FFCP PHASE1:Hg19::chr3:112359244..112359263,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151887 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=30649 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-481bp_to_uc011bhv.1_5end | |||
|cluster_id=chr3:112359244..112359263,- | |||
|coexpression_cluster_id=C720 | |||
|description=CAGE_peak_11_at_CCDC80_5end | |||
|id=chr3:112359244..112359263,- | |||
|ontology_enrichment_celltype=CL:0000055!3.18e-36!180;CL:0000057!4.04e-23!75;CL:0000680!1.05e-18!57;CL:0000056!1.05e-18!57;CL:0000355!1.05e-18!57;CL:0000187!1.87e-17!54;CL:0000183!3.14e-16!59;CL:0000192!1.05e-14!42;CL:0000514!1.05e-14!42;CL:0000393!1.95e-13!60;CL:0000211!1.95e-13!60;CL:0000359!9.67e-13!32;CL:0002620!6.22e-11!23;CL:0000222!9.73e-10!119;CL:0002334!4.25e-09!12;CL:0002494!1.70e-08!16;CL:0000136!5.64e-08!15;CL:0000048!4.02e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.93e-13;32!CL:0000192;1.34e-11;43!CL:0000134;1.49e-11;55!CL:0000048;6.05e-11;58!CL:0002334;6.16e-11;12!CL:0000187;8.78e-11;55!CL:0000723;1.41e-10;61!CL:0000393;2.09e-09;61!CL:0000211;2.09e-09;61!CL:0002620;2.10e-09;23!CL:0002494;2.43e-09;16!CL:0000057;4.63e-09;73!CL:0002320;1.35e-08;188!CL:0000136;5.59e-08;13!CL:0000034;1.10e-07;69!CL:0000327;3.96e-07;15!CL:0002570;6.31e-07;8!CL:0000499;7.17e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.99e-23,76;CL:0000680,1.41e-21,58;CL:0000056,1.41e-21,58;CL:0000355,1.41e-21,58;CL:0000187,4.92e-20,55;CL:0000048,1.68e-18,427;CL:0000723,1.94e-17,433;CL:0000192,2.33e-16,43;CL:0000514,2.33e-16,43;CL:0000393,2.48e-16,61;CL:0000211,2.48e-16,61;CL:0000034,4.39e-16,441;CL:0000359,3.95e-14,32;CL:0002334,5.96e-11,12;CL:0000222,9.01e-11,121;CL:0000136,1.49e-09,15;CL:0002620,1.76e-09,23;CL:0002494,2.46e-09,16;CL:0002320,1.74e-07,361;CL:0000327,2.96e-07,15;CL:0000499,5.21e-07,28;CL:0002570,6.78e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000355;1.20e-11;58!CL:0000514;1.34e-11;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;9.20e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,8.33e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.62e-19!83;UBERON:0002329!6.62e-19!83;UBERON:0003077!6.62e-19!83;UBERON:0003059!6.62e-19!83;UBERON:0007282!6.62e-19!83;UBERON:0009618!6.62e-19!83;UBERON:0007285!6.62e-19!83;UBERON:0004290!7.40e-19!70;UBERON:0001134!4.77e-18!61;UBERON:0002036!4.77e-18!61;UBERON:0003082!4.77e-18!61;UBERON:0002385!5.75e-18!63;UBERON:0001015!5.75e-18!63;UBERON:0000383!5.75e-18!63;UBERON:0000486!1.06e-16!82;UBERON:0004872!3.60e-13!84;UBERON:0000475!9.81e-11!365;UBERON:0000948!8.39e-10!24;UBERON:0005498!8.39e-10!24;UBERON:0004140!8.39e-10!24;UBERON:0009881!8.39e-10!24;UBERON:0004141!8.39e-10!24;UBERON:0003084!8.39e-10!24;UBERON:0007005!8.39e-10!24;UBERON:0004139!8.39e-10!24;UBERON:0004291!8.39e-10!24;UBERON:0007100!1.48e-09!27;UBERON:0005256!1.52e-09!143;UBERON:0001637!2.31e-09!42;UBERON:0003509!2.31e-09!42;UBERON:0004572!2.31e-09!42;UBERON:0004573!6.52e-09!33;UBERON:0004571!6.52e-09!33;UBERON:0002199!8.08e-09!45;UBERON:0002416!8.08e-09!45;UBERON:0004923!2.23e-08!57;UBERON:0002049!2.43e-08!79;UBERON:0007798!2.43e-08!79;UBERON:0001009!3.20e-08!113;UBERON:0001013!3.97e-08!14;UBERON:0004535!4.55e-08!110;UBERON:0000119!8.47e-08!312;UBERON:0002097!3.90e-07!40;UBERON:0000483!4.13e-07!309;UBERON:0001981!5.83e-07!60;UBERON:0007500!5.83e-07!60;UBERON:0004537!5.83e-07!60;UBERON:0006965!5.83e-07!60;UBERON:0003102!6.69e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;1.04e-09;14!UBERON:0002384;7.02e-09;198!UBERON:0000948;4.80e-08;22!UBERON:0004573;1.41e-07;33!UBERON:0004571;1.41e-07;33!UBERON:0001637;4.42e-07;42!UBERON:0003509;4.42e-07;42!UBERON:0004572;4.42e-07;42!UBERON:0007100;4.87e