FFCP PHASE2:Hg19::chrX:135338503..135338520,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:79649 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:25742 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=79649 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=25742 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=B4DWD2,Q8IWC1 | ||
|association_with_transcript=120bp_to_ENST00000370663,NM_001173516,uc011mwc.1_5end | |association_with_transcript=120bp_to_ENST00000370663,NM_001173516,uc011mwc.1_5end | ||
|cluster_id=chrX:135338503..135338520,- | |cluster_id=chrX:135338503..135338520,- | ||
Latest revision as of 14:35, 19 September 2015
| Short description: | p10@MAP7D3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_10_at_MAP7D3_5end |
| Coexpression cluster: | C165_epithelioid_Adipocyte_mesothelioma_myxofibrosarcoma_lung_gastric_Mesothelial |
| Association with transcript: | 120bp_to_ENST00000370663, NM_001173516, uc011mwc.1_5end |
| EntrezGene: | MAP7D3 |
| HGNC: | 25742 |
| UniProt: | B4DWD2Q8IWC1 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p10@MAP7D3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| chondroblast | 2.45e-12 | 6 |
| chondrocyte | 2.45e-12 | 6 |
| GAG secreting cell | 1.12e-08 | 9 |
| carbohydrate secreting cell | 1.12e-08 | 9 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| cartilage tissue | 3.27e-23 | 3 |
| skeletal tissue | 3.27e-23 | 3 |
| uterine cervix | 2.74e-12 | 6 |
| neck of organ | 2.74e-12 | 6 |
Showing 1 to 4 of 4 entries
| Ontology term | p-value | n |
|---|---|---|
| epithelioid sarcoma | 1.23e-66 | 1 |
| chondrosarcoma | 2.39e-66 | 1 |
| extraosseous chondrosarcoma | 2.39e-66 | 1 |
| myxoid chondrosarcoma | 2.39e-66 | 1 |
| extraskeletal myxoid chondrosarcoma | 2.39e-66 | 1 |
| mesenchymal cell neoplasm | 3.61e-34 | 2 |
| connective tissue cancer | 2.45e-12 | 6 |
| musculoskeletal system cancer | 2.45e-12 | 6 |
Showing 1 to 8 of 8 entries
