FFCP PHASE1:Hg19::chr11:65851443..65851457,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55690 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30032 | |||
|TSSclassifier=strong | |||
|UniProt=E9PNG7 | |||
|association_with_transcript=0bp_to_ENST00000533756_5end | |||
|cluster_id=chr11:65851443..65851457,+ | |||
|coexpression_cluster_id=C37 | |||
|description=CAGE_peak_25_at_PACS1_5end | |||
|id=chr11:65851443..65851457,+ | |||
|ontology_enrichment_celltype=CL:0002580!9.40e-09!3;CL:0002557!5.84e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0002548;9.23e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002548,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006298;2.58e-34;1!UBERON:0008801;4.27e-34;1!UBERON:0006595;1.46e-07;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!1.25e-18!11;UBERON:0000078!1.12e-15!18;UBERON:0001042!2.18e-14!10;UBERON:0009145!2.18e-14!10;UBERON:0001829!1.15e-13!2;UBERON:0003127!1.30e-13!2;UBERON:0000166!2.69e-13!21;UBERON:0001044!4.43e-10!6;UBERON:0003293!4.43e-10!6;UBERON:0003294!4.43e-10!6;UBERON:0010047!4.43e-10!6;UBERON:0000167!4.43e-10!6;UBERON:0003408!5.31e-10!10;UBERON:0000165!9.50e-10!28;UBERON:0000930!9.50e-10!28;UBERON:0001723!4.25e-09!3;UBERON:0001033!4.25e-09!3;UBERON:0010056!4.25e-09!3;UBERON:0001004!5.01e-08!72;UBERON:0001736!1.06e-07!1;UBERON:0006298!1.06e-07!1;UBERON:0001831!1.20e-07!1;UBERON:0001567!1.20e-07!1;UBERON:0008801!1.20e-07!1;UBERON:0000161!1.28e-07!35;UBERON:0001557!1.79e-07!19;UBERON:0002146!3.21e-07!1;UBERON:0005623!3.21e-07!1;UBERON:0002372!4.89e-07!1;UBERON:0001961!4.89e-07!1;UBERON:0001744!4.89e-07!1;UBERON:0001735!4.89e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;1.72e-66;2!UBERON:0003127;5.53e-66;2!UBERON:0001044;4.18e-50;6!UBERON:0003293;4.18e-50;6!UBERON:0003294;4.18e-50;6!UBERON:0010047;4.18e-50;6!UBERON:0003408;4.18e-50;6!UBERON:0000167;4.18e-50;6!UBERON:0001736;2.58e-34;1!UBERON:0001831;4.27e-34;1!UBERON:0001567;4.27e-34;1!UBERON:0001041;4.84e-22;14!UBERON:0003126;9.49e-20;7!UBERON:0001005;9.49e-20;7!UBERON:0004089;8.34e-18;2!UBERON:0000161;1.79e-16;19!UBERON:0000166;1.79e-16;19!UBERON:0000165;1.95e-11;28!UBERON:0002365;3.45e-10;31!UBERON:0002330;3.45e-10;31!UBERON:0007196;8.85e-10;15!UBERON:0001558;8.85e-10;15!UBERON:0004921;1.37e-08;33!UBERON:0001004;4.23e-08;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,2.03e-66,2;UBERON:0003127,3.96e-66,2;UBERON:0001044,4.55e-50,6;UBERON:0003293,4.55e-50,6;UBERON:0003294,4.55e-50,6;UBERON:0010047,4.55e-50,6;UBERON:0000167,4.55e-50,6;UBERON:0001736,2.58e-34,1;UBERON:0006298,2.58e-34,1;UBERON:0001831,5.05e-34,1;UBERON:0001567,5.05e-34,1;UBERON:0008801,5.05e-34,1;UBERON:0003408,1.86e-30,10;UBERON:0003126,8.62e-20,7;UBERON:0001005,8.62e-20,7;UBERON:0004089,9.07e-18,2;UBERON:0000166,2.49e-14,22;UBERON:0001004,1.22e-11,74;UBERON:0000165,4.64e-11,29;UBERON:0000930,4.64e-11,29;UBERON:0002365,2.15e-10,31;UBERON:0002330,2.15e-10,31;UBERON:0001041,5.77e-10,87;UBERON:0007196,8.46e-10,15;UBERON:0001558,8.46e-10,15;UBERON:0000161,4.73e-09,36;UBERON:0004921,2.19e-07,118;UBERON:0001444,7.91e-07,49 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535081656179426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0.560677600142307,1.06748995729705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0.280660094433074,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.48257766857182,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.9995528585439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.4317127693725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.852935927603924,0,0,0.0620747142958579,0,0,0,0.435433495793923,0.684466602170562,0.134704106029175,1.5061663132462,5.98788641782824,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p25@PACS1 | |||
}} |
Latest revision as of 13:07, 19 September 2015
Short description: | p25@PACS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_PACS1_5end |
Coexpression cluster: | C37_salivary_submaxillary_parotid_seminal_tongue_ductus_trachea |
Association with transcript: | 0bp_to_ENST00000533756_5end |
EntrezGene: | PACS1 |
HGNC: | 30032 |
UniProt: | E9PNG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 2.03e-66 | 2 |
open tracheal system trachea | 3.96e-66 | 2 |
saliva-secreting gland | 4.55e-50 | 6 |
gland of oral region | 4.55e-50 | 6 |
gland of foregut | 4.55e-50 | 6 |
oral gland | 4.55e-50 | 6 |
oral cavity | 4.55e-50 | 6 |
submandibular gland | 2.58e-34 | 1 |
submandibular gland primordium | 2.58e-34 | 1 |
parotid gland | 5.05e-34 | 1 |
cheek | 5.05e-34 | 1 |
parotid gland primordium | 5.05e-34 | 1 |
gland of gut | 1.86e-30 | 10 |
trachea | 8.62e-20 | 7 |
respiratory airway | 8.62e-20 | 7 |
midface | 9.07e-18 | 2 |
oral opening | 2.49e-14 | 22 |
respiratory system | 1.22e-11 | 74 |
mouth | 4.64e-11 | 29 |
stomodeum | 4.64e-11 | 29 |
exocrine gland | 2.15e-10 | 31 |
exocrine system | 2.15e-10 | 31 |
foregut | 5.77e-10 | 87 |
tracheobronchial tree | 8.46e-10 | 15 |
lower respiratory tract | 8.46e-10 | 15 |
orifice | 4.73e-09 | 36 |
subdivision of digestive tract | 2.19e-07 | 118 |
subdivision of head | 7.91e-07 | 49 |