FFCP PHASE1:Hg19::chr3:112218278..112218292,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151888 | |EntrezGene=151888 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21087 | |HGNC=21087 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-73bp_to_ENST00000383680_5end | |association_with_transcript=-73bp_to_ENST00000383680_5end | ||
|cluster_id=chr3:112218278..112218292,- | |||
|coexpression_cluster_id=C47 | |coexpression_cluster_id=C47 | ||
|description=CAGE_peak_5_at_BTLA_5end | |description=CAGE_peak_5_at_BTLA_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000542!2.74e-46!53;CL:0000051!2.74e-46!53;CL:0000838!2.48e-44!52;CL:0000945!1.94e-37!24;CL:0000826!1.94e-37!24;CL:0000236!7.78e-32!14;CL:0000738!8.47e-26!140;CL:0002087!8.55e-26!119;CL:0000037!7.15e-20!172;CL:0000566!7.15e-20!172;CL:0002031!6.05e-19!124;CL:0000988!4.01e-18!182;CL:0000791!4.26e-15!18;CL:0000789!4.26e-15!18;CL:0002420!4.26e-15!18;CL:0002419!4.26e-15!18;CL:0000790!4.26e-15!18;CL:0000625!4.63e-14!11;CL:0002032!1.18e-13!165;CL:0000837!1.18e-13!165;CL:0000084!3.59e-10!25;CL:0000827!3.59e-10!25;CL:0000784!2.67e-09!3;CL:0000842!9.73e-08!3 | |ontology_enrichment_celltype=CL:0000542!2.74e-46!53;CL:0000051!2.74e-46!53;CL:0000838!2.48e-44!52;CL:0000945!1.94e-37!24;CL:0000826!1.94e-37!24;CL:0000236!7.78e-32!14;CL:0000738!8.47e-26!140;CL:0002087!8.55e-26!119;CL:0000037!7.15e-20!172;CL:0000566!7.15e-20!172;CL:0002031!6.05e-19!124;CL:0000988!4.01e-18!182;CL:0000791!4.26e-15!18;CL:0000789!4.26e-15!18;CL:0002420!4.26e-15!18;CL:0002419!4.26e-15!18;CL:0000790!4.26e-15!18;CL:0000625!4.63e-14!11;CL:0002032!1.18e-13!165;CL:0000837!1.18e-13!165;CL:0000084!3.59e-10!25;CL:0000827!3.59e-10!25;CL:0000784!2.67e-09!3;CL:0000842!9.73e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;7.24e-53;24!CL:0000236;9.65e-48;13!CL:0000542;6.38e-27;53!CL:0000784;2.84e-16;3!CL:0000625;5.98e-11;11!CL:0000791;3.08e-09;18!CL:0000789;3.08e-09;18!CL:0002419;3.08e-09;18!CL:0002087;5.58e-07;104 | |ontology_enrichment_celltype_v019=CL:0000945;7.24e-53;24!CL:0000236;9.65e-48;13!CL:0000542;6.38e-27;53!CL:0000784;2.84e-16;3!CL:0000625;5.98e-11;11!CL:0000791;3.08e-09;18!CL:0000789;3.08e-09;18!CL:0002419;3.08e-09;18!CL:0002087;5.58e-07;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.77e-53,24;CL:0000826,9.77e-53,24;CL:0000236,5.19e-52,14;CL:0000838,3.32e-43,52;CL:0000542,2.70e-42,53;CL:0000051,2.70e-42,53;CL:0002087,3.10e-20,115;CL:0000738,9.82e-20,136;CL:0002031,3.56e-19,120;CL:0000784,2.50e-16,3;CL:0000037,6.69e-15,168;CL:0000988,7.41e-14,177;CL:0002032,5.84e-13,161;CL:0000837,5.84e-13,161;CL:0000625,3.88e-11,11;CL:0000791,2.35e-09,18;CL:0000789,2.35e-09,18;CL:0002420,2.35e-09,18;CL:0002419,2.35e-09,18;CL:0000790,2.35e-09,18 | |||
|ontology_enrichment_development_v019=CL:0000051;6.38e-27;53!CL:0000790;3.08e-09;18 | |ontology_enrichment_development_v019=CL:0000051;6.38e-27;53!CL:0000790;3.08e-09;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.36e-12!15;UBERON:0000179!3.36e-12!15;UBERON:0000463!3.36e-12!15;UBERON:0004177!4.00e-09!7 | |ontology_enrichment_uberon=UBERON:0000178!3.36e-12!15;UBERON:0000179!3.36e-12!15;UBERON:0000463!3.36e-12!15;UBERON:0004177!4.00e-09!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.12e-10;2!UBERON:0005058;1.12e-10;2!UBERON:0009113;1.12e-10;2 | |ontology_enrichment_uberon_v019=UBERON:0002370;1.12e-10;2!UBERON:0005058;1.12e-10;2!UBERON:0009113;1.12e-10;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.39e-11,4;UBERON:0005058,2.39e-11,4;UBERON:0009113,2.39e-11,4;UBERON:0003295,2.39e-11,4;UBERON:0005562,2.39e-11,4;UBERON:0003408,6.42e-08,10;UBERON:0001042,7.19e-08,10;UBERON:0009145,7.19e-08,10;UBERON:0003351,1.00e-07,6;UBERON:0006562,3.66e-07,11 | |||
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| ||
|short_description=p5@BTLA | |short_description=p5@BTLA | ||
}} | }} |
Latest revision as of 13:41, 19 September 2015
Short description: | p5@BTLA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_BTLA_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -73bp_to_ENST00000383680_5end |
EntrezGene: | BTLA |
HGNC: | 21087 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.77e-53 | 24 |
pro-B cell | 9.77e-53 | 24 |
B cell | 5.19e-52 | 14 |
lymphoid lineage restricted progenitor cell | 3.32e-43 | 52 |
lymphocyte | 2.70e-42 | 53 |
common lymphoid progenitor | 2.70e-42 | 53 |
nongranular leukocyte | 3.10e-20 | 115 |
leukocyte | 9.82e-20 | 136 |
hematopoietic lineage restricted progenitor cell | 3.56e-19 | 120 |
plasmacytoid dendritic cell | 2.50e-16 | 3 |
hematopoietic stem cell | 6.69e-15 | 168 |
hematopoietic cell | 7.41e-14 | 177 |
hematopoietic oligopotent progenitor cell | 5.84e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.84e-13 | 161 |
CD8-positive, alpha-beta T cell | 3.88e-11 | 11 |
mature alpha-beta T cell | 2.35e-09 | 18 |
alpha-beta T cell | 2.35e-09 | 18 |
immature T cell | 2.35e-09 | 18 |
mature T cell | 2.35e-09 | 18 |
immature alpha-beta T cell | 2.35e-09 | 18 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.39e-11 | 4 |
hemolymphoid system gland | 2.39e-11 | 4 |
thymic region | 2.39e-11 | 4 |
pharyngeal gland | 2.39e-11 | 4 |
thymus primordium | 2.39e-11 | 4 |
gland of gut | 6.42e-08 | 10 |
chordate pharynx | 7.19e-08 | 10 |
pharyngeal region of foregut | 7.19e-08 | 10 |
pharyngeal epithelium | 1.00e-07 | 6 |
pharynx | 3.66e-07 | 11 |