FFCP PHASE1:Hg19::chr3:112359190..112359239,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-427bp_to_uc011bhv.1_5end | |association_with_transcript=-427bp_to_uc011bhv.1_5end | ||
|cluster_id=chr3:112359190..112359239,- | |||
|coexpression_cluster_id=C333 | |coexpression_cluster_id=C333 | ||
|description=CAGE_peak_9_at_CCDC80_5end | |description=CAGE_peak_9_at_CCDC80_5end | ||
|id=chr3:112359190..112359239,- | |id=chr3:112359190..112359239,- | ||
|ontology_enrichment_celltype=CL:0000055!7.10e-34!180;CL:0000057!4.49e-22!75;CL:0000680!1.56e-16!57;CL:0000056!1.56e-16!57;CL:0000355!1.56e-16!57;CL:0000187!2.15e-15!54;CL:0000183!1.26e-14!59;CL:0000393!1.12e-12!60;CL:0000211!1.12e-12!60;CL:0000192!6.72e-12!42;CL:0000514!6.72e-12!42;CL:0002620!6.10e-11!23;CL:0000359!9.56e-10!32;CL:0000222!2.35e-09!119;CL:0000136!5.40e-09!15;CL:0002334!3.04e-07!12;CL:0002494!5.46e-07!16 | |ontology_enrichment_celltype=CL:0000055!7.10e-34!180;CL:0000057!4.49e-22!75;CL:0000680!1.56e-16!57;CL:0000056!1.56e-16!57;CL:0000355!1.56e-16!57;CL:0000187!2.15e-15!54;CL:0000183!1.26e-14!59;CL:0000393!1.12e-12!60;CL:0000211!1.12e-12!60;CL:0000192!6.72e-12!42;CL:0000514!6.72e-12!42;CL:0002620!6.10e-11!23;CL:0000359!9.56e-10!32;CL:0000222!2.35e-09!119;CL:0000136!5.40e-09!15;CL:0002334!3.04e-07!12;CL:0002494!5.46e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.10e-12;23!CL:0000134;6.96e-11;55!CL:0000057;2.42e-10;73!CL:0000359;3.13e-10;32!CL:0000187;3.18e-10;55!CL:0000723;6.81e-10;61!CL:0000192;7.79e-10;43!CL:0000048;2.14e-09;58!CL:0000136;3.27e-09;13!CL:0000349;6.31e-09;19!CL:0002320;1.19e-08;188!CL:0002334;2.57e-08;12!CL:0000393;5.80e-08;61!CL:0000211;5.80e-08;61!CL:0002494;7.96e-08;16!CL:0000034;7.57e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.61e-26,76;CL:0000680,2.21e-19,58;CL:0000056,2.21e-19,58;CL:0000355,2.21e-19,58;CL:0000187,4.85e-18,55;CL:0000393,2.47e-14,61;CL:0000211,2.47e-14,61;CL:0000192,1.00e-13,43;CL:0000514,1.00e-13,43;CL:0000048,3.10e-13,427;CL:0000723,1.27e-12,433;CL:0002620,1.38e-12,23;CL:0000222,2.29e-11,121;CL:0000034,2.56e-11,441;CL:0000359,7.14e-11,32;CL:0000136,2.67e-10,15;CL:0000349,9.48e-09,19;CL:0002334,3.03e-08,12;CL:0002494,6.02e-08,16 | |||
|ontology_enrichment_development_v019=CL:0000355;1.29e-10;58!CL:0000514;7.79e-10;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.24e-18!83;UBERON:0002329!2.24e-18!83;UBERON:0003077!2.24e-18!83;UBERON:0003059!2.24e-18!83;UBERON:0007282!2.24e-18!83;UBERON:0009618!2.24e-18!83;UBERON:0007285!2.24e-18!83;UBERON:0004290!4.05e-17!70;UBERON:0000486!1.62e-16!82;UBERON:0002385!5.57e-16!63;UBERON:0001015!5.57e-16!63;UBERON:0000383!5.57e-16!63;UBERON:0001134!5.78e-16!61;UBERON:0002036!5.78e-16!61;UBERON:0003082!5.78e-16!61;UBERON:0000475!1.18e-14!365;UBERON:0005256!1.29e-13!143;UBERON:0002100!1.91e-10!216;UBERON:0000119!3.00e-10!312;UBERON:0002199!3.18e-10!45;UBERON:0002416!3.18e-10!45;UBERON:0004872!6.17e-10!84;UBERON:0004923!6.65e-10!57;UBERON:0000481!1.45e-09!347;UBERON:0000483!1.98e-09!309;UBERON:0003102!2.62e-09!95;UBERON:0002097!1.85e-08!40;UBERON:0001013!4.91e-08!14;UBERON:0000948!4.98e-08!24;UBERON:0005498!4.98e-08!24;UBERON:0004140!4.98e-08!24;UBERON:0009881!4.98e-08!24;UBERON:0004141!4.98e-08!24;UBERON:0003084!4.98e-08!24;UBERON:0007005!4.98e-08!24;UBERON:0004139!4.98e-08!24;UBERON:0004291!4.98e-08!24;UBERON:0007100!6.73e-08!27;UBERON:0003104!1.59e-07!238;UBERON:0009142!1.59e-07!238;UBERON:0000468!1.63e-07!659;UBERON:0000490!2.49e-07!138;UBERON:0001637!3.71e-07!42;UBERON:0003509!3.71e-07!42;UBERON:0004572!3.71e-07!42;UBERON:0004573!4.42e-07!33;UBERON:0004571!4.42e-07!33;UBERON:0002049!9.40e-07!79;UBERON:0007798!9.40e-07!79 | |ontology_enrichment_uberon=UBERON:0000914!2.24e-18!83;UBERON:0002329!2.24e-18!83;UBERON:0003077!2.24e-18!83;UBERON:0003059!2.24e-18!83;UBERON:0007282!2.24e-18!83;UBERON:0009618!2.24e-18!83;UBERON:0007285!2.24e-18!83;UBERON:0004290!4.05e-17!70;UBERON:0000486!1.62e-16!82;UBERON:0002385!5.57e-16!63;UBERON:0001015!5.57e-16!63;UBERON:0000383!5.57e-16!63;UBERON:0001134!5.78e-16!61;UBERON:0002036!5.78e-16!61;UBERON:0003082!5.78e-16!61;UBERON:0000475!1.18e-14!365;UBERON:0005256!1.29e-13!143;UBERON:0002100!1.91e-10!216;UBERON:0000119!3.00e-10!312;UBERON:0002199!3.18e-10!45;UBERON:0002416!3.18e-10!45;UBERON:0004872!6.17e-10!84;UBERON:0004923!6.65e-10!57;UBERON:0000481!1.45e-09!347;UBERON:0000483!1.98e-09!309;UBERON:0003102!2.62e-09!95;UBERON:0002097!1.85e-08!40;UBERON:0001013!4.91e-08!14;UBERON:0000948!4.98e-08!24;UBERON:0005498!4.98e-08!24;UBERON:0004140!4.98e-08!24;UBERON:0009881!4.98e-08!24;UBERON:0004141!4.98e-08!24;UBERON:0003084!4.98e-08!24;UBERON:0007005!4.98e-08!24;UBERON:0004139!4.98e-08!24;UBERON:0004291!4.98e-08!24;UBERON:0007100!6.73e-08!27;UBERON:0003104!1.59e-07!238;UBERON:0009142!1.59e-07!238;UBERON:0000468!1.63e-07!659;UBERON:0000490!2.49e-07!138;UBERON:0001637!3.71e-07!42;UBERON:0003509!3.71e-07!42;UBERON:0004572!3.71e-07!42;UBERON:0004573!4.42e-07!33;UBERON:0004571!4.42e-07!33;UBERON:0002049!9.40e-07!79;UBERON:0007798!9.40e-07!79 | ||
|ontology_enrichment_uberon_v019=UBERON:0001013;3.73e-09;14!UBERON:0002384;5.72e-09;198!UBERON:0000948;4.61e-08;22!UBERON:0002199;1.55e-07;46!UBERON:0002416;1.55e-07;46!UBERON:0007100;2.21e-07;25!UBERON:0002385;2.72e-07;31!UBERON:0001015;2.72e-07;31!UBERON:0000383;2.72e-07;31!UBERON:0004573;5.40e-07;33!UBERON:0004571;5.40e-07;33!UBERON:0002097;7.03e-07;41 | |||
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|phase1_expression=11.2640595147745,14.9870366723688,16.4916652792286,14.0102617694383,24.5828601935008,21.8084631025092,2.53299878168311,9.47579810140246,11.2309820125931,2.7030733015166,0.697801167972428,13.3249236999405,10.5506791291381,6.68338305984252,3.64537113300707,2.6893005858071,3.61616716814386,2.19093027116212,1.46379839637152,4.80172126499473,5.91602004608334,2.19418305034661,0.85870796139317,0.821246550437305,1.50651167513763,0,0,0,0,0,0.154816123316076,1.83884244895785,0.30120591877825,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.5045493051169,14.0847180537764,9.46182957642124,3.61439152384566,11.5307719446255,10.718642403101,2.3858578411533,3.89307896242109,2.26883561193763,5.32150553910154,3.33772185633879,0.916853528483988,0.728590576585084,1.48313777113772,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,1.70843440283719,0.367663080345869,2.43042584364528,0,0,0,0,0,0.183201743930407,0,0,0.872188104285069,21.866765874594,18.4880547030286,19.7289679411696,87.4851693283882,13.4773985235376,11.2135520028461,3.20246987189115,7.89336154934912,12.7596524513904,2.96363478553314,1.47115712802113,10.7463773627901,6.33793516927999,1.40592859100278,3.74592092196385,1.1409436430889,4.93180645820944,4.69737994575059,3.56120477609889,2.38766371393822,2.44985005505872,0.61417158655884,3.30642499762449,0,1.97813543422845,8.19145225744224,2.87447256726495,2.18836948140286,2.37725187756732,4.15596173226274,4.82875382968922,5.21029252858333,3.75595147266492,4.76415169272088,21.5267562826634,18.3659354383968,21.1931901159562,50.4153041421796,18.1372451459652,22.6723675240154,13.5865305122061,28.523200148774,13.4463067122454,23.9812085531909,13.9915845936295,13.2549766591426,36.5659880292113,8.16091995643886,6.44330250779853,0.193260853163297,0.272746120590835,0.286804595389004,0.365921118388786,0,0.580969714347592,0.621966330092223,0,0,9.38697193978896,6.43240938192885,0,17.1816133371832,13.7157101517221,0.118306800039844,0.337169380156203,0.482022059766964,0.110293972732394,0,0,0.269662616320329,0.784885860501384,0,0,0,6.173610169