FFCP PHASE1:Hg19::chr1:8484953..8484970,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=473 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9965 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=301bp_to_ENST00000488215_5end | |||
|cluster_id=chr1:8484953..8484970,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_43_at_RERE_5end | |||
|id=chr1:8484953..8484970,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;1.30e-19;1!UBERON:0004140;1.71e-19;1!UBERON:0005062;8.11e-19;4!UBERON:0007284;8.11e-19;4 | |||
|ontology_enrichment_disease=DOID:114!1.79e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;2.07e-37;2!DOID:178;1.71e-19;1!DOID:326;1.71e-19;1!DOID:3978;1.71e-19;1!DOID:3394;1.71e-19;1!DOID:5844;1.71e-19;1!DOID:1287;2.84e-19;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.89e-37,2;DOID:178,1.56e-19,1;DOID:326,1.56e-19,1;DOID:3978,1.56e-19,1;DOID:3394,1.56e-19,1;DOID:5844,1.56e-19,1;DOID:1287,2.71e-19,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.13e-44!115;UBERON:0001049!1.09e-18!57;UBERON:0005068!1.09e-18!57;UBERON:0006241!1.09e-18!57;UBERON:0007135!1.09e-18!57;UBERON:0002616!7.99e-18!59;UBERON:0001017!1.25e-17!82;UBERON:0005743!1.70e-16!86;UBERON:0001893!4.21e-16!34;UBERON:0002346!4.88e-16!90;UBERON:0003075!1.07e-15!86;UBERON:0007284!1.07e-15!86;UBERON:0000955!1.29e-15!69;UBERON:0006238!1.29e-15!69;UBERON:0002791!1.25e-14!33;UBERON:0000073!2.67e-14!94;UBERON:0001016!2.67e-14!94;UBERON:0002020!4.00e-14!34;UBERON:0003528!4.00e-14!34;UBERON:0001869!3.39e-13!32;UBERON:0002780!9.33e-13!41;UBERON:0001890!9.33e-13!41;UBERON:0006240!9.33e-13!41;UBERON:0003080!2.28e-12!42;UBERON:0000200!1.21e-11!6;UBERON:0001950!1.55e-11!20;UBERON:0002298!3.64e-11!8;UBERON:0002619!2.39e-10!22;UBERON:0004111!2.47e-10!241;UBERON:0002771!1.38e-09!3;UBERON:0007100!3.14e-09!27;UBERON:0000025!3.58e-09!194;UBERON:0000924!3.92e-09!173;UBERON:0006601!3.92e-09!173;UBERON:0000153!5.40e-09!129;UBERON:0007811!5.40e-09!129;UBERON:0000477!5.78e-09!286;UBERON:0000956!6.47e-09!25;UBERON:0000203!6.47e-09!25;UBERON:0000033!7.53e-09!123;UBERON:0004121!9.14e-09!169;UBERON:0001896!1.03e-08!3;UBERON:0005290!1.03e-08!3;UBERON:0010096!1.03e-08!3;UBERON:0003076!7.74e-08!15;UBERON:0003057!7.74e-08!15;UBERON:0004733!1.79e-07!12;UBERON:0002028!1.79e-07!12;UBERON:0007277!1.79e-07!12;UBERON:0003056!1.93e-07!61;UBERON:0002308!3.92e-07!9;UBERON:0000125!3.92e-07!9;UBERON:0004732!7.57e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;1.16e-45;25!UBERON:0003978;1.01e-24;3!UBERON:0000946;1.01e-24;3!UBERON:0000948;1.60e-20;22!UBERON:0002084;1.30e-19;1!UBERON:0002082;1.30e-19;1!UBERON:0002135;3.56e-19;1!UBERON:0002146;3.56e-19;1!UBERON:0005623;3.56e-19;1!UBERON:0002702;2.85e-10;2!UBERON:0002133;2.85e-10;2!UBERON:0001950;2.74e-08;20!UBERON:0010313;4.18e-08;10!UBERON:0003103;7.24e-08;61!UBERON:0002619;1.29e-07;22!UBERON:0004151;2.05e-07;3!UBERON:0001870;2.88e-07;3!UBERON:0000956;8.45e-07;25!UBERON:0000203;8.45e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,3.14e-42,27;UBERON:0003978,1.01e-24,3;UBERON:0009751,1.01e-24,3;UBERON:0000946,1.01e-24,3;UBERON:0002523,1.01e-24,3;UBERON:0005983,1.01e-24,3;UBERON:0002165,1.01e-24,3;UBERON:0002062,1.01e-24,3;UBERON:0007280,1.01e-24,3;UBERON:0002084,1.30e-19,1;UBERON:0002082,1.30e-19,1;UBERON:0010226,1.30e-19,1;UBERON:0002135,3.25e-19,1;UBERON:0002146,3.91e-19,1;UBERON:0005623,3.91e-19,1;UBERON:0000948,8.50e-19,24;UBERON:0005498,8.50e-19,24;UBERON:0004140,8.50e-19,24;UBERON:0009881,8.50e-19,24;UBERON:0004141,8.50e-19,24;UBERON:0003084,8.50e-19,24;UBERON:0007005,8.50e-19,24;UBERON:0004139,8.50e-19,24;UBERON:0004291,8.50e-19,24;UBERON:0003103,1.41e-16,68;UBERON:0004797,3.48e-11,7;UBERON:0002133,2.72e-10,2;UBERON:0002702,3.58e-10,2;UBERON:0001009,7.02e-10,112;UBERON:0007023,1.04e-09,114;UBERON:0001950,2.64e-08,20;UBERON:0010314,3.73e-08,132;UBERON:0010313,4.19e-08,10;UBERON:0002342,4.19e-08,10;UBERON:0005062,4.19e-08,10;UBERON:0002619,1.24e-07,22;UBERON:0004151,2.05e-07,3;UBERON:0001870,3.35e-07,3;UBERON:0000956,8.20e-07,25;UBERON:0000203,8.20e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24484414159907,0,0.163461903113459,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.884634079449797,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39641200636127,1.3749625440701,0,2.79550600698588,6.43839072204856,5.80245789348869,2.35142153703542,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0.182248669974074,0,0,0,0,0,0,0,3.31045985182716,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.640724475406168,0.943225830597996,0,0,0,0,0,0,0.2506898940227,0.612691153526923,0,0.157054096250234,0,0.366078794705889,1.1267183763585,0.573409195690071,0.221858103073705,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,1.59633859057151,0,0,0.138314504928436,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0.135075169236789,0,1.44680757550829,0.380494861163441,0,0,0,0.175871244359621,0,0,0,0,0,0,0,0,0.0679697329768317,0.197318320688547,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821302454849976,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.909344378618873,0.803892390468535,0,0,0.213233981900981,0,0,0,0,0.636471582781649,0,0.653150243690884,0.684466602170562,0,0,0.332660356546013,0,0,0,0,0,0.244482888365733,0,0.665756774185513,0.201273793591026,0 | |||
|short_description=p43@RERE | |||
}} |
Latest revision as of 11:58, 19 September 2015
Short description: | p43@RERE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_43_at_RERE_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 301bp_to_ENST00000488215_5end |
EntrezGene: | RERE |
HGNC: | 9965 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 1.89e-37 | 2 |
vascular disease | 1.56e-19 | 1 |
ischemia | 1.56e-19 | 1 |
extrinsic cardiomyopathy | 1.56e-19 | 1 |
myocardial ischemia | 1.56e-19 | 1 |
myocardial infarction | 1.56e-19 | 1 |
cardiovascular system disease | 2.71e-19 | 4 |