FFCP PHASE1:Hg19::chr11:65999337..65999347,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55690 | |EntrezGene=55690 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30032 | |HGNC=30032 | ||
|TSSclassifier=strong | |||
|UniProt=E9PNZ9 | |UniProt=E9PNZ9 | ||
|association_with_transcript=72bp_to_ENST00000528935_5end | |association_with_transcript=72bp_to_ENST00000528935_5end | ||
|cluster_id=chr11:65999337..65999347,+ | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_26_at_PACS1_5end | |description=CAGE_peak_26_at_PACS1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.79e-195;3 | |ontology_enrichment_development_v019=UBERON:0006215;2.79e-195;3 | ||
|ontology_enrichment_disease=DOID:12603!1.42e-13!1 | |ontology_enrichment_disease=DOID:12603!1.42e-13!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004733!3.20e-37!12;UBERON:0002028!3.20e-37!12;UBERON:0007277!3.20e-37!12;UBERON:0004732!2.39e-34!13;UBERON:0003076!9.49e-30!15;UBERON:0003057!9.49e-30!15;UBERON:0002680!8.37e-23!9;UBERON:0001895!8.37e-23!9;UBERON:0010092!8.37e-23!9;UBERON:0002037!8.04e-20!6;UBERON:0006215!8.04e-20!6;UBERON:0001896!2.11e-17!3;UBERON:0005290!2.11e-17!3;UBERON:0010096!2.11e-17!3;UBERON:0001049!2.03e-16!57;UBERON:0005068!2.03e-16!57;UBERON:0006241!2.03e-16!57;UBERON:0007135!2.03e-16!57;UBERON:0002616!7.73e-16!59;UBERON:0002298!1.77e-14!8;UBERON:0000073!3.67e-14!94;UBERON:0001016!3.67e-14!94;UBERON:0001017!1.18e-13!82;UBERON:0001874!1.61e-13!1;UBERON:0000955!3.13e-13!69;UBERON:0006238!3.13e-13!69;UBERON:0003075!3.83e-13!86;UBERON:0007284!3.83e-13!86;UBERON:0005743!5.57e-13!86;UBERON:0002346!1.64e-12!90;UBERON:0007023!9.57e-12!115;UBERON:0002360!1.54e-07!2;UBERON:0000094!1.54e-07!2;UBERON:0007645!1.54e-07!2;UBERON:0001897!1.64e-07!2;UBERON:0004121!2.28e-07!169;UBERON:0000924!3.63e-07!173;UBERON:0006601!3.63e-07!173;UBERON:0000033!4.65e-07!123 | |ontology_enrichment_uberon=UBERON:0004733!3.20e-37!12;UBERON:0002028!3.20e-37!12;UBERON:0007277!3.20e-37!12;UBERON:0004732!2.39e-34!13;UBERON:0003076!9.49e-30!15;UBERON:0003057!9.49e-30!15;UBERON:0002680!8.37e-23!9;UBERON:0001895!8.37e-23!9;UBERON:0010092!8.37e-23!9;UBERON:0002037!8.04e-20!6;UBERON:0006215!8.04e-20!6;UBERON:0001896!2.11e-17!3;UBERON:0005290!2.11e-17!3;UBERON:0010096!2.11e-17!3;UBERON:0001049!2.03e-16!57;UBERON:0005068!2.03e-16!57;UBERON:0006241!2.03e-16!57;UBERON:0007135!2.03e-16!57;UBERON:0002616!7.73e-16!59;UBERON:0002298!1.77e-14!8;UBERON:0000073!3.67e-14!94;UBERON:0001016!3.67e-14!94;UBERON:0001017!1.18e-13!82;UBERON:0001874!1.61e-13!1;UBERON:0000955!3.13e-13!69;UBERON:0006238!3.13e-13!69;UBERON:0003075!3.83e-13!86;UBERON:0007284!3.83e-13!86;UBERON:0005743!5.57e-13!86;UBERON:0002346!1.64e-12!90;UBERON:0007023!9.57e-12!115;UBERON:0002360!1.54e-07!2;UBERON:0