FFCP PHASE1:Hg19::chr11:66056544..66056560,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:66056544..66056560,- to FFCP PHASE1:Hg19::chr11:66056544..66056560,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10897 | |EntrezGene=10897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16688 | |HGNC=16688 | ||
|TSSclassifier=strong | |||
|UniProt=E9PIZ0 | |UniProt=E9PIZ0 | ||
|association_with_transcript=-36bp_to_ENST00000528575_5end | |||
|cluster_id=chr11:66056544..66056560,- | |||
|coexpression_cluster_id=C562 | |||
|description=CAGE_peak_4_at_YIF1A_5end | |||
|id=chr11:66056544..66056560,- | |||
|ontology_enrichment_celltype=CL:0000055!4.90e-36!180;CL:0000548!8.14e-22!679;CL:0000004!8.14e-22!679;CL:0000255!8.14e-22!679;CL:0000012!3.25e-21!682;CL:0000183!2.76e-20!59;CL:0000220!2.46e-19!246;CL:0000680!4.04e-19!57;CL:0000056!4.04e-19!57;CL:0000355!4.04e-19!57;CL:0002321!5.26e-19!248;CL:0000187!2.00e-18!54;CL:0000192!8.78e-18!42;CL:0000514!8.78e-18!42;CL:0000057!9.31e-18!75;CL:0000222!1.23e-16!119;CL:0000393!3.35e-16!60;CL:0000211!3.35e-16!60;CL:0000144!8.27e-16!625;CL:0000359!4.96e-15!32;CL:0002371!3.00e-14!591;CL:0000003!1.28e-09!722;CL:0000066!1.79e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.28e-14;32!CL:0000192;1.44e-12;43!CL:0000187;1.42e-10;55!CL:0000393;3.34e-08;61!CL:0000211;3.34e-08;61!CL:0000057;4.47e-08;73!CL:0000134;2.51e-07;55!CL:0002320;8.17e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.62e-19,250;CL:0000680,7.59e-19,58;CL:0000056,7.59e-19,58;CL:0000355,7.59e-19,58;CL:0000057,3.57e-18,76;CL:0000187,3.81e-18,55;CL:0000192,2.01e-17,43;CL:0000514,2.01e-17,43;CL:0000222,8.94e-17,121;CL:0000393,6.83e-16,61;CL:0000211,6.83e-16,61;CL:0000359,4.48e-15,32;CL:0000066,1.71e-08,253 | |||
|ontology_enrichment_development_v019=CL:0000514;1.44e-12;43!CL:0000355;2.88e-10;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.62e-22!143;UBERON:0002100!8.02e-22!216;UBERON:0004290!7.54e-20!70;UBERON:0000490!8.37e-20!138;UBERON:0000914!9.53e-20!83;UBERON:0002329!9.53e-20!83;UBERON:0003077!9.53e-20!83;UBERON:0003059!9.53e-20!83;UBERON:0007282!9.53e-20!83;UBERON:0009618!9.53e-20!83;UBERON:0007285!9.53e-20!83;UBERON:0003104!5.85e-18!238;UBERON:0009142!5.85e-18!238;UBERON:0003914!6.75e-18!118;UBERON:0000486!1.73e-17!82;UBERON:0001134!2.29e-16!61;UBERON:0002036!2.29e-16!61;UBERON:0003082!2.29e-16!61;UBERON:0002385!2.31e-15!63;UBERON:0001015!2.31e-15!63;UBERON:0000383!2.31e-15!63;UBERON:0002049!2.50e-14!79;UBERON:0007798!2.50e-14!79;UBERON:0001637!3.58e-14!42;UBERON:0003509!3.58e-14!42;UBERON:0004572!3.58e-14!42;UBERON:0000475!8.63e-14!365;UBERON:0004872!2.43e-13!84;UBERON:0001981!8.77e-13!60;UBERON:0007500!8.77e-13!60;UBERON:0004537!8.77e-13!60;UBERON:0006965!8.77e-13!60;UBERON:0000055!1.34e-12!69;UBERON:0004573!1.19e-11!33;UBERON:0004571!1.19e-11!33;UBERON:0000481!6.44e-11!347;UBERON:0000119!1.24e-10!312;UBERON:0009569!1.83e-10!113;UBERON:0000483!2.26e-10!309;UBERON:0002199!3.27e-09!45;UBERON:0002416!3.27e-09!45;UBERON:0004535!5.90e-09!110;UBERON:0001009!2.01e-08!113;UBERON:0000477!1.66e-07!286;UBERON:0003102!2.04e-07!95;UBERON:0002097!2.74e-07!40;UBERON:0001013!3.08e-07!14;UBERON:0002107!5.67e-07!19;UBERON:0006925!5.67e-07!19;UBERON:0008836!5.67e-07!19;UBERON:0002417!5.80e-07!61;UBERON:0000916!5.80e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;1.48e-10;33!UBERON:0004571;1.48e-10;33!UBERON:0001637;5.95e-10;42!UBERON:0003509;5.95e-10;42!UBERON:0004572;5.95e-10;42!UBERON:0007500;4.53e-08;56!UBERON:0001981;4.53e-08;56!UBERON:0004537;4.53e-08;56!UBERON:0001013;2.76e-07;14!UBERON:0003914;5.55e-07;74!UBERON:0002107;6.67e-07;19!UBERON:0006925;6.67e-07;19 | |||
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| ||
|short_description=p4@YIF1A | |||
}} | }} |
Latest revision as of 13:39, 19 September 2015
Short description: | p4@YIF1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_YIF1A_5end |
Coexpression cluster: | C562_Smooth_Fibroblast_Preadipocyte_Hepatic_Alveolar_Adipocyte_Mesenchymal |
Association with transcript: | -36bp_to_ENST00000528575_5end |
EntrezGene: | YIF1A |
HGNC: | 16688 |
UniProt: | E9PIZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.62e-19 | 250 |
muscle precursor cell | 7.59e-19 | 58 |
myoblast | 7.59e-19 | 58 |
multi-potent skeletal muscle stem cell | 7.59e-19 | 58 |
fibroblast | 3.57e-18 | 76 |
muscle cell | 3.81e-18 | 55 |
smooth muscle cell | 2.01e-17 | 43 |
smooth muscle myoblast | 2.01e-17 | 43 |
mesodermal cell | 8.94e-17 | 121 |
electrically responsive cell | 6.83e-16 | 61 |
electrically active cell | 6.83e-16 | 61 |
vascular associated smooth muscle cell | 4.48e-15 | 32 |
epithelial cell | 1.71e-08 | 253 |