FFCP PHASE1:Hg19::chr5:10307874..10307930,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:10307874..10307930,-
|short_description=p2@CMBL
|description=CAGE_peak_2_at_CMBL_5end
|association_with_transcript=20bp_to_ENST00000514202_5end
|EntrezGen...") |
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(13 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=134147 | |EntrezGene=134147 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25090 | |HGNC=25090 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=20bp_to_ENST00000514202_5end | |||
|cluster_id=chr5:10307874..10307930,- | |||
|coexpression_cluster_id=C4444 | |||
|description=CAGE_peak_2_at_CMBL_5end | |||
|id=chr5:10307874..10307930,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003104;2.45e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!5.66e-19!347;UBERON:0000475!2.87e-13!365;UBERON:0003104!7.48e-12!238;UBERON:0009142!7.48e-12!238;UBERON:0000468!2.60e-10!659;UBERON:0002100!2.94e-10!216;UBERON:0000477!2.12e-09!286;UBERON:0005256!1.17e-08!143;UBERON:0000119!1.23e-08!312;UBERON:0000483!2.69e-08!309;UBERON:0000922!1.02e-07!612;UBERON:0000062!1.19e-07!511;UBERON:0001007!1.21e-07!155;UBERON:0001555!1.21e-07!155;UBERON:0007026!1.21e-07!155;UBERON:0000467!1.78e-07!625;UBERON:0000490!1.80e-07!138;UBERON:0004921!2.15e-07!129;UBERON:0004185!2.15e-07!129;UBERON:0000480!2.39e-07!626;UBERON:0002050!2.44e-07!605;UBERON:0005423!2.44e-07!605;UBERON:0000923!3.70e-07!604;UBERON:0005291!3.70e-07!604;UBERON:0006598!3.70e-07!604;UBERON:0002532!3.70e-07!604 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,9.44e-14,160;UBERON:0009142,9.44e-14,160;UBERON:0002100,4.66e-09,199;UBERON:0005256,1.13e-08,122;UBERON:0011216,3.86e-08,223;UBERON:0000119,3.98e-08,309;UBERON:0000490,7.55e-08,148;UBERON:0000483,8.56e-08,306 | |||
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| ||
|short_description=p2@CMBL | |||
}} | }} |
Latest revision as of 13:40, 19 September 2015
Short description: | p2@CMBL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CMBL_5end |
Coexpression cluster: | C4444_Nucleus_small_Pericytes_Anulus_colon_skeletal_lung |
Association with transcript: | 20bp_to_ENST00000514202_5end |
EntrezGene: | CMBL |
HGNC: | 25090 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchyme | 9.44e-14 | 160 |
entire embryonic mesenchyme | 9.44e-14 | 160 |
trunk | 4.66e-09 | 199 |
trunk mesenchyme | 1.13e-08 | 122 |
organ system subdivision | 3.86e-08 | 223 |
cell layer | 3.98e-08 | 309 |
unilaminar epithelium | 7.55e-08 | 148 |
epithelium | 8.56e-08 | 306 |