000094!1.54e-07!2;UBERON:0007645!1.54e-07!2;UBERON:0001897!1.64e-07!2;UBERON:0004121!2.28e-07!169;UBERON:0000924!3.63e-07!173;UBERON:0006601!3.63e-07!173;UBERON:0000033!4.65e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.83e-98;6!UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000073;8.17e-09;53!UBERON:0002616;8.17e-09;53!UBERON:0001016;9.22e-08;83!UBERON:0000955;1.63e-07;68!UBERON:0001017;8.58e-07;75 | |ontology_enrichment_uberon_v019=UBERON:0002037;1.83e-98;6!UBERON:0002680;3.75e-66;9!UBERON:0001895;3.75e-66;9!UBERON:0004733;5.59e-50;12!UBERON:0002028;5.59e-50;12!UBERON:0004732;3.04e-46;13!UBERON:0000073;8.17e-09;53!UBERON:0002616;8.17e-09;53!UBERON:0001016;9.22e-08;83!UBERON:0000955;1.63e-07;68!UBERON:0001017;8.58e-07;75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.83e-98,6;UBERON:0006215,1.83e-98,6;UBERON:0002680,3.75e-66,9;UBERON:0001895,3.75e-66,9;UBERON:0010092,3.75e-66,9;UBERON:0004733,5.59e-50,12;UBERON:0002028,5.59e-50,12;UBERON:0007277,5.59e-50,12;UBERON:0004732,3.04e-46,13;UBERON:0003076,2.90e-40,15;UBERON:0003057,2.90e-40,15;UBERON:0000073,4.68e-12,53;UBERON:0002616,4.68e-12,53;UBERON:0001049,1.77e-11,56;UBERON:0005068,1.77e-11,56;UBERON:0006241,1.77e-11,56;UBERON:0007135,1.77e-11,56;UBERON:0000955,1.53e-09,68;UBERON:0006238,1.53e-09,68;UBERON:0001017,3.31e-08,81;UBERON:0003075,3.31e-08,82;UBERON:0007284,3.31e-08,82;UBERON:0002346,7.10e-08,86;UBERON:0001016,1.68e-07,89 | |||
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|short_description=p26@PACS1 | |short_description=p26@PACS1 | ||
}} | }} |
Latest revision as of 13:10, 19 September 2015
Short description: | p26@PACS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_PACS1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 72bp_to_ENST00000528935_5end |
EntrezGene: | PACS1 |
HGNC: | 30032 |
UniProt: | E9PNZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.83e-98 | 6 |
rhombic lip | 1.83e-98 | 6 |
regional part of metencephalon | 3.75e-66 | 9 |
metencephalon | 3.75e-66 | 9 |
future metencephalon | 3.75e-66 | 9 |
segmental subdivision of hindbrain | 5.59e-50 | 12 |
hindbrain | 5.59e-50 | 12 |
presumptive hindbrain | 5.59e-50 | 12 |
segmental subdivision of nervous system | 3.04e-46 | 13 |
posterior neural tube | 2.90e-40 | 15 |
chordal neural plate | 2.90e-40 | 15 |
regional part of nervous system | 4.68e-12 | 53 |
regional part of brain | 4.68e-12 | 53 |
neural tube | 1.77e-11 | 56 |
neural rod | 1.77e-11 | 56 |
future spinal cord | 1.77e-11 | 56 |
neural keel | 1.77e-11 | 56 |
brain | 1.53e-09 | 68 |
future brain | 1.53e-09 | 68 |
central nervous system | 3.31e-08 | 81 |
neural plate | 3.31e-08 | 82 |
presumptive neural plate | 3.31e-08 | 82 |
neurectoderm | 7.10e-08 | 86 |
nervous system | 1.68e-07 | 89 |