FFCP PHASE1:Hg19::chr11:65779378..65779390,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1474 | |EntrezGene=1474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2478 | |HGNC=2478 | ||
|TSSclassifier=strong | |||
|UniProt=Q15828 | |UniProt=Q15828 | ||
|association_with_transcript=66bp_to_ENST00000312134_5end | |association_with_transcript=66bp_to_ENST00000312134_5end | ||
|cluster_id=chr11:65779378..65779390,+ | |||
|coexpression_cluster_id=C1349 | |||
|description=CAGE_peak_8_at_CST6_5end | |description=CAGE_peak_8_at_CST6_5end | ||
|id=chr11:65779378..65779390,+ | |id=chr11:65779378..65779390,+ | ||
|ontology_enrichment_celltype=CL:1000507!1.10e-11!12;CL:1000494!1.10e-11!12;CL:1000449!3.36e-11!16;CL:0002541!6.63e-11!3;CL:0000066!2.37e-10!254;CL:1000497!8.47e-10!18;CL:0002518!8.47e-10!18;CL:0002681!4.36e-08!13;CL:0002584!4.36e-08!13;CL:1000415!3.74e-07!2 | |ontology_enrichment_celltype=CL:1000507!1.10e-11!12;CL:1000494!1.10e-11!12;CL:1000449!3.36e-11!16;CL:0002541!6.63e-11!3;CL:0000066!2.37e-10!254;CL:1000497!8.47e-10!18;CL:0002518!8.47e-10!18;CL:0002681!4.36e-08!13;CL:0002584!4.36e-08!13;CL:1000415!3.74e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.15e-42;3!CL:0000349;1.56e-18;19!CL:0002537;2.99e-12;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.24e-42,3;CL:0000349,1.37e-18,19;CL:0002537,2.38e-12,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:4468!9.90e-08!2 | |ontology_enrichment_disease=DOID:4468!9.90e-08!2 | ||
|ontology_enrichment_disease_v019=DOID:3111;1.92e-15;1!DOID:3603;1.92e-15;1!DOID:299;1.89e-09;25!DOID:4929;1.24e-08;2!DOID:4468;2.23e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,2.75e-15,1;DOID:3603,2.75e-15,1;DOID:299,1.85e-09,25;DOID:4929,1.20e-08,2;DOID:4468,1.73e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000058!7.07e-15!26;UBERON:0009773!1.10e-11!12;UBERON:0001231!1.10e-11!12;UBERON:0004810!1.10e-11!12;UBERON:0002294!2.48e-11!7;UBERON:0001173!2.48e-11!7;UBERON:0004912!2.48e-11!7;UBERON:0004211!3.36e-11!16;UBERON:0001285!3.36e-11!16;UBERON:0007684!3.36e-11!16;UBERON:0003220!3.36e-11!16;UBERON:0004208!3.36e-11!16;UBERON:0000476!6.63e-11!3;UBERON:0000920!6.63e-11!3;UBERON:0005631!1.15e-10!14;UBERON:0000158!1.15e-10!14;UBERON:0006555!1.86e-10!17;UBERON:0005103!1.86e-10!17;UBERON:0000083!1.86e-10!17;UBERON:0009201!1.86e-10!17;UBERON:0004819!1.86e-10!17;UBERON:0006553!1.86e-10!17;UBERON:0003074!1.86e-10!17;UBERON:0003060!1.86e-10!17;UBERON:0000080!8.47e-10!18;UBERON:0002120!8.47e-10!18;UBERON:0004875!8.47e-10!18;UBERON:0005721!8.47e-10!18;UBERON:0005754!8.47e-10!18;UBERON:0007297!8.47e-10!18;UBERON:0003064!2.75e-09!37;UBERON:0006554!8.67e-09!44;UBERON:0004876!1.11e-08!20;UBERON:0001008!1.57e-08!45;UBERON:0003887!3.36e-08!21;UBERON:0001225!4.36e-08!13;UBERON:0008987!4.36e-08!13;UBERON:0002394!5.27e-08!4;UBERON:0003928!5.27e-08!4;UBERON:0003124!7.88e-08!7;UBERON:0005911!8.55e-08!82;UBERON:0004119!9.85e-08!169;UBERON:0000925!9.85e-08!169;UBERON:0006595!9.85e-08!169;UBERON:0000466!3.74e-07!126;UBERON:0000341!6.50e-07!2;UBERON:0000464!8.02e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.15e-42;3!UBERON:0000920;1.15e-42;3!UBERON:0005631;4.41e-35;10!UBERON:0000158;4.41e-35;10!UBERON:0004913;5.98e-16;1!UBERON:0003703;5.98e-16;1!UBERON:0001174;5.98e-16;1!UBERON:0004914;5.98e-16;1!UBERON:0002394;1.44e-15;4!UBERON:0003928;1.44e-15;4!UBERON:0000478;1.10e-14;24!UBERON:0002294;2.69e-09;7!UBERON:0001173;2.69e-09;7!UBERON:0000305;5.15e-09;7!UBERON:0000058;9.22e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.24e-42,3;UBERON:0005631,3.46e-25,14;UBERON:0000158,3.46e-25,14;UBERON:0003124,1.03e-18,7;UBERON:0004913,5.56e-16,1;UBERON:0003703,5.56e-16,1;UBERON:0001174,5.56e-16,1;UBERON:0004914,5.56e-16,1;UBERON:0000478,9.91e-15,24;UBERON:0002394,1.07e-10,6;UBERON:0003928,1.07e-10,6;UBERON:0000305,4.39e-09,7;UBERON:0004871,4.66e-08,8;UBERON:0004923,2.01e-07,66;UBERON:0002294,2.02e-07,9;UBERON:0001173,2.02e-07,9;UBERON:0004912,2.02e-07,9;UBERON:0000058,2.04e-07,19 | |||
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| ||
|short_description=p8@CST6 | |short_description=p8@CST6 | ||
}} | }} |
Latest revision as of 12:50, 19 September 2015
Short description: | p8@CST6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CST6_5end |
Coexpression cluster: | C1349_Alveolar_bile_chorionic_clear_amniotic_papillotubular_serous |
Association with transcript: | 66bp_to_ENST00000312134_5end |
EntrezGene: | CST6 |
HGNC: | 2478 |
UniProt: | Q15828 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.24e-42 | 3 |
extraembryonic cell | 1.37e-18 | 19 |
amnion mesenchymal stem cell | 2.38e-12 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.24e-42 | 3 |
extraembryonic membrane | 3.46e-25 | 14 |
membranous layer | 3.46e-25 | 14 |
chorion | 1.03e-18 | 7 |
hepatopancreatic ampulla | 5.56e-16 | 1 |
extrahepatic bile duct | 5.56e-16 | 1 |
common bile duct | 5.56e-16 | 1 |
duodenal papilla | 5.56e-16 | 1 |
extraembryonic structure | 9.91e-15 | 24 |
bile duct | 1.07e-10 | 6 |
digestive system duct | 1.07e-10 | 6 |
amnion | 4.39e-09 | 7 |
somatic layer of lateral plate mesoderm | 4.66e-08 | 8 |
organ component layer | 2.01e-07 | 66 |
biliary system | 2.02e-07 | 9 |
biliary tree | 2.02e-07 | 9 |
biliary bud | 2.02e-07 | 9 |
duct | 2.04e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 2.75e-15 | 1 |
mucinous cystadenocarcinoma | 2.75e-15 | 1 |
adenocarcinoma | 1.85e-09 | 25 |
tubular adenocarcinoma | 1.20e-08 | 2 |
clear cell adenocarcinoma | 1.73e-08 | 2 |