FFCP PHASE1:Hg19::chr8:93031384..93031395,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=862 | |EntrezGene=862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1535 | |HGNC=1535 | ||
|TSSclassifier=strong | |||
|UniProt=E5RG85 | |UniProt=E5RG85 | ||
|association_with_transcript=7bp_to_ENST00000521054_5end | |association_with_transcript=7bp_to_ENST00000521054_5end | ||
|cluster_id=chr8:93031384..93031395,- | |||
|description=CAGE_peak_34_at_RUNX1T1_5end | |description=CAGE_peak_34_at_RUNX1T1_5end | ||
|id=chr8:93031384..93031395,- | |id=chr8:93031384..93031395,- | ||
|ontology_enrichment_celltype=CL:0000057!5.57e-19!75;CL:0002620!4.14e-17!23;CL:0000055!1.13e-13!180;CL:0000048!6.39e-07!430 | |ontology_enrichment_celltype=CL:0000057!5.57e-19!75;CL:0002620!4.14e-17!23;CL:0000055!1.13e-13!180;CL:0000048!6.39e-07!430 | ||
|ontology_enrichment_celltype_v019=CL:1000306;1.38e-09;4!CL:0002547;1.38e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,1.32e-09,4;CL:0002547,1.32e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0004140;4.27e-34;1!UBERON:0005062;8.35e-34;4!UBERON:0007284;8.35e-34;4 | |||
|ontology_enrichment_disease=DOID:17!9.37e-08!5;DOID:450!9.37e-08!5;DOID:66!9.37e-08!5;DOID:423!9.37e-08!5;DOID:0080000!9.37e-08!5;DOID:11722!9.37e-08!5 | |ontology_enrichment_disease=DOID:17!9.37e-08!5;DOID:450!9.37e-08!5;DOID:66!9.37e-08!5;DOID:423!9.37e-08!5;DOID:0080000!9.37e-08!5;DOID:11722!9.37e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:114;8.34e-18;2!DOID:1287;1.38e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.48e-18,2;DOID:1287,1.12e-09,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0003978;1.22e-44;3!UBERON:0000946;1.22e-44;3!UBERON:0002135;4.27e-34;1!UBERON:0002146;4.27e-34;1!UBERON:0005623;4.27e-34;1!UBERON:0007100;1.21e-21;25!UBERON:0002133;8.34e-18;2!UBERON:0000948;2.92e-14;22!UBERON:0010313;3.25e-14;10!UBERON:0004797;1.38e-09;4!UBERON:0000415;1.38e-09;4!UBERON:0007240;1.38e-09;4!UBERON:0005742;1.38e-09;4!UBERON:0005734;1.38e-09;4!UBERON:0004664;1.38e-09;4!UBERON:0004663;1.38e-09;4!UBERON:0003103;5.94e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.91e-44,3;UBERON:0009751,1.91e-44,3;UBERON:0000946,1.91e-44,3;UBERON:0002523,1.91e-44,3;UBERON:0005983,1.91e-44,3;UBERON:0002165,1.91e-44,3;UBERON:0002062,1.91e-44,3;UBERON:0007280,1.91e-44,3;UBERON:0004797,9.27e-43,7;UBERON:0002135,5.05e-34,1;UBERON:0002146,7.06e-34,1;UBERON:0005623,7.06e-34,1;UBERON:0007100,3.90e-20,27;UBERON:0002133,9.07e-18,2;UBERON:0010313,3.71e-14,10;UBERON:0002342,3.71e-14,10;UBERON:0005062,3.71e-14,10;UBERON:0000948,3.94e-13,24;UBERON:0005498,3.94e-13,24;UBERON:0004140,3.94e-13,24;UBERON:0009881,3.94e-13,24;UBERON:0004141,3.94e-13,24;UBERON:0003084,3.94e-13,24;UBERON:0007005,3.94e-13,24;UBERON:0004139,3.94e-13,24;UBERON:0004291,3.94e-13,24;UBERON:0000415,1.32e-09,4;UBERON:0007240,1.32e-09,4;UBERON:0005742,1.32e-09,4;UBERON:0005734,1.32e-09,4;UBERON:0004664,1.32e-09,4;UBERON:0004663,1.32e-09,4;UBERON:0003103,2.38e-08,68;UBERON:0001009,7.95e-08,112;UBERON:0004872,6.53e-07,83 | |||
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| ||
|short_description=p34@RUNX1T1 | |short_description=p34@RUNX1T1 | ||
}} | }} |
Latest revision as of 11:41, 19 September 2015
Short description: | p34@RUNX1T1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_34_at_RUNX1T1_5end |
Coexpression cluster: | NA |
Association with transcript: | 7bp_to_ENST00000521054_5end |
EntrezGene: | RUNX1T1 |
HGNC: | 1535 |
UniProt: | E5RG85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 1.32e-09 | 4 |
fibroblast of the aortic adventitia | 1.32e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
valve | 1.91e-44 | 3 |
cardiac mesenchyme | 1.91e-44 | 3 |
cardial valve | 1.91e-44 | 3 |
tunica intima | 1.91e-44 | 3 |
heart layer | 1.91e-44 | 3 |
endocardium | 1.91e-44 | 3 |
endocardial cushion | 1.91e-44 | 3 |
presumptive endocardium | 1.91e-44 | 3 |
blood vessel layer | 9.27e-43 | 7 |
mitral valve | 5.05e-34 | 1 |
pulmonary valve | 7.06e-34 | 1 |
semi-lunar valve | 7.06e-34 | 1 |
primary circulatory organ | 3.90e-20 | 27 |
atrioventricular valve | 9.07e-18 | 2 |
neural crest-derived structure | 3.71e-14 | 10 |
neural crest | 3.71e-14 | 10 |
neural fold | 3.71e-14 | 10 |
heart | 3.94e-13 | 24 |
primitive heart tube | 3.94e-13 | 24 |
primary heart field | 3.94e-13 | 24 |
anterior lateral plate mesoderm | 3.94e-13 | 24 |
heart tube | 3.94e-13 | 24 |
heart primordium | 3.94e-13 | 24 |
cardiac mesoderm | 3.94e-13 | 24 |
cardiogenic plate | 3.94e-13 | 24 |
heart rudiment | 3.94e-13 | 24 |
artery wall | 1.32e-09 | 4 |
tunica adventitia of artery | 1.32e-09 | 4 |
adventitia | 1.32e-09 | 4 |
tunica adventitia of blood vessel | 1.32e-09 | 4 |
aorta tunica adventitia | 1.32e-09 | 4 |
aorta wall | 1.32e-09 | 4 |
compound organ | 2.38e-08 | 68 |
circulatory system | 7.95e-08 | 112 |
splanchnic layer of lateral plate mesoderm | 6.53e-07 | 83 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.48e-18 | 2 |
cardiovascular system disease | 1.12e-09 | 4 |