FFCP PHASE1:Hg19::chrX:131623932..131623964,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:131623932..131623964,- to FFCP PHASE1:Hg19::chrX:131623932..131623964,-: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55796 | |EntrezGene=55796 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20564 | |HGNC=20564 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=30bp_to_uc004eww.2_5end | |||
|cluster_id=chrX:131623932..131623964,- | |||
|description=CAGE_peak_7_at_MBNL3_5end | |||
|id=chrX:131623932..131623964,- | |||
|ontology_enrichment_celltype=CL:0000037!6.16e-26!172;CL:0000566!6.16e-26!172;CL:0000988!5.31e-23!182;CL:0002032!2.05e-22!165;CL:0000837!2.05e-22!165;CL:0000542!1.21e-18!53;CL:0000051!1.21e-18!53;CL:0000838!3.74e-18!52;CL:0000738!9.29e-16!140;CL:0002031!2.03e-13!124;CL:0002087!3.52e-12!119;CL:0000084!4.54e-12!25;CL:0000827!4.54e-12!25;CL:0000791!3.97e-11!18;CL:0000789!3.97e-11!18;CL:0002420!3.97e-11!18;CL:0002419!3.97e-11!18;CL:0000790!3.97e-11!18;CL:0000625!2.28e-08!11;CL:0000763!1.68e-07!112;CL:0000049!1.68e-07!112 | |||
|ontology_enrichment_celltype_v019=CL:0000084;9.98e-17;25!CL:0000791;1.64e-15;18!CL:0000789;1.64e-15;18!CL:0002419;1.64e-15;18!CL:0000542;2.12e-13;53!CL:0000625;3.11e-12;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.36e-31,168;CL:0000988,1.49e-27,177;CL:0002032,6.79e-26,161;CL:0000837,6.79e-26,161;CL:0000542,4.89e-23,53;CL:0000051,4.89e-23,53;CL:0000838,2.63e-22,52;CL:0000084,1.04e-16,25;CL:0000827,1.04e-16,25;CL:0000791,1.21e-15,18;CL:0000789,1.21e-15,18;CL:0002420,1.21e-15,18;CL:0002419,1.21e-15,18;CL:0000790,1.21e-15,18;CL:0000738,2.26e-15,136;CL:0002031,1.21e-12,120;CL:0000625,3.33e-12,11;CL:0002087,4.93e-11,115;CL:0000763,8.82e-08,108;CL:0000049,8.82e-08,108;CL:0000134,7.74e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000790;1.64e-15;18!CL:0000051;2.12e-13;53 | |||
|ontology_enrichment_disease=DOID:2531!3.27e-14!51;DOID:0060083!3.27e-14!51;DOID:1240!2.90e-13!39;DOID:8692!7.55e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.24e-17;31!DOID:1240;2.36e-16;39!DOID:2531;2.10e-13;51!DOID:0060083;2.10e-13;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.98e-22,51;DOID:0060083,4.98e-22,51;DOID:1240,7.59e-22,39;DOID:8692,1.55e-18,31 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.25e-07;15!UBERON:0000179;9.25e-07;15!UBERON:0000463;9.25e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,9.43e-07,371 | |||
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| ||
|short_description=p7@MBNL3 | |||
}} | }} |
Latest revision as of 11:37, 19 September 2015
Short description: | p7@MBNL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MBNL3_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_uc004eww.2_5end |
EntrezGene: | MBNL3 |
HGNC: | 20564 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 7.36e-31 | 168 |
hematopoietic cell | 1.49e-27 | 177 |
hematopoietic oligopotent progenitor cell | 6.79e-26 | 161 |
hematopoietic multipotent progenitor cell | 6.79e-26 | 161 |
lymphocyte | 4.89e-23 | 53 |
common lymphoid progenitor | 4.89e-23 | 53 |
lymphoid lineage restricted progenitor cell | 2.63e-22 | 52 |
T cell | 1.04e-16 | 25 |
pro-T cell | 1.04e-16 | 25 |
mature alpha-beta T cell | 1.21e-15 | 18 |
alpha-beta T cell | 1.21e-15 | 18 |
immature T cell | 1.21e-15 | 18 |
mature T cell | 1.21e-15 | 18 |
immature alpha-beta T cell | 1.21e-15 | 18 |
leukocyte | 2.26e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 1.21e-12 | 120 |
CD8-positive, alpha-beta T cell | 3.33e-12 | 11 |
nongranular leukocyte | 4.93e-11 | 115 |
myeloid cell | 8.82e-08 | 108 |
common myeloid progenitor | 8.82e-08 | 108 |
mesenchymal cell | 7.74e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 9.43e-07 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.98e-22 | 51 |
immune system cancer | 4.98e-22 | 51 |
leukemia | 7.59e-22 | 39 |
myeloid leukemia | 1.55e-18 | 31 |