FFCP PHASE1:Hg19::chr3:112359529..112359540,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=151887 | |EntrezGene=151887 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30649 | |HGNC=30649 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=362bp_to_ENST00000475181_5end | |association_with_transcript=362bp_to_ENST00000475181_5end | ||
|cluster_id=chr3:112359529..112359540,- | |||
|coexpression_cluster_id=C333 | |coexpression_cluster_id=C333 | ||
|description=CAGE_peak_23_at_CCDC80_5end | |description=CAGE_peak_23_at_CCDC80_5end | ||
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|ontology_enrichment_celltype=CL:0000055!4.98e-23!180;CL:0000057!1.15e-15!75;CL:0000680!6.40e-11!57;CL:0000056!6.40e-11!57;CL:0000355!6.40e-11!57;CL:0000187!1.28e-09!54;CL:0000136!1.83e-08!15;CL:0000222!2.25e-08!119;CL:0000183!3.44e-08!59;CL:0002620!4.55e-08!23;CL:0000393!2.17e-07!60;CL:0000211!2.17e-07!60;CL:0002494!2.69e-07!16;CL:0002334!4.24e-07!12;CL:0000192!6.21e-07!42;CL:0000514!6.21e-07!42 | |ontology_enrichment_celltype=CL:0000055!4.98e-23!180;CL:0000057!1.15e-15!75;CL:0000680!6.40e-11!57;CL:0000056!6.40e-11!57;CL:0000355!6.40e-11!57;CL:0000187!1.28e-09!54;CL:0000136!1.83e-08!15;CL:0000222!2.25e-08!119;CL:0000183!3.44e-08!59;CL:0002620!4.55e-08!23;CL:0000393!2.17e-07!60;CL:0000211!2.17e-07!60;CL:0002494!2.69e-07!16;CL:0002334!4.24e-07!12;CL:0000192!6.21e-07!42;CL:0000514!6.21e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.05e-13;23!CL:0002494;1.81e-08;16!CL:1000306;1.97e-08;4!CL:0002547;1.97e-08;4!CL:0000499;1.18e-07;28!CL:0002334;5.50e-07;12!CL:0000327;7.83e-07;15!CL:0000737;8.10e-07;4!CL:0002615;8.10e-07;3 | |ontology_enrichment_celltype_v019=CL:0002620;3.05e-13;23!CL:0002494;1.81e-08;16!CL:1000306;1.97e-08;4!CL:0002547;1.97e-08;4!CL:0000499;1.18e-07;28!CL:0002334;5.50e-07;12!CL:0000327;7.83e-07;15!CL:0000737;8.10e-07;4!CL:0002615;8.10e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.15e-16,76;CL:0002620,1.71e-13,23;CL:0000048,1.20e-10,427;CL:0000723,3.54e-10,433;CL:0000034,1.41e-09,441;CL:1000306,2.09e-08,4;CL:0002547,2.09e-08,4;CL:0002494,2.25e-08,16;CL:0000136,2.26e-08,15;CL:0000499,7.74e-08,28;CL:0002320,7.93e-08,361;CL:0000134,4.28e-07,354;CL:0000737,5.41e-07,4;CL:0000327,5.61e-07,15;CL:0002334,6.05e-07,12;CL:0002615,8.26e-07,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;1.12e-08;5!DOID:450;1.12e-08;5!DOID:66;1.12e-08;5!DOID:423;1.12e-08;5!DOID:0080000;1.12e-08;5!DOID:11722;1.12e-08;5 | |ontology_enrichment_disease_v019=DOID:17;1.12e-08;5!DOID:450;1.12e-08;5!DOID:66;1.12e-08;5!DOID:423;1.12e-08;5!DOID:0080000;1.12e-08;5!DOID:11722;1.12e-08;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,6.31e-09,5;DOID:450,6.31e-09,5;DOID:66,6.31e-09,5;DOID:423,6.31e-09,5;DOID:0080000,6.31e-09,5;DOID:11722,6.31e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0004872!1.05e-13!84;UBERON:0002385!3.19e-11!63;UBERON:0001015!3.19e-11!63;UBERON:0000383!3.19e-11!63;UBERON:0001134!8.40e-11!61;UBERON:0002036!8.40e-11!61;UBERON:0003082!8.40e-11!61;UBERON:0004290!2.51e-09!70;UBERON:0000914!6.42e-09!83;UBERON:0002329!6.42e-09!83;UBERON:0003077!6.42e-09!83;UBERON:0003059!6.42e-09!83;UBERON:0007282!6.42e-09!83;UBERON:0009618!6.42e-09!83;UBERON:0007285!6.42e-09!83;UBERON:0000948!1.50e-08!24;UBERON:0005498!1.50e-08!24;UBERON:0004140!1.50e-08!24;UBERON:0009881!1.50e-08!24;UBERON:0004141!1.50e-08!24;UBERON:0003084!1.50e-08!24;UBERON:0007005!1.50e-08!24;UBERON:0004139!1.50e-08!24;UBERON:0004291!1.50e-08!24;UBERON:0004535!1.51e-08!110;UBERON:0002049!2.05e-08!79;UBERON:0007798!2.05e-08!79;UBERON:0000486!3.22e-08!82;UBERON:0001009!3.39e-08!113;UBERON:0004923!1.04e-07!57;UBERON:0007100!1.90e-07!27;UBERON:0001637!4.17e-07!42;UBERON:0003509!4.17e-07!42;UBERON:0004572!4.17e-07!42;UBERON:0001981!5.52e-07!60;UBERON:0007500!5.52e-07!60;UBERON:0004537!5.52e-07!60;UBERON:0006965!5.52e-07!60;UBERON:0000055!8.09e-07!69 | |ontology_enrichment_uberon=UBERON:0004872!1.05e-13!84;UBERON:0002385!3.19e-11!63;UBERON:0001015!3.19e-11!63;UBERON:0000383!3.19e-11!63;UBERON:0001134!8.40e-11!61;UBERON:0002036!8.40e-11!61;UBERON:0003082!8.40e-11!61;UBERON:0004290!2.51e-09!70;UBERON:0000914!6.42e-09!83;UBERON:0002329!6.42e-09!83;UBERON:0003077!6.42e-09!83;UBERON:0003059!6.42e-09!83;UBERON:0007282!6.42e-09!83;UBERON:0009618!6.42e-09!83;UBERON:0007285!6.42e-09!83;UBERON:0000948!1.50e-08!24;UBERON:0005498!1.50e-08!24;UBERON:0004140!1.50e-08!24;UBERON:0009881!1.50e-08!24;UBERON:0004141!1.50e-08!24;UBERON:0003084!1.50e-08!24;UBERON:0007005!1.50e-08!24;UBERON:0004139!1.50e-08!24;UBERON:0004291!1.50e-08!24;UBERON:0004535!1.51e-08!110;UBERON:0002049!2.05e-08!79;UBERON:0007798!2.05e-08!79;UBERON:0000486!3.22e-08!82;UBERON:0001009!3.39e-08!113;UBERON:0004923!1.04e-07!57;UBERON:0007100!1.90e-07!27;UBERON:0001637!4.17e-07!42;UBERON:0003509!4.17e-07!42;UBERON:0004572!4.17e-07!42;UBERON:0001981!5.52e-07!60;UBERON:0007500!5.52e-07!60;UBERON:0004537!5.52e-07!60;UBERON:0006965!5.52e-07!60;UBERON:0000055!8.09e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.59e-13;9!UBERON:0000042;6.59e-13;9!UBERON:0003688;6.77e-12;6!UBERON:0002358;6.77e-12;6!UBERON:0003684;6.77e-12;6!UBERON:0001178;6.77e-12;6!UBERON:0004797;1.97e-08;4!UBERON:0000415;1.97e-08;4!UBERON:0007240;1.97e-08;4!UBERON:0005742;1.97e-08;4!UBERON:0005734;1.97e-08;4!UBERON:0004664;1.97e-08;4!UBERON:0004663;1.97e-08;4!UBERON:0002097;3.19e-08;41!UBERON:0002199;9.02e-08;46!UBERON:0002416;9.02e-08;46!UBERON:0000948;5.74e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0004457;6.59e-13;9!UBERON:0000042;6.59e-13;9!UBERON:0003688;6.77e-12;6!UBERON:0002358;6.77e-12;6!UBERON:0003684;6.77e-12;6!UBERON:0001178;6.77e-12;6!UBERON:0004797;1.97e-08;4!UBERON:0000415;1.97e-08;4!UBERON:0007240;1.97e-08;4!UBERON:0005742;1.97e-08;4!UBERON:0005734;1.97e-08;4!UBERON:0004664;1.97e-08;4!UBERON:0004663;1.97e-08;4!UBERON:0002097;3.19e-08;41!UBERON:0002199;9.02e-08;46!UBERON:0002416;9.02e-08;46!UBERON:0000948;5.74e-07;22 | ||