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.35e-20,62;UBERON:0002036,1.35e-20,62;UBERON:0003082,1.35e-20,62;UBERON:0002385,3.89e-20,64;UBERON:0001015,3.89e-20,64;UBERON:0000383,3.89e-20,64;UBERON:0002329,6.45e-20,71;UBERON:0003059,6.45e-20,71;UBERON:0007282,6.45e-20,71;UBERON:0004290,6.45e-20,71;UBERON:0009618,6.45e-20,71;UBERON:0007524,6.59e-20,73;UBERON:0003077,2.36e-19,72;UBERON:0007285,2.36e-19,72;UBERON:0000486,5.56e-17,83;UBERON:0007503,6.59e-17,78;UBERON:0005256,2.71e-12,122;UBERON:0004872,6.42e-12,83;UBERON:0003104,3.99e-11,160;UBERON:0009142,3.99e-11,160;UBERON:0000926,1.12e-10,315;UBERON:0004120,1.12e-10,315;UBERON:0006603,1.12e-10,315;UBERON:0001637,7.14e-10,42;UBERON:0003509,7.14e-10,42;UBERON:0004572,7.14e-10,42;UBERON:0001013,9.61e-10,14;UBERON:0002199,3.95e-09,46;UBERON:0002416,3.95e-09,46;UBERON:0000948,4.48e-09,24;UBERON:0005498,4.48e-09,24;UBERON:0004140,4.48e-09,24;UBERON:0009881,4.48e-09,24;UBERON:0004141,4.48e-09,24;UBERON:0003084,4.48e-09,24;UBERON:0007005,4.48e-09,24;UBERON:0004139,4.48e-09,24;UBERON:0004291,4.48e-09,24;UBERON:0004573,1.07e-08,33;UBERON:0004571,1.07e-08,33;UBERON:0004535,2.51e-08,109;UBERON:0002384,4.08e-08,371;UBERON:0001009,5.07e-08,112;UBERON:0007100,5.57e-08,27;UBERON:0000490,1.13e-07,148;UBERON:0002049,1.31e-07,78;UBERON:0007798,1.31e-07,78;UBERON:0002097,3.67e-07,41 | |||
|phase1_expression=11.8090946525862,13.7024335290229,17.3373917038045,6.00439790118782,8.49226079411847,9.59572376510406,2.53299878168311,3.79031924056099,4.70134130759709,0.245733936501509,0,14.1986891884612,8.17677632508206,5.321953177282,2.31978163009541,1.34465029290355,0.602694528023977,2.92124036154949,1.95173119516203,4.062994916534,3.26401105990805,0.626909442956176,0.85870796139317,1.36874425072884,1.25542639594803,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.6284119788377,4.02420515822182,9.20610445273418,3.61439152384566,11.5307719446255,8.11140506180613,3.1811437882044,10.2193322763554,1.03988298880475,3.99112915432615,2.63504357079378,0.785874452986276,0,0,0,0,0,0,0,0,0.198762407366705,0,0.694281003215189,0.56530794192401,0,0,0,0,0,0,0,0,0.732186172644509,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,17.3940183093361,20.0076208430036,19.1993312179167,63.3908931854878,13.8320669057359,14.0169400035577,5.33744978648525,6.66002380726332,11.8260193451911,1.48181739276657,0.817309515567294,7.11379909931178,7.49028701823999,0.937285727335186,0.936480230490962,0.570471821544449,1.94283284717341,1.52664848236894,1.45685649931318,0.98315564691574,1.63323337003915,0.122834317311768,1.85986406116378,0,2.96720315134268,0.910161361938026,0,0.168336113954066,0.375355559615893,1.10825646193673,5.26773145057006,6.12975591598039,3.45547535485173,3.97012641060074,21.3473666469746,20.5015093265825,17.3784158950841,42.0127534518163,18.6525077921574,19.3230405034222,10.9808945235638,45.4008333729006,13.3488697070842,20.1947019395292,20.3430275999482,7.43571861366535,25.2056810686796,10.1759619209917,6.95198428472999,0.193260853163297,0.272746120590835,0.286804595389004,0,0,0,0,0,0,6.25798129319264,9.64861407289328,0,8.35862270457562,7.21879481669586,0,0,0,0,0,0,0,0,0,0,0,2.8810180793198,2.94017422771084,0,0,0,0,0,1.3725424823882,0,0,0,0.0925884451585296,0,1.03993478527958,0,0.579652024875384,5.75302601755526,1.15493158208859,0.925971025153221,1.14152491340759,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0.126995788584338,0,0,0,0.308482478109971,0,0.285826432630578,8.63409349459278,5.66748089483264,8.2138880119464,6.07577064061555,7.15312891703765,5.071816515336,1.59562869950922,4.16029747645464,5.91576960802927,1.41849132023278,2.39779961114489,2.57360388584666,3.25572963234866,1.64648067356154,4.56030658011229,3.19852753868291,2.37585