FFCP PHASE1:Hg19::chr17:30814163..30814176,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:30814163..30814176,+ to FFCP PHASE1:Hg19::chr17:30814163..30814176,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8851 | |EntrezGene=8851 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=1775 | |HGNC=1775 | ||
|TSSclassifier=strong | |||
|UniProt=Q15078,Q8N619 | |UniProt=Q15078,Q8N619 | ||
|association_with_transcript=58bp_to_NM_003885,uc002hhn.2_5end | |||
|cluster_id=chr17:30814163..30814176,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_9_at_CDK5R1_5end | |||
|id=chr17:30814163..30814176,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.89e-16;82!UBERON:0010122;2.96e-10;2!UBERON:0006215;7.76e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.60e-53!57;UBERON:0005068!2.60e-53!57;UBERON:0006241!2.60e-53!57;UBERON:0007135!2.60e-53!57;UBERON:0002780!4.80e-46!41;UBERON:0001890!4.80e-46!41;UBERON:0006240!4.80e-46!41;UBERON:0002616!5.14e-46!59;UBERON:0001017!2.10e-45!82;UBERON:0003080!1.11e-44!42;UBERON:0005743!2.78e-44!86;UBERON:0000955!6.05e-43!69;UBERON:0006238!6.05e-43!69;UBERON:0001869!6.41e-42!32;UBERON:0001893!1.01e-41!34;UBERON:0002020!1.04e-41!34;UBERON:0003528!1.04e-41!34;UBERON:0000073!4.72e-40!94;UBERON:0001016!4.72e-40!94;UBERON:0002791!4.92e-40!33;UBERON:0002346!1.06e-37!90;UBERON:0003075!8.36e-37!86;UBERON:0007284!8.36e-37!86;UBERON:0002619!4.58e-36!22;UBERON:0000956!1.35e-33!25;UBERON:0000203!1.35e-33!25;UBERON:0001950!7.69e-33!20;UBERON:0003056!1.95e-30!61;UBERON:0007023!1.14e-28!115;UBERON:0000153!1.80e-23!129;UBERON:0007811!1.80e-23!129;UBERON:0000033!4.52e-23!123;UBERON:0000924!2.94e-22!173;UBERON:0006601!2.94e-22!173;UBERON:0004121!2.72e-21!169;UBERON:0000200!1.11e-11!6;UBERON:0001871!2.96e-11!7;UBERON:0001872!3.77e-10!5;UBERON:0003076!5.14e-10!15;UBERON:0003057!5.14e-10!15;UBERON:0000025!6.94e-10!194;UBERON:0002420!9.43e-10!9;UBERON:0007245!9.43e-10!9;UBERON:0010009!9.43e-10!9;UBERON:0010011!9.43e-10!9;UBERON:0000454!9.43e-10!9;UBERON:0002021!9.64e-10!5;UBERON:0000349!1.15e-09!5;UBERON:0002308!1.36e-09!9;UBERON:0000125!1.36e-09!9;UBERON:0000064!1.69e-09!219;UBERON:0004733!2.26e-08!12;UBERON:0002028!2.26e-08!12;UBERON:0007277!2.26e-08!12;UBERON:0000369!4.11e-08!4;UBERON:0002435!4.11e-08!4;UBERON:0000204!4.11e-08!4;UBERON:0010082!4.11e-08!4;UBERON:0004732!1.35e-07!13;UBERON:0000483!3.34e-07!309;UBERON:0004111!3.78e-07!241;UBERON:0000119!5.51e-07!312;UBERON:0009663!8.29e-07!7;UBERON:0002680!9.83e-07!9;UBERON:0001895!9.83e-07!9;UBERON:0010092!9.83e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.02e-95;22!UBERON:0001869;1.25e-95;32!UBERON:0002791;3.09e-89;32!UBERON:0003528;1.01e-87;34!UBERON:0002020;1.01e-87;34!UBERON:0001950;5.70e-87;20!UBERON:0001893;1.30e-86;34!UBERON:0000956;4.44e-84;25!UBERON:0000203;4.44e-84;25!UBERON:0002780;1.12e-71;41!UBERON:0001890;1.12e-71;41!UBERON:0000073;4.12e-54;53!UBERON:0002616;4.12e-54;53!UBERON:0000955;6.64e-41;68!UBERON:0001017;1.28e-36;75!UBERON:0000200;6.78e-29;6!UBERON:0001016;2.92e-26;83!UBERON:0002420;1.19e-24;9!UBERON:0007245;1.19e-24;9!UBERON:0010009;1.19e-24;9!UBERON:0010011;1.19e-24;9!UBERON:0000454;1.19e-24;9!UBERON:0001872;1.26e-24;5!UBERON:0001871;4.44e-24;6!UBERON:0002021;1.44e-23;5!UBERON:0000349;4.76e-23;5!UBERON:0000369;5.22e-19;4!UBERON:0002435;5.22e-19;4!UBERON:0000204;5.22e-19;4!UBERON:0000125;2.91e-18;9!UBERON:0002308;2.91e-18;9!UBERON:0009663;8.14e-17;7!UBERON:0007023;3.64e-15;114!UBERON:0001870;4.02e-15;3!UBERON:0005383;1.51e-