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| ||
|short_description=p23@CCDC80 | |short_description=p23@CCDC80 | ||
}} | }} |
Latest revision as of 14:30, 19 September 2015
Short description: | p23@CCDC80 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_CCDC80_5end |
Coexpression cluster: | C333_Fibroblast_Smooth_Preadipocyte_Adipocyte_Ewing_Placental_sacrococcigeal |
Association with transcript: | 362bp_to_ENST00000475181_5end |
EntrezGene: | CCDC80 |
HGNC: | 30649 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.15e-16 | 76 |
skin fibroblast | 1.71e-13 | 23 |
multi fate stem cell | 1.20e-10 | 427 |
somatic stem cell | 3.54e-10 | 433 |
stem cell | 1.41e-09 | 441 |
fibroblast of tunica adventitia of artery | 2.09e-08 | 4 |
fibroblast of the aortic adventitia | 2.09e-08 | 4 |
cardiocyte | 2.25e-08 | 16 |
fat cell | 2.26e-08 | 15 |
stromal cell | 7.74e-08 | 28 |
connective tissue cell | 7.93e-08 | 361 |
mesenchymal cell | 4.28e-07 | 354 |
striated muscle cell | 5.41e-07 | 4 |
extracellular matrix secreting cell | 5.61e-07 | 15 |
preadipocyte | 6.05e-07 | 12 |
adipocyte of omentum tissue | 8.26e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 7.63e-12 | 6 |
peritoneum | 7.63e-12 | 6 |
abdominal cavity | 7.63e-12 | 6 |
visceral peritoneum | 7.63e-12 | 6 |
skin of body | 2.68e-11 | 41 |
integument | 1.64e-10 | 46 |
integumental system | 1.64e-10 | 46 |
splanchnic layer of lateral plate mesoderm | 1.10e-09 | 83 |
cavity lining | 3.12e-09 | 12 |
serous membrane | 3.12e-09 | 12 |
artery wall | 2.09e-08 | 4 |
tunica adventitia of artery | 2.09e-08 | 4 |
adventitia | 2.09e-08 | 4 |
tunica adventitia of blood vessel | 2.09e-08 | 4 |
aorta tunica adventitia | 2.09e-08 | 4 |
aorta wall | 2.09e-08 | 4 |
connective tissue | 4.93e-08 | 371 |
heart | 1.78e-07 | 24 |
primitive heart tube | 1.78e-07 | 24 |
primary heart field | 1.78e-07 | 24 |
anterior lateral plate mesoderm | 1.78e-07 | 24 |
heart tube | 1.78e-07 | 24 |
heart primordium | 1.78e-07 | 24 |
cardiac mesoderm | 1.78e-07 | 24 |
cardiogenic plate | 1.78e-07 | 24 |
heart rudiment | 1.78e-07 | 24 |
blood vessel layer | 5.17e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 6.31e-09 | 5 |
myotonic disease | 6.31e-09 | 5 |
muscle tissue disease | 6.31e-09 | 5 |
myopathy | 6.31e-09 | 5 |
muscular disease | 6.31e-09 | 5 |
myotonic dystrophy | 6.31e-09 | 5 |