FFCP PHASE1:Hg19::chr2:202562749..202562760,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:202562749..202562760,- to FFCP PHASE1:Hg19::chr2:202562749..202562760,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=58538 | |EntrezGene=58538 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13680 | |HGNC=13680 | ||
|TSSclassifier=strong | |||
|UniProt=E9PG92 | |UniProt=E9PG92 | ||
|association_with_transcript=19bp_to_ENST00000396886,uc002uyj.3,uc010zhr.1,uc010zhs.1,uc010zht.1_5end | |||
|cluster_id=chr2:202562749..202562760,- | |||
|description=CAGE_peak_7_at_MPP4_5end | |||
|id=chr2:202562749..202562760,- | |||
|ontology_enrichment_celltype=CL:0000055!3.08e-21!180;CL:0000680!1.63e-15!57;CL:0000056!1.63e-15!57;CL:0000355!1.63e-15!57;CL:0000183!1.66e-14!59;CL:0000187!6.05e-13!54;CL:0000222!4.21e-12!119;CL:0000393!7.48e-12!60;CL:0000211!7.48e-12!60;CL:0002371!5.52e-10!591;CL:0000359!1.17e-09!32;CL:0000192!1.62e-09!42;CL:0000514!1.62e-09!42;CL:0000144!2.74e-09!625;CL:0000057!3.87e-09!75;CL:0002595!1.48e-08!5;CL:0000548!2.27e-07!679;CL:0000004!2.27e-07!679;CL:0000255!2.27e-07!679;CL:0000012!3.39e-07!682;CL:0000048!3.69e-07!430;CL:0000220!4.59e-07!246;CL:0000515!6.18e-07!4;CL:0000188!6.58e-07!9;CL:0002321!6.75e-07!248;CL:0000723!8.92e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000708;1.49e-40;3!CL:0000228;1.40e-14;1!CL:0002372;1.40e-14;1!CL:0000359;7.83e-14;32!CL:0002595;1.50e-11;5!CL:0000327;1.27e-08;15!CL:0000192;2.58e-08;43!CL:0002583;6.14e-08;2!CL:0002589;6.14e-08;2!CL:0002593;6.14e-08;2!CL:0000187;1.69e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,1.14e-40,3;CL:0000228,6.22e-15,1;CL:0002372,6.22e-15,1;CL:0000359,1.61e-14,32;CL:0002595,1.76e-11,5;CL:0000187,3.06e-11,55;CL:0000192,9.83e-11,43;CL:0000514,9.83e-11,43;CL:0000680,1.24e-10,58;CL:0000056,1.24e-10,58;CL:0000355,1.24e-10,58;CL:0000393,4.42e-10,61;CL:0000211,4.42e-10,61;CL:0000327,1.20e-08,15;CL:0002589,5.74e-08,2;CL:0002583,7.52e-08,2;CL:0002593,9.19e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000514;2.58e-08;43!CL:0000355;3.49e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!8.79e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.96e-23!83;UBERON:0002329!3.96e-23!83;UBERON:0003077!3.96e-23!83;UBERON:0003059!3.96e-23!83;UBERON:0007282!3.96e-23!83;UBERON:0009618!3.96e-23!83;UBERON:0007285!3.96e-23!83;UBERON:0004290!2.04e-19!70;UBERON:0001134!2.89e-15!61;UBERON:0002036!2.89e-15!61;UBERON:0003082!2.89e-15!61;UBERON:0000486!5.90e-15!82;UBERON:0002385!1.72e-14!63;UBERON:0001015!1.72e-14!63;UBERON:0000383!1.72e-14!63;UBERON:0005256!1.65e-11!143;UBERON:0001637!1.18e-10!42;UBERON:0003509!1.18e-10!42;UBERON:0004572!1.18e-10!42;UBERON:0000490!3.42e-10!138;UBERON:0001981!4.80e-10!60;UBERON:0007500!4.80e-10!60;UBERON:0004537!4.80e-10!60;UBERON:0006965!4.80e-10!60;UBERON:0002049!9.50e-10!79;UBERON:0007798!9.50e-10!79;UBERON:0000055!1.24e-09!69;UBERON:0004573!3.70e-09!33;UBERON:0004571!3.70e-09!33;UBERON:0003834!1.48e-08!5;UBERON:0001533!1.48e-08!5;UBERON:0002118!1.87e-08!5;UBERON:0004532!1.87e-08!5;UBERON:0004872!6.31e-08!84;UBERON:0002100!2.50e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003210;1.49e-40;3!UBERON:0007195;1.40e-14;1!UBERON:0003834;1.50e-11;5!UBERON:0001533;1.50e-11;5!UBERON:0001637;3.88e-09;42!UBERON:0003509;3.88e-09;42!UBERON:0004572;3.88e-09;42!UBERON:0003513;1.65e-08;7!UBERON:0004573;2.01e-08;33!UBERON:0004571;2.01e-08;33!UBERON:0001529;6.14e-08;2!UBERON:0002456;6.14e-08;2!UBERON:0007204;6.14e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003210,1.14e-40,3;UBERON:0007195,1.84e-14,1;UBERON:0003834,1.76e-11,5;UBERON:0001533,1.76e-11,5;UBERON:0002329,3.51e-11,71;UBERON:0003059,3.51e-11,71;UBERON:0007282,3.51e-11,71;UBERON:0004290,3.51e-11,71;UBERON:0009618,3.51e-11,71;UBERON:0003077,5.14e-11,72;UBERON:0007285,5.14e-11,72;UBERON:0001637,5.37e-11,42;UBERON:0003509,5.37e-11,42;UBERON:0004572,5.37e-11,42;UBERON:0007524,7.45e-11,73;UBERON:0007503,4.15e-10,78;UBERON:0004573,5.54e-10,33;UBERON:0004571,5.54e-10,33;UBERON:0001134,6.56e-10,62;UBERON:0002036,6.56e-10,62;UBERON:0003082,6.56e-10,62;UBERON:0002385,1.39e-09,64;UBERON:0001015,1.39e-09,64;UBERON:0000383,1.39e-09,64;UBERON:0000486,1.88e-09,83;UBERON:0003513,1.85e-08,7;UBERON:0001529,5.74e-08,2;UBERON:0007204,5.74e-08,2;UBERON:0002456,9.19e-08,2;UBERON:0007500,9.82e-08,59;UBERON:0001981,9.82e-08,59;UBERON:0004537,9.82e-08,59;UBERON:0006965,9.82e-08,59 