463,1.30139853857622,0,0.670065061337395,0,0.749007023947182,0,0,0,0,0,0.207970861530807,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.413536052245775,0.647142602455851,1.17400313583789,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.966875596732978,0,0,0,0,0,0.902399225814824,0.0770153371044148,0,0,0,0,0.170093705276516,0,0,0,0.501689773854853,0,0.831076008928724,0,0,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.564862804660675,0,0,0.443430153536676,0,0.507447609232169,0,1.13929437434833,0.238231775457789,0.411362273086194,0,0,1.58625035258854,0.106824071127473,0.962479855263359,0.980160863924127,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,1.21360521749513,0,0,0.71623345421307,0.296964680832639,1.22864280839693,5.96488588659779,8.72150381745179,0,0.824019371133798,0,8.76691148304707,0.828851746593443,4.53478946137697,0,0,0,0.0898683511473268,0,0,2.36744173528641,0,0,13.5706584453331,11.0394036812603,5.98841394003583,0,0,0,0,0,0.472775363535873,1.72371686620732,0,0,7.08593108651071,17.1246942848079,9.15490417902499,21.4523764266576,13.8907380908167,6.80094731177315,0,0.139423744278603,2.00070672109872,0,0.69169171316418,0,0,0.638002319463839,0,0.533034776018635,0,0.470940769185074,0,0,0,0,0,0,0,0.163232808159148,1.13082457147153,0.216388639742091,2.98578579323551,2.29989667708682,3.05515072466813,2.96521128680622,3.08909847366257,3.75919018219639,3.50485891499521,0,2.10838001152805,0.364909578431332,0.586993856796269,0.728341138602278,0.789168805698781,1.20990716048664,6.42752799424029,1.0741718536843,0.450970258243478,0.622129148383483,0,0,0,0,0,0,0.520679215005393,0.0979923974143777,0.261177619741208,1.92199335066233,0,0.19351266257817,0.0730893170861856,0.0821154570532092,0.581934098930517,0.617792886840502,1.12990370390266,0,0.19871461170299,9.74986257720532,0.195551382734803,0,1.70762395791482,0.599428828746391,1.00863292007874,0.916292769327325,2.57392496792947,0,0,0.235694034616795,0,0,0,0,3.00210144354895,3.42263447229983,0,0,0,5.30636562417283,3.66656678418694,2.87149209830726,3.19486400798386,4.29226048136571,2.90122894674434,1.67958681216816,0,0,0,0,0,0.196854963029498,0,4.77137813885582,7.08257711780193,1.92903778158023,2.06309154895851,1.66176135211674,0,0,10.4489237451802,0,0.472834243795189,2.30800187793992,0,0.35857467866569,0,5.71756261098694,1.32418394073086,0,0,0,0,0,0.164185041498678,0.170388021785422,0.453248366080503,0,1.32506888912221,9.17908990167009,8.85958431676023,0.342173675768659,0,1.17466153824464,0.78602152549833,1.24271716604159,0,0,0,0,0,0,0,0,0.314108192500469,7.97461361970287,7.80968095372564,9.26412887228099,4.0138643698305,6.87760119528484,9.19026763532475,0,0,0.3032982350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| ||
|short_description=p1@SGSM1 | |short_description=p1@SGSM1 | ||
}} | }} |
Latest revision as of 11:33, 19 September 2015
Short description: | p1@SGSM1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SGSM1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 4bp_to_ENST00000403206_5end |
EntrezGene: | SGSM1 |
HGNC: | 29410 |
UniProt: | C9J7S8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data