561880029,3.31583314765545,1.74306691720059,4.29883862082845,0,0,0,4.0736225433569,8.04033550838797,0,8.39731578671959,3.49309748335652,5.01370697071708,0,0,0,0,1.77866236955724,0,0,0,0,0,0,0,8.09763845346323,4.50153468953709,4.06897535549603,5.19927153827018,5.53129865271201,3.15404830067869,8.08275763449721,5.71797589482666,0,4.1389228517002,12.6202863721733,5.7154442247928,2.69339204851057,1.37060810223918,3.0882908142977,0,0,0,2.42502057157008,11.6504807657348,12.0956117331872,16.1270075082205,18.2619748212794,14.5943249105198,27.1654996422086,15.3512174720011,22.8412568023923,17.8101679733989,9.25258162815933,7.28003073783821,7.96633413333949,8.30807086693794,6.2753604368378,0,0,0,4.82220682291348,3.27764102412091,4.45823010862042,0.451199612907412,0.15403067420883,0,0,0,0,0,1.0795795805107,0,0.270946437543853,0,0.254876273045038,0,0,0,0,0,2.29610251989794,0.325378394664303,0.412164046590889,0.824125183365091,0.742585499285292,1.14853107599234,0.650060246036521,8.03419649220798,1.93341436584244,2.46477787383431,2.76306614507033,2.06754858726796,4.40423003959922,5.65565106265491,1.44885266607372,4.36256974669013,0,0,0,0.10115778085555,0.464845549297286,52.2588495738863,6.970372701606,7.70083950440222,6.38767236380426,6.95946393660058,16.308531281145,2.86249773483982,2.97726695487734,5.69482964493707,5.14701523594327,0.767693373934002,4.2793898803392,7.95508119814842,2.35484592059769,4.13706652441624,2.74537029736055,1.41374882814824,7.68293429978601,4.75530963519025,2.52755073743389,1.95053495635836,9.01739911635752,6.33900880540533,4.91399681068749,5.5148118461948,10.1707304958219,2.75682671773062,4.64407282668854,3.5076070820301,1.15755106853338,3.27947376023316,5.47858017799301,3.40805847909725,4.7888252430481,4.7325746227337,7.07393095294472,6.77674997814376,1.41904425628239,11.1887046707762,9.87884678879706,0.75894634753143,1.74967360122491,0,0,0,0.470719003883896,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.22317994398167,0,0,0.284136146806413,4.05865624054073,6.23625829748541,3.07160702099232,0,0.281338832821026,4.89758302100786,0,0,1.79323189425963,0.276283915531148,0,0,0,18.3513356720466,0,0,0,1.7755813014648,0,6.66821940867821,0,0.463840490809256,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.361789315876224,3.05163472634166,1.87984741883082,0.591095237907095,0.658156191461918,0.10893846351899,0.139423744278603,3.3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| |||
|short_description=p11@CCDC80 | |||
}} |
Latest revision as of 14:25, 19 September 2015
Short description: | p11@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CCDC80_5end |
Coexpression cluster: | C720_Smooth_Fibroblast_Preadipocyte_Sertoli_Ewing_hepatic_Synoviocyte |
Association with transcript: | -481bp_to_uc011bhv.1_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.99e-23 | 76 |
muscle precursor cell | 1.41e-21 | 58 |
myoblast | 1.41e-21 | 58 |
multi-potent skeletal muscle stem cell | 1.41e-21 | 58 |
muscle cell | 4.92e-20 | 55 |
multi fate stem cell | 1.68e-18 | 427 |
somatic stem cell | 1.94e-17 | 433 |
smooth muscle cell | 2.33e-16 | 43 |
smooth muscle myoblast | 2.33e-16 | 43 |
electrically responsive cell | 2.48e-16 | 61 |
electrically active cell | 2.48e-16 | 61 |
stem cell | 4.39e-16 | 441 |
vascular associated smooth muscle cell | 3.95e-14 | 32 |
preadipocyte | 5.96e-11 | 12 |
mesodermal cell | 9.01e-11 | 121 |
fat cell | 1.49e-09 | 15 |
skin fibroblast | 1.76e-09 | 23 |
cardiocyte | 2.46e-09 | 16 |
connective tissue cell | 1.74e-07 | 361 |
extracellular matrix secreting cell | 2.96e-07 | 15 |
stromal cell | 5.21e-07 | 28 |
mesenchymal stem cell of adipose | 6.78e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 8.33e-07 | 14 |