FFCP PHASE1:Hg19::chr11:66139906..66139922,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr11:66139906..66139922,- to FFCP PHASE1:Hg19::chr11:66139906..66139922,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3177 | |EntrezGene=3177 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11004 | |HGNC=11004 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-221bp_to_ENST00000546034_5end | |||
|cluster_id=chr11:66139906..66139922,- | |||
|description=CAGE_peak_7_at_SLC29A2_5end | |||
|id=chr11:66139906..66139922,- | |||
|ontology_enrichment_celltype=CL:0000838!7.14e-15!52;CL:0000542!2.67e-14!53;CL:0000051!2.67e-14!53;CL:0000945!2.48e-08!24;CL:0000826!2.48e-08!24;CL:0002087!1.51e-07!119;CL:0000084!9.96e-07!25;CL:0000827!9.96e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.88e-12;13!CL:0000791;2.64e-08;18!CL:0000789;2.64e-08;18!CL:0002419;2.64e-08;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.40e-11,14;CL:0000838,6.71e-10,52;CL:0000542,1.15e-09,53;CL:0000051,1.15e-09,53;CL:0000791,2.81e-08,18;CL:0000789,2.81e-08,18;CL:0002420,2.81e-08,18;CL:0002419,2.81e-08,18;CL:0000790,2.81e-08,18 | |||
|ontology_enrichment_development_v019=UBERON:0006215;6.63e-15;3!CL:0000790;2.64e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.21e-19!115;UBERON:0001049!8.51e-12!57;UBERON:0005068!8.51e-12!57;UBERON:0006241!8.51e-12!57;UBERON:0007135!8.51e-12!57;UBERON:0002020!1.18e-10!34;UBERON:0003528!1.18e-10!34;UBERON:0001893!2.26e-10!34;UBERON:0002616!2.43e-10!59;UBERON:0002791!6.37e-10!33;UBERON:0001869!1.60e-09!32;UBERON:0002780!3.15e-09!41;UBERON:0001890!3.15e-09!41;UBERON:0006240!3.15e-09!41;UBERON:0002619!7.86e-09!22;UBERON:0003080!8.95e-09!42;UBERON:0000955!1.55e-08!69;UBERON:0006238!1.55e-08!69;UBERON:0001950!5.12e-08!20;UBERON:0000956!7.55e-08!25;UBERON:0000203!7.55e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0004733;2.00e-09;12!UBERON:0002028;2.00e-09;12!UBERON:0004732;1.12e-08;13!UBERON:0002680;1.82e-08;9!UBERON:0001895;1.82e-08;9!UBERON:0002037;1.15e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004733,1.79e-09,12;UBERON:0002028,1.79e-09,12;UBERON:0007277,1.79e-09,12;UBERON:0004732,1.01e-08,13;UBERON:0002680,2.23e-08,9;UBERON:0001895,2.23e-08,9;UBERON:0010092,2.23e-08,9;UBERON:0002037,1.23e-07,6;UBERON:0006215,1.23e-07,6;UBERON:0003076,1.62e-07,15;UBERON:0003057,1.62e-07,15 | |||
|phase1_expression=0,0.642301571672949,0,0,0,0,0,0,0.261185628199839,0.245733936501509,0.697801167972428,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0.458480434487708,0.328402357799783,0.393553906568396,0,0,0,0,0,0.739508020333575,0.154934401160603,0.426507697462265,1.46800219667424,0.553995408531877,0.200544447470142,0,0,0.647787332037959,0.257575567634187,0,0.755751887377619,0,0.232429036905685,0,0,0,0,0,0,0,0,0.188242339542605,0.272906150057846,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0.316462387440884,0.422510572623884,0,0.209658645508376,0,0.150176892841506,0,0,0,0,5.27988733383968,0.546138611262131,0,0.426730222566507,2.00197993518006,0,1.32208974556972,0.954053754535364,1.1384259382189,1.17447437874188,1.52909291250092,0,0,0.263384084775077,1.57367816091066,1.17903228824749,0.411202997999018,0.83593247695339,0.977766799900771,2.36723902867367,5.84480185223734,0.334231370655521,0,0,0.541607727530031,0.384273959177026,0.780356085359269,0.822189523018381,2.48715016007264,2.02862160014537,1.63115219478266,1.60524496853828,1.04535523804977,0.339928028092699,0.383220493601921,1.03088233644789,0.253019692019503,0.95569624297229,0.651083453856419,0,0,1.15187950038977,1.24930726552346,0.947109008176067,0,1.41124720257313,1.06976078313403,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.324547393654683,0,0,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0.36497735907583,0,0,0,0,0,0.473227200159376,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0,0,0.38474715694639,0,0,0,0,1.26755034821831,0,0.590789906681404,2.20731549707325,0.491953754172454,0.171567810298526