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0.602694528023977,0.730310090387373,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0.283604451492204,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,0.56530794192401,0,0,0.417989933073621,0.516833518338658,0,0,0.402829317109147,0.760272105718513,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0,0.570471821544449,0.298897361103602,0.117434498643765,0.323745888736263,0.702254033511242,0.204154171254893,0.368502951935304,0.103325781175765,0,0,0,0,0.336672227908132,0.125118519871964,0.554128230968366,0.877955241761676,0,0.150238058906597,0,0.179389635688862,0,0,0.300091096084402,0.206105058476878,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0.433099343283221,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,1.23344192779897,1.30788020649984,3.00686971865895,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0.871533458600294,0,0,0,0,0,0,1.42636905040718,0.289562613335158,0.205476322550383,0.895304816199478,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,1.07946785661859,0.355123450626254,0.657017248110473,0.519254429183621,0,0,0,0,0,0.546273504020151,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.413509717453592,0.107420244868274,0,0.255679882248303,0,0,0,0,0,0,0.62962469366128,1.3940745403212,0,1.06461206063404,0,1.29726953372744,0,0,0,0,0.767693373934002,0,0,0,0.719489830333259,0,0.235624804691373,0,0,0.842516912477962,0,0.243713489631284,1.05650146756755,0,0,0,0.551365343546124,1.32687795048244,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0,0.286822704408103,0,1.07001315444375,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0.685209623233754,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0.979762080328227,1.19730191562487,0,0.851940108927109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0,0.378806010550178,0,0,0,0,0.310874401165561,0,0,0,0.310525913752519,0.414706207840855,0.265841714557995,0.521745061811734,0,0,0.813741466409323,0.727394636810238,0.214821114084977,0.464033759878494,0.796191777397232,2.80019435264208,0.343395705182793,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.591660003652827,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0.602694528023977,0.730310090387373,0,0,0.204000691244253,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0,0.283604451492204,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0.39752481473341,0,0.694281003215189,0.56530794192401,0,0,0.417989933073621,0.516833518338658,0,0,0.402829317109147,0.760272105718513,0,0,0,0.267899184852239,0,0.112611480483322,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0.134710672069688,0.326923806226917,0,0,0,0,0.570471821544449,0.298897361103602,0.117434498643765,0.323745888736263,0.702254033511242,0.204154171254893,0.368502951935304,0.103325781175765,0,0,0,0,0.336672227908132,0.125118519871964,0.554128230968366,0.877955241761676,0,0.150238058906597,0,0.179389635688862,0,0,0.300091096084402,0.206105058476878,0,0.18611685633159,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0,0.117408694235822,0.433099343283221,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,1.23344192779897,1.30788020649984,3.00686971865895,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0.65147236858747,0,0,0,0.871533458600294,0,0,0,0,0,0,1.42636905040718,0.289562613335158,0.205476322550383,0.895304816199478,