FFCP PHASE1:Hg19::