Personal tools

FFCP PHASE2:Hg19::chr19:51357959..51357992,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:354 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6364 |TSSclassi...")
 
No edit summary
 
Line 2: Line 2:
|DHSsupport=supported   
|DHSsupport=supported   
|DPIdataset=robust
|DPIdataset=robust
|EntrezGene=entrezgene:354
|EntrezGene=354
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=HGNC:6364
|HGNC=6364
|TSSclassifier=strong
|TSSclassifier=strong
|UniProt=uniprot:P07288,uniprot:G3XAE3,uniprot:G3V0H4,uniprot:C9JXH3,uniprot:Q15096,uniprot:Q546G3,uniprot:Q8NCW4
|UniProt=P07288,G3XAE3,G3V0H4,C9JXH3,Q15096,Q546G3,Q8NCW4
|association_with_transcript=-178bp_to_ENST00000326003,ENST00000360617,ENST00000422986,ENST00000435152,NM_001030047,NM_001030048,NM_001030050,NM_001648,uc002ptp.1,uc002ptr.1,uc002pts.1,uc010eof.1,uc010ycj.1_5end
|association_with_transcript=-178bp_to_ENST00000326003,ENST00000360617,ENST00000422986,ENST00000435152,NM_001030047,NM_001030048,NM_001030050,NM_001648,uc002ptp.1,uc002ptr.1,uc002pts.1,uc010eof.1,uc010ycj.1_5end
|cluster_id=chr19:51357959..51357992,+
|cluster_id=chr19:51357959..51357992,+

Latest revision as of 13:13, 19 September 2015

Short description:p2@KLK3
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_2_at_KLK3_5end
Coexpression cluster:C245_prostate_penis_salivary_esophagus_kidney_Neutrophils_Pancreatic
Association with transcript: -178bp_to_ENST00000326003, ENST00000360617, ENST00000422986, ENST00000435152, NM_001030047, NM_001030048, NM_001030050, NM_001648, uc002ptp.1, uc002ptr.1, uc002pts.1, uc010eof.1, uc010ycj.1_5end
EntrezGene:KLK3
HGNC: 6364
UniProt: P07288G3XAE3G3V0H4C9JXH3Q15096Q546G3Q8NCW4
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
1
2
3
4
5
6




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data