14;3!UBERON:0005382;1.51e-14;3!UBERON:0011216;2.93e-11;132!UBERON:0002771;8.77e-11;2!UBERON:0002702;1.72e-10;2!UBERON:0001873;2.96e-10;2!UBERON:0001954;2.96e-10;2!UBERON:0003022;2.96e-10;2!UBERON:0002421;2.96e-10;2!UBERON:0002600;2.96e-10;2!UBERON:0001876;4.52e-10;2!UBERON:0001905;4.52e-10;2!UBERON:0002757;4.52e-10;2!UBERON:0010134;4.52e-10;2!UBERON:0005408;4.52e-10;2!UBERON:0001899;4.52e-10;2!UBERON:0004733;3.76e-09;12!UBERON:0002028;3.76e-09;12!UBERON:0010314;1.61e-08;132!UBERON:0004732;1.98e-08;13!UBERON:0002680;3.68e-08;9!UBERON:0001895;3.68e-08;9!UBERON:0002298;2.63e-07;6!UBERON:0000988;5.46e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.50e-107,32;UBERON:0000073,6.26e-106,53;UBERON:0002616,6.26e-106,53;UBERON:0002780,2.88e-102,41;UBERON:0001890,2.88e-102,41;UBERON:0003080,2.88e-102,41;UBERON:0006240,2.88e-102,41;UBERON:0001893,4.81e-101,34;UBERON:0003528,1.12e-100,34;UBERON:0002020,1.12e-100,34;UBERON:0001049,5.68e-100,56;UBERON:0005068,5.68e-100,56;UBERON:0006241,5.68e-100,56;UBERON:0007135,5.68e-100,56;UBERON:0002791,1.23e-99,32;UBERON:0002619,8.72e-96,22;UBERON:0000955,4.16e-90,68;UBERON:0006238,4.16e-90,68;UBERON:0001950,5.24e-87,20;UBERON:0000956,3.89e-84,25;UBERON:0000203,3.89e-84,25;UBERON:0001017,2.16e-83,81;UBERON:0001016,1.72e-74,89;UBERON:0003056,4.35e-67,61;UBERON:0003075,2.32e-66,82;UBERON:0007284,2.32e-66,82;UBERON:0002346,5.69e-63,86;UBERON:0010371,6.58e-51,104;UBERON:0007023,1.47e-46,114;UBERON:0010314,3.36e-41,132;UBERON:0004121,9.19e-36,171;UBERON:0000924,9.19e-36,171;UBERON:0006601,9.19e-36,171;UBERON:0011216,4.74e-29,223;UBERON:0000200,9.73e-29,6;UBERON:0002420,6.82e-25,9;UBERON:0007245,6.82e-25,9;UBERON:0010009,6.82e-25,9;UBERON:0010011,6.82e-25,9;UBERON:0000454,6.82e-25,9;UBERON:0001872,1.30e-24,5;UBERON:0000025,2.77e-24,192;UBERON:0001871,3.63e-24,6;UBERON:0002021,1.62e-23,5;UBERON:0000349,2.60e-23,5;UBERON:0000369,3.85e-19,4;UBERON:0002435,3.85e-19,4;UBERON:0000204,3.85e-19,4;UBERON:0010082,3.85e-19,4;UBERON:0000125,2.32e-18,9;UBERON:0002308,2.32e-18,9;UBERON:0004111,6.09e-18,240;UBERON:0009663,6.90e-17,7;UBERON:0001870,4.32e-15,3;UBERON:0005383,1.17e-14,3;UBERON:0005382,1.17e-14,3;UBERON:0000483,1.88e-12,306;UBERON:0000119,2.94e-12,309;UBERON:0002771,1.12e-10,2;UBERON:0002702,1.80e-10,2;UBERON:0001873,2.51e-10,2;UBERON:0010122,2.51e-10,2;UBERON:0001876,2.76e-10,2;UBERON:0001954,2.76e-10,2;UBERON:0003022,2.76e-10,2;UBERON:0002421,2.76e-10,2;UBERON:0002600,2.76e-10,2;UBERON:0001905,3.66e-10,2;UBERON:0002757,3.66e-10,2;UBERON:0010134,3.66e-10,2;UBERON:0005408,3.66e-10,2;UBERON:0001899,3.66e-10,2;UBERON:0004733,4.12e-09,12;UBERON:0002028,4.12e-09,12;UBERON:0007277,4.12e-09,12;UBERON:0004732,2.15e-08,13;UBERON:0002680,3.64e-08,9;UBERON:0001895,3.64e-08,9;UBERON:0010092,3.64e-08,9;UBERON:0002298,2.81e-07,6;UBERON:0003076,3.05e-07,15;UBERON:0003057,3.05e-07,15;UBERON:0000988,5.06e-07,3;UBERON:0000923,9.01e-07,560;UBERON:0010316,9.01e-07,560;UBERON:0005291,9.01e-07,560;UBERON:0006598,9.01e-07,560;UBERON:0010317,9.01e-07,560;UBERON:0002532,9.01e-07,560 | |||
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|short_description=p9@CDK5R1 | |||
}} | }} |
Latest revision as of 12:32, 19 September 2015
Short description: | p9@CDK5R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CDK5R1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 58bp_to_NM_003885, uc002hhn.2_5end |
EntrezGene: | CDK5R1 |
HGNC: | 1775 |
UniProt: | Q15078Q8N619 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data