,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0.858486162094873,0.246217006087397,0,0.297262324577456,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.862510299438069,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0.413536052245775,0.647142602455851,1.17400313583789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0.736647911487171,0,0,0,0.902399225814824,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0,0.509752546090077,0.831076008928724,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0.443430153536676,0,1.52234282769651,0,0,0,0.411362273086194,0.648473311192717,0.540031437238115,1.58625035258854,0.320472213382419,0,0.245040215981032,0,0,0,0.159426272728822,0.399158742865633,0,0.846694330895531,0,0,0.228234679033192,0.313359791546046,0,0,0,0,0.851692475380653,1.03051603426729,0,0.223676107892416,0,0.390776190804081,0,0,0,0,0,0.561421621224659,0.293016358543788,0,0.334330152832435,0,0.47748896947538,0.296964680832639,0,0.994147647766298,0.562677665642051,0,0.16480387422676,0,0.19924798825107,0.552567831062295,0.251932747854276,0.306806047506464,0.369254416383208,0,0.898683511473268,0.537063524026827,0,0,0,0,0,0.185536196323703,0,0,2.53633999988968,0,0.1137934482855,0.254253650292766,0,0.344743373241465,0.874813840149763,0,0.885741385813839,0.241192877250816,4.5774520895125,3.53853631779919,1.18219047581419,0,0.32681539055697,0.139423744278603,0.0769502585037971,0,0,0.269272933229316,0.217294743844016,0.957003479195758,0,0,0,0.156980256395025,0.332423363800313,0.676786981851542,0.588187602953219,1.34257269580674,0,0.635746315921515,0,0.163232808159148,0,0.216388639742091,0,0.265372693510018,0.611030144933625,0.296521128680622,0.123563938946503,0.313265848516366,0.539209063845416,0,0,0.547364367646998,0.391329237864179,0.485560759068186,0.394584402849391,0,0.61214552326098,0,0.300646838828985,0.103688191397247,0,0,0,1.19472429772959,0,0,0,0,0,1.04836000945218,0,0.774050650312681,1.16942907337897,0.739039113478883,0.387956065953678,0,0,0,0,1.2029051231617,0.586654148204409,0.160317640503067,0,0.39961921916426,0.288180834308212,0.229073192331831,0,0,0.124252535565433,0,0,0,0.101998217636322,0,0,0.684526894459965,0,0,0.788662062837943,1.11712960508902,0.687481272035051,0,0.599037001496973,0.858452096273142,0.223171457441873,0.201550417460179,0,0,0,0,0.13480708770837,0.393709926058995,0.592713324460491,1.59045937961861,0.136203406111576,0.321506296930038,0,0.415440338029185,0,0,0.485996453264197,0,0.472834243795189,0.157363764404994,0.211200673038813,0,0.767660789277781,0,1.32418394073086,0,0,0,0,0,0,0,0.113312091520126,0.293104467356165,0,0.904980694530854,0.79339561045614,0.171086837884329,0.704815022316672,0.213574825135389,0,0,1.488498065435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| ||
|short_description=p7@SLC29A2 | |||
}} | }} |
Latest revision as of 14:22, 19 September 2015
Short description: | p7@SLC29A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_SLC29A2_5end |
Coexpression cluster: | NA |
Association with transcript: | -221bp_to_ENST00000546034_5end |
EntrezGene: | SLC29A2 |
HGNC: | 11004 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.40e-11 | 14 |
lymphoid lineage restricted progenitor cell | 6.71e-10 | 52 |
lymphocyte | 1.15e-09 | 53 |
common lymphoid progenitor | 1.15e-09 | 53 |
mature alpha-beta T cell | 2.81e-08 | 18 |
alpha-beta T cell | 2.81e-08 | 18 |
immature T cell | 2.81e-08 | 18 |
mature T cell | 2.81e-08 | 18 |
immature alpha-beta T cell | 2.81e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
segmental subdivision of hindbrain | 1.79e-09 | 12 |
hindbrain | 1.79e-09 | 12 |
presumptive hindbrain | 1.79e-09 | 12 |
segmental subdivision of nervous system | 1.01e-08 | 13 |
regional part of metencephalon | 2.23e-08 | 9 |
metencephalon | 2.23e-08 | 9 |
future metencephalon | 2.23e-08 | 9 |
cerebellum | 1.23e-07 | 6 |
rhombic lip | 1.23e-07 | 6 |
posterior neural tube | 1.62e-07 | 15 |
chordal neural plate | 1.62e-07 | 15 |