FFCP PHASE1:Hg19::chr3:112359190..112359239,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151887 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=30649 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-427bp_to_uc011bhv.1_5end | |||
|cluster_id=chr3:112359190..112359239,- | |||
|coexpression_cluster_id=C333 | |||
|description=CAGE_peak_9_at_CCDC80_5end | |||
|id=chr3:112359190..112359239,- | |||
|ontology_enrichment_celltype=CL:0000055!7.10e-34!180;CL:0000057!4.49e-22!75;CL:0000680!1.56e-16!57;CL:0000056!1.56e-16!57;CL:0000355!1.56e-16!57;CL:0000187!2.15e-15!54;CL:0000183!1.26e-14!59;CL:0000393!1.12e-12!60;CL:0000211!1.12e-12!60;CL:0000192!6.72e-12!42;CL:0000514!6.72e-12!42;CL:0002620!6.10e-11!23;CL:0000359!9.56e-10!32;CL:0000222!2.35e-09!119;CL:0000136!5.40e-09!15;CL:0002334!3.04e-07!12;CL:0002494!5.46e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.10e-12;23!CL:0000134;6.96e-11;55!CL:0000057;2.42e-10;73!CL:0000359;3.13e-10;32!CL:0000187;3.18e-10;55!CL:0000723;6.81e-10;61!CL:0000192;7.79e-10;43!CL:0000048;2.14e-09;58!CL:0000136;3.27e-09;13!CL:0000349;6.31e-09;19!CL:0002320;1.19e-08;188!CL:0002334;2.57e-08;12!CL:0000393;5.80e-08;61!CL:0000211;5.80e-08;61!CL:0002494;7.96e-08;16!CL:0000034;7.57e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.61e-26,76;CL:0000680,2.21e-19,58;CL:0000056,2.21e-19,58;CL:0000355,2.21e-19,58;CL:0000187,4.85e-18,55;CL:0000393,2.47e-14,61;CL:0000211,2.47e-14,61;CL:0000192,1.00e-13,43;CL:0000514,1.00e-13,43;CL:0000048,3.10e-13,427;CL:0000723,1.27e-12,433;CL:0002620,1.38e-12,23;CL:0000222,2.29e-11,121;CL:0000034,2.56e-11,441;CL:0000359,7.14e-11,32;CL:0000136,2.67e-10,15;CL:0000349,9.48e-09,19;CL:0002334,3.03e-08,12;CL:0002494,6.02e-08,16 | |||
|ontology_enrichment_development_v019=CL:0000355;1.29e-10;58!CL:0000514;7.79e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.24e-18!83;UBERON:0002329!2.24e-18!83;UBERON:0003077!2.24e-18!83;UBERON:0003059!2.24e-18!83;UBERON:0007282!2.24e-18!83;UBERON:0009618!2.24e-18!83;UBERON:0007285!2.24e-18!83;UBERON:0004290!4.05e-17!70;UBERON:0000486!1.62e-16!82;UBERON:0002385!5.57e-16!63;UBERON:0001015!5.57e-16!63;UBERON:0000383!5.57e-16!63;UBERON:0001134!5.78e-16!61;UBERON:0002036!5.78e-16!61;UBERON:0003082!5.78e-16!61;UBERON:0000475!1.18e-14!365;UBERON:0005256!1.29e-13!143;UBERON:0002100!1.91e-10!216;UBERON:0000119!3.00e-10!312;UBERON:0002199!3.18e-10!45;UBERON:0002416!3.18e-10!45;UBERON:0004872!6.17e-10!84;UBERON:0004923!6.65e-10!57;UBERON:0000481!1.45e-09!347;UBERON:0000483!1.98e-09!309;UBERON:0003102!2.62e-09!95;UBERON:0002097!1.85e-08!40;UBERON:0001013!4.91e-08!14;UBERON:0000948!4.98e-08!24;UBERON:0005498!4.98e-08!24;UBERON:0004140!4.98e-08!24;UBERON:0009881!4.98e-08!24;UBERON:0004141!4.98e-08!24;UBERON:0003084!4.98e-08!24;UBERON:0007005!4.98e-08!24;UBERON:0004139!4.98e-08!24;UBERON:0004291!4.98e-08!24;UBERON:0007100!6.73e-08!27;UBERON:0003104!1.59e-07!238;UBERON:0009142!1.59e-07!238;UBERON:0000468!1.63e-07!659;UBERON:0000