FFCP PHASE1:Hg19::chr17:30185899..30185906,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55352 | |EntrezGene=55352 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28848 | |HGNC=28848 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=186bp_to_ENST00000378634_5end | |association_with_transcript=186bp_to_ENST00000378634_5end | ||
|cluster_id=chr17:30185899..30185906,- | |||
|coexpression_cluster_id=C3623 | |||
|description=CAGE_peak_9_at_C17orf79_5end | |description=CAGE_peak_9_at_C17orf79_5end | ||
|id=chr17:30185899..30185906,- | |id=chr17:30185899..30185906,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002592;1.40e-14;3!CL:0002567;1.96e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002592,1.40e-14,3;CL:0002567,2.09e-14,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.39e-17;10!UBERON:0005564;6.39e-17;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000200!5.83e-12!6;UBERON:0007023!1.90e-09!115;UBERON:0001950!3.76e-09!20;UBERON:0001869!5.36e-09!32;UBERON:0001893!2.12e-08!34;UBERON:0002020!2.15e-08!34;UBERON:0003528!2.15e-08!34;UBERON:0002619!2.80e-08!22;UBERON:0001049!3.35e-08!57;UBERON:0005068!3.35e-08!57;UBERON:0006241!3.35e-08!57;UBERON:0007135!3.35e-08!57;UBERON:0002616!7.49e-08!59;UBERON:0000955!1.48e-07!69;UBERON:0006238!1.48e-07!69;UBERON:0000956!3.19e-07!25;UBERON:0000203!3.19e-07!25;UBERON:0001017!4.07e-07!82;UBERON:0002771!5.82e-07!3;UBERON:0002791!7.51e-07!33;UBERON:0000073!8.85e-07!94;UBERON:0001016!8.85e-07!94;UBERON:0002780!9.30e-07!41;UBERON:0001890!9.30e-07!41;UBERON:0006240!9.30e-07!41 | |ontology_enrichment_uberon=UBERON:0000200!5.83e-12!6;UBERON:0007023!1.90e-09!115;UBERON:0001950!3.76e-09!20;UBERON:0001869!5.36e-09!32;UBERON:0001893!2.12e-08!34;UBERON:0002020!2.15e-08!34;UBERON:0003528!2.15e-08!34;UBERON:0002619!2.80e-08!22;UBERON:0001049!3.35e-08!57;UBERON:0005068!3.35e-08!57;UBERON:0006241!3.35e-08!57;UBERON:0007135!3.35e-08!57;UBERON:0002616!7.49e-08!59;UBERON:0000955!1.48e-07!69;UBERON:0006238!1.48e-07!69;UBERON:0000956!3.19e-07!25;UBERON:0000203!3.19e-07!25;UBERON:0001017!4.07e-07!82;UBERON:0002771!5.82e-07!3;UBERON:0002791!7.51e-07!33;UBERON:0000073!8.85e-07!94;UBERON:0001016!8.85e-07!94;UBERON:0002780!9.30e-07!41;UBERON:0001890!9.30e-07!41;UBERON:0006240!9.30e-07!41 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;7.35e-21;8!UBERON:0003135;1.74e-15;11!UBERON:0003498;1.40e-14;3!UBERON:0005985;1.40e-14;3!UBERON:0001621;1.40e-14;3!UBERON:0000991;1.32e-08;21!UBERON:0003101;2.93e-08;22!UBERON:0000079;2.93e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.35e-21,8;UBERON:0003135,1.74e-15,11;UBERON:0001621,1.40e-14,3;UBERON:0003498,2.74e-09,5;UBERON:0005985,2.74e-09,5;UBERON:0000991,1.32e-08,21;UBERON:0009196,1.32e-08,21;UBERON:0009117,1.32e-08,21;UBERON:0005564,1.32e-08,21;UBERON:0004176,2.93e-08,22;UBERON:0003101,2.93e-08,22;UBERON:0000079,2.93e-08,22 | |||
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| ||
|short_description=p9@C17orf79 | |short_description=p9@C17orf79 | ||
}} | }} |
Latest revision as of 11:47, 19 September 2015
Short description: | p9@C17orf79 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_C17orf79_5end |
Coexpression cluster: | C3623_testis_Smooth_Fibroblast_bone_Melanocyte_Myoblast_Multipotent |
Association with transcript: | 186bp_to_ENST00000378634_5end |
EntrezGene: | C17orf79 |
HGNC: | 28848 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the coronary artery | 1.40e-14 | 3 |
light melanocyte | 2.09e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 7.35e-21 | 8 |
male reproductive organ | 1.74e-15 | 11 |
coronary artery | 1.40e-14 | 3 |
heart blood vessel | 2.74e-09 | 5 |
coronary vessel | 2.74e-09 | 5 |
gonad | 1.32e-08 | 21 |
indifferent external genitalia | 1.32e-08 | 21 |
indifferent gonad | 1.32e-08 | 21 |
gonad primordium | 1.32e-08 | 21 |
external genitalia | 2.93e-08 | 22 |
male organism | 2.93e-08 | 22 |
male reproductive system | 2.93e-08 | 22 |