971,8.82052268313252,0,0,0.590789906681404,0,0.122988438543114,2.23038153388083,0.878002283269004,0,0.402115889646523,4.81459914824354,0.325808305310325,0,5.77325368101093,0.463721619900307,6.69229557144183,1.44366447761074,1.85194205030644,1.33177906564219,0,0,0,0,0,0.93733833986777,0.839910640994298,0.283550194484773,1.61205340865127,0.871901815541886,0.383382679165211,0,0,0,0,0,0.126995788584338,0.381988425558278,0,0,0.411309970813294,0.600686115687835,0.857479297891735,9.75540433804638,13.950722202665,8.43390286940925,8.27338980849778,25.0359512096318,6.762422020448,2.6593811658487,1.04007436911366,5.65856223376713,1.41849132023278,3.19706614819319,8.86463560680515,9.22456729165453,14.8183260620538,8.46914079163711,7.46323092359346,12.6712299669349,5.72734816413214,4.35766729300147,5.69846049737725,0,0,0,5.99062138728957,8.04033550838797,0,11.2929419200712,6.36976599906189,4.47652408099739,0,0,0,0,0.76228387266739,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,12.0237661884757,10.0034104211935,6.23909554509392,6.65506756898583,6.24501460790066,4.73107245101804,7.37990914454093,8.42649079237613,4.5481500811197,7.24311499047534,5.31380478828349,3.87175253937577,3.5622281931914,3.13281851940385,1.02943027143257,0,0,0,3.03127571446259,23.3009615314696,12.0956117331872,14.1421450456703,11.5096479966047,12.6297042494883,22.9369077167705,4.09365799253363,15.6028303509299,13.3576259800492,6.9394362211195,8.16783936440384,9.033987161519,4.67328986265259,6.2753604368378,0.362578348774867,0.601519410909855,1.74953878978203,4.93702127107809,4.00600569614778,7.6052160676466,0.451199612907412,3.00359814707218,2.35304930753057,0,0.73886140225013,0,0,1.0795795805107,4.62681758070868,0.812839312631559,1.50506932156456,0.764628819135115,0,0.895499018888713,0,0,2.05160100093111,3.28014645699706,0.650756789328606,0.103041011647722,0.732555718546747,0.577566499444116,2.29706215198469,1.30012049207304,12.8547143875328,1.64340221096607,4.62145851343933,6.90766536267583,8.27019434907183,17.2946594237921,11.7463522070525,4.51701125305335,3.56128142586949,0.661139661443912,0,3.31793052485919,0.809262246844399,1.39453664789186,84.3697089506115,9.7585217822484,5.5446044431696,5.85536633348724,3.47973196830029,9.63685939340384,4.15062171551775,6.69885064847401,5.69482964493707,6.67205678733387,2.81487570442467,4.70732886837312,6.68226820644467,3.92474320099615,7.91438813366585,6.58888871366531,3.76999687506197,7.27856933663938,1.58510321173008,2.94880919367287,5.85160486907508,7.06769119930725,8.45201174054043,6.00599610195137,5.79762271010222,4.52032466480971,2.2054613741845,7.96126770289464,5.69986150829892,1.73632660280006,1.31178950409327,7.10186319369464,0.30982349809975,4.50712964051586,9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| ||
|short_description=p9@CCDC80 | |short_description=p9@CCDC80 | ||
}} | }} |
Latest revision as of 14:24, 19 September 2015
Short description: | p9@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | -427bp_to_uc011bhv.1_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.61e-26 | 76 |
muscle precursor cell | 2.21e-19 | 58 |
myoblast | 2.21e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.21e-19 | 58 |
muscle cell | 4.85e-18 | 55 |
electrically responsive cell | 2.47e-14 | 61 |
electrically active cell | 2.47e-14 | 61 |
smooth muscle cell | 1.00e-13 | 43 |
smooth muscle myoblast | 1.00e-13 | 43 |
multi fate stem cell | 3.10e-13 | 427 |
somatic stem cell | 1.27e-12 | 433 |
skin fibroblast | 1.38e-12 | 23 |
mesodermal cell | 2.29e-11 | 121 |
stem cell | 2.56e-11 | 441 |
vascular associated smooth muscle cell | 7.14e-11 | 32 |
fat cell | 2.67e-10 | 15 |
extraembryonic cell | 9.48e-09 | 19 |
preadipocyte | 3.03e-08 | 12 |
cardiocyte | 6.02e-08 | 16 |