490!2.49e-07!138;UBERON:0001637!3.71e-07!42;UBERON:0003509!3.71e-07!42;UBERON:0004572!3.71e-07!42;UBERON:0004573!4.42e-07!33;UBERON:0004571!4.42e-07!33;UBERON:0002049!9.40e-07!79;UBERON:0007798!9.40e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;3.73e-09;14!UBERON:0002384;5.72e-09;198!UBERON:0000948;4.61e-08;22!UBERON:0002199;1.55e-07;46!UBERON:0002416;1.55e-07;46!UBERON:0007100;2.21e-07;25!UBERON:0002385;2.72e-07;31!UBERON:0001015;2.72e-07;31!UBERON:0000383;2.72e-07;31!UBERON:0004573;5.40e-07;33!UBERON:0004571;5.40e-07;33!UBERON:0002097;7.03e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002329,5.84e-20,71;UBERON:0003059,5.84e-20,71;UBERON:0007282,5.84e-20,71;UBERON:0004290,5.84e-20,71;UBERON:0009618,5.84e-20,71;UBERON:0007524,1.43e-19,73;UBERON:0003077,2.43e-19,72;UBERON:0007285,2.43e-19,72;UBERON:0000486,1.56e-18,83;UBERON:0001134,2.14e-18,62;UBERON:0002036,2.14e-18,62;UBERON:0003082,2.14e-18,62;UBERON:0002385,5.22e-18,64;UBERON:0001015,5.22e-18,64;UBERON:0000383,5.22e-18,64;UBERON:0007503,6.25e-18,78;UBERON:0005256,6.77e-14,122;UBERON:0003104,2.44e-13,160;UBERON:0009142,2.44e-13,160;UBERON:0002199,6.22e-11,46;UBERON:0002416,6.22e-11,46;UBERON:0004872,1.38e-10,83;UBERON:0001013,3.57e-09,14;UBERON:0000490,3.62e-09,148;UBERON:0002097,6.46e-09,41;UBERON:0000948,9.95e-09,24;UBERON:0005498,9.95e-09,24;UBERON:0004140,9.95e-09,24;UBERON:0009881,9.95e-09,24;UBERON:0004141,9.95e-09,24;UBERON:0003084,9.95e-09,24;UBERON:0007005,9.95e-09,24;UBERON:0004139,9.95e-09,24;UBERON:0004291,9.95e-09,24;UBERON:0000926,1.45e-08,315;UBERON:0004120,1.45e-08,315;UBERON:0006603,1.45e-08,315;UBERON:0007100,4.58e-08,27;UBERON:0004573,7.88e-08,33;UBERON:0004571,7.88e-08,33;UBERON:0002100,9.57e-08,199;UBERON:0002049,1.01e-07,78;UBERON:0007798,1.01e-07,78;UBERON:0004535,1.18e-07,109;UBERON:0001009,1.45e-07,112;UBERON:0001637,1.72e-07,42;UBERON:0003509,1.72e-07,42;UBERON:0004572,1.72e-07,42;UBERON:0004923,1.93e-07,66;UBERON:0003102,7.51e-07,99 | |||
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| |||
|short_description=p9@CCDC80 | |||
}} |
Latest revision as of 14:24, 19 September 2015
Short description: | p9@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | -427bp_to_uc011bhv.1_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.61e-26 | 76 |
muscle precursor cell | 2.21e-19 | 58 |
myoblast | 2.21e-19 | 58 |
multi-potent skeletal muscle stem cell | 2.21e-19 | 58 |
muscle cell | 4.85e-18 | 55 |
electrically responsive cell | 2.47e-14 | 61 |
electrically active cell | 2.47e-14 | 61 |
smooth muscle cell | 1.00e-13 | 43 |
smooth muscle myoblast | 1.00e-13 | 43 |
multi fate stem cell | 3.10e-13 | 427 |
somatic stem cell | 1.27e-12 | 433 |
skin fibroblast | 1.38e-12 | 23 |
mesodermal cell | 2.29e-11 | 121 |
stem cell | 2.56e-11 | 441 |
vascular associated smooth muscle cell | 7.14e-11 | 32 |
fat cell | 2.67e-10 | 15 |
extraembryonic cell | 9.48e-09 | 19 |
preadipocyte | 3.03e-08 | 12 |
cardiocyte | 6.02e-08 | 16 |