FFCP PHASE2:Hg19::chr19:51357959..51357992,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:354 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6364 |TSSclassi...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=354 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6364 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P07288,G3XAE3,G3V0H4,C9JXH3,Q15096,Q546G3,Q8NCW4 | ||
|association_with_transcript=-178bp_to_ENST00000326003,ENST00000360617,ENST00000422986,ENST00000435152,NM_001030047,NM_001030048,NM_001030050,NM_001648,uc002ptp.1,uc002ptr.1,uc002pts.1,uc010eof.1,uc010ycj.1_5end | |association_with_transcript=-178bp_to_ENST00000326003,ENST00000360617,ENST00000422986,ENST00000435152,NM_001030047,NM_001030048,NM_001030050,NM_001648,uc002ptp.1,uc002ptr.1,uc002pts.1,uc010eof.1,uc010ycj.1_5end | ||
|cluster_id=chr19:51357959..51357992,+ | |cluster_id=chr19:51357959..51357992,+ |
Latest revision as of 13:13, 19 September 2015
Short description: | p2@KLK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KLK3_5end |
Coexpression cluster: | C245_prostate_penis_salivary_esophagus_kidney_Neutrophils_Pancreatic |
Association with transcript: | -178bp_to_ENST00000326003, ENST00000360617, ENST00000422986, ENST00000435152, NM_001030047, NM_001030048, NM_001030050, NM_001648, uc002ptp.1, uc002ptr.1, uc002pts.1, uc010eof.1, uc010ycj.1_5end |
EntrezGene: | KLK3 |
HGNC: | 6364 |
UniProt: | P07288G3XAE3G3V0H4C9JXH3Q15096Q546G3Q8NCW4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p2@KLK3 |
---|
0
1
2
3
4
5
6
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
prostate gland | 2.25e-19 | 11 |
male accessory sex gland | 2.25e-19 | 11 |
embryonic cloacal epithelium | 2.25e-19 | 11 |
epithelium of hindgut | 2.25e-19 | 11 |
urogenital sinus epithelium | 2.25e-19 | 11 |
prostate bud | 2.25e-19 | 11 |
prostate field | 2.25e-19 | 11 |
sex gland | 6.76e-18 | 12 |
male reproductive gland | 6.76e-18 | 12 |
cloaca | 1.43e-15 | 14 |
Showing 1 to 10 of 23 entries