FFCP PHASE1:Hg19::chr11:65770524..65770535,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8815 | |EntrezGene=8815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17397 | |HGNC=17397 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-171bp_to_ENST00000528648_5end | |association_with_transcript=-171bp_to_ENST00000528648_5end | ||
|cluster_id=chr11:65770524..65770535,+ | |||
|description=CAGE_peak_13_at_BANF1_5end | |description=CAGE_peak_13_at_BANF1_5end | ||
|id=chr11:65770524..65770535,+ | |id=chr11:65770524..65770535,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002327;1.82e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,1.96e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0008801;9.98e-30;1!UBERON:0008425;9.98e-30;1!UBERON:0006298;2.73e-29;1!UBERON:0005754;2.73e-29;1!UBERON:0007297;2.21e-15;2 | |||
|ontology_enrichment_disease=DOID:7!7.35e-07!39 | |ontology_enrichment_disease=DOID:7!7.35e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:5093;1.82e-08;4!DOID:1612;1.82e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.96e-08,4;DOID:1612,1.96e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001829!1.07e-08!2;UBERON:0000341!1.59e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;4.13e-57;2!UBERON:0001831;9.98e-30;1!UBERON:0001567;9.98e-30;1!UBERON:0000998;2.73e-29;1!UBERON:0001736;2.73e-29;1!UBERON:0006868;2.73e-29;1!UBERON:0001044;7.48e-20;6!UBERON:0003293;7.48e-20;6!UBERON:0003294;7.48e-20;6!UBERON:0010047;7.48e-20;6!UBERON:0003408;7.48e-20;6!UBERON:0000167;7.48e-20;6!UBERON:0004089;1.33e-15;2!UBERON:0000341;2.21e-15;2!UBERON:0001723;1.04e-10;3!UBERON:0006947;1.04e-10;3!UBERON:0001033;1.04e-10;3!UBERON:0004054;1.04e-10;3!UBERON:0000165;8.29e-10;28!UBERON:0002365;3.05e-09;31!UBERON:0002330;3.05e-09;31!UBERON:0001041;4.29e-09;14!UBERON:0001911;1.82e-08;4!UBERON:0005904;2.35e-08;4!UBERON:0000161;6.10e-07;19!UBERON:0000166;6.10e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.69e-57,2;UBERON:0001831,7.48e-30,1;UBERON:0001567,7.48e-30,1;UBERON:0008801,7.48e-30,1;UBERON:0001736,2.37e-29,1;UBERON:0006298,2.37e-29,1;UBERON:0000998,3.16e-29,1;UBERON:0006868,3.16e-29,1;UBERON:0001044,6.48e-20,6;UBERON:0003293,6.48e-20,6;UBERON:0003294,6.48e-20,6;UBERON:0010047,6.48e-20,6;UBERON:0000167,6.48e-20,6;UBERON:0004089,1.15e-15,2;UBERON:0000341,1.78e-15,2;UBERON:0003408,2.24e-12,10;UBERON:0000166,2.74e-12,22;UBERON:0006947,1.09e-10,3;UBERON:0004054,1.09e-10,3;UBERON:0001723,1.20e-10,3;UBERON:0001033,1.20e-10,3;UBERON:0010056,1.20e-10,3;UBERON:0000165,1.71e-09,29;UBERON:0000930,1.71e-09,29;UBERON:0002365,5.69e-09,31;UBERON:0002330,5.69e-09,31;UBERON:0001911,1.96e-08,4;UBERON:0005333,1.96e-08,4;UBERON:0008425,1.96e-08,4;UBERON:0005311,1.96e-08,4;UBERON:0005904,2.43e-08,4;UBERON:0002530,3.56e-08,59;UBERON:0000153,8.76e-08,62;UBERON:0007811,8.76e-08,62;UBERON:0000161,8.95e-08,36 | |||
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| ||
|short_description=p13@BANF1 | |short_description=p13@BANF1 | ||
}} | }} |
Latest revision as of 12:45, 19 September 2015
Short description: | p13@BANF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_BANF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -171bp_to_ENST00000528648_5end |
EntrezGene: | BANF1 |
HGNC: | 17397 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 2.69e-57 | 2 |
parotid gland | 7.48e-30 | 1 |
cheek | 7.48e-30 | 1 |
parotid gland primordium | 7.48e-30 | 1 |
submandibular gland | 2.37e-29 | 1 |
submandibular gland primordium | 2.37e-29 | 1 |
seminal vesicle | 3.16e-29 | 1 |
seminal fluid secreting gland | 3.16e-29 | 1 |
saliva-secreting gland | 6.48e-20 | 6 |
gland of oral region | 6.48e-20 | 6 |
gland of foregut | 6.48e-20 | 6 |
oral gland | 6.48e-20 | 6 |
oral cavity | 6.48e-20 | 6 |
midface | 1.15e-15 | 2 |
throat | 1.78e-15 | 2 |
gland of gut | 2.24e-12 | 10 |
oral opening | 2.74e-12 | 22 |
male genital duct | 1.09e-10 | 3 |
internal male genitalia | 1.09e-10 | 3 |
tongue | 1.20e-10 | 3 |
gustatory system | 1.20e-10 | 3 |
future tongue | 1.20e-10 | 3 |
mouth | 1.71e-09 | 29 |
stomodeum | 1.71e-09 | 29 |
exocrine gland | 5.69e-09 | 31 |
exocrine system | 5.69e-09 | 31 |
mammary gland | 1.96e-08 | 4 |
mammary bud | 1.96e-08 | 4 |
mammary ridge | 1.96e-08 | 4 |
mammary placode | 1.96e-08 | 4 |
duct of male reproductive system | 2.43e-08 | 4 |
gland | 3.56e-08 | 59 |
anterior region of body | 8.76e-08 | 62 |
craniocervical region | 8.76e-08 | 62 |
orifice | 8.95e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.96e-08 | 4 |
breast cancer | 1.96e-08 | 4 |