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.12269149171914,0.500170521059677,0.271265023699736,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,1.07946785661859,0.355123450626254,0.657017248110473,0.519254429183621,0,0,0,0,0,0.546273504020151,0,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.413509717453592,0.107420244868274,0,0.255679882248303,0,0,0,0,0,0,0.62962469366128,1.3940745403212,0,1.06461206063404,0,1.29726953372744,0,0,0,0,0.767693373934002,0,0,0,0.719489830333259,0,0.235624804691373,0,0,0.842516912477962,0,0.243713489631284,1.05650146756755,0,0,0,0.551365343546124,1.32687795048244,0.438450885253763,0,0,0.405820753925408,0.30982349809975,0,0.286822704408103,0,1.07001315444375,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0,0.685209623233754,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.313808538937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0.979762080328227,1.19730191562487,0,0.851940108927109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447764408660622,0.233713309847224,0,0.378806010550178,0,0,0,0,0.310874401165561,0,0,0,0.310525913752519,0.414706207840855,0.265841714557995,0.521745061811734,0,0,0.813741466409323,0.727394636810238,0.214821114084977,0.464033759878494,0.796191777397232,2.80019435264208,0.343395705182793,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0.591660003652827,0.596493833314104,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@MPP4 | |||
}} | }} |
Latest revision as of 13:48, 19 September 2015
Short description: | p7@MPP4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_MPP4_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENST00000396886, uc002uyj.3, uc010zhr.1, uc010zhs.1, uc010zht.1_5end |
EntrezGene: | MPP4 |
HGNC: | 13680 |
UniProt: | E9PG92 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 1.14e-40 | 3 |
multinucleate cell | 6.22e-15 | 1 |
myotube | 6.22e-15 | 1 |
vascular associated smooth muscle cell | 1.61e-14 | 32 |
smooth muscle cell of the subclavian artery | 1.76e-11 | 5 |
muscle cell | 3.06e-11 | 55 |
smooth muscle cell | 9.83e-11 | 43 |
smooth muscle myoblast | 9.83e-11 | 43 |
muscle precursor cell | 1.24e-10 | 58 |
myoblast | 1.24e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.24e-10 | 58 |
electrically responsive cell | 4.42e-10 | 61 |
electrically active cell | 4.42e-10 | 61 |
extracellular matrix secreting cell | 1.20e-08 | 15 |
smooth muscle cell of the brachiocephalic vasculature | 5.74e-08 | 2 |
subcutaneous preadipocyte | 7.52e-08 | 2 |
smooth muscle cell of the internal thoracic artery | 9.19e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood-cerebrospinal fluid barrier | 1.14e-40 | 3 |
stroma of bone marrow | 1.84e-14 | 1 |
thoracic segment blood vessel | 1.76e-11 | 5 |
subclavian artery | 1.76e-11 | 5 |
somite | 3.51e-11 | 71 |
presomitic mesoderm | 3.51e-11 | 71 |
presumptive segmental plate | 3.51e-11 | 71 |
dermomyotome | 3.51e-11 | 71 |
trunk paraxial mesoderm | 3.51e-11 | 71 |
paraxial mesoderm | 5.14e-11 | 72 |
presumptive paraxial mesoderm | 5.14e-11 | 72 |
artery | 5.37e-11 | 42 |
arterial blood vessel | 5.37e-11 | 42 |
arterial system | 5.37e-11 | 42 |
dense mesenchyme tissue | 7.45e-11 | 73 |
epithelial vesicle | 4.15e-10 | 78 |
systemic artery | 5.54e-10 | 33 |
systemic arterial system | 5.54e-10 | 33 |
skeletal muscle tissue | 6.56e-10 | 62 |
striated muscle tissue | 6.56e-10 | 62 |
myotome | 6.56e-10 | 62 |
muscle tissue | 1.39e-09 | 64 |
musculature | 1.39e-09 | 64 |
musculature of body | 1.39e-09 | 64 |
multilaminar epithelium | 1.88e-09 | 83 |
trunk blood vessel | 1.85e-08 | 7 |
brachiocephalic artery | 5.74e-08 | 2 |
brachiocephalic vasculature | 5.74e-08 | 2 |
internal thoracic artery | 9.19e-08 | 2 |
epithelial tube open at both ends | 9.82e-08 | 59 |
blood vessel | 9.82e-08 | 59 |
blood vasculature | 9.82e-08 | 59 |
vascular cord | 9.82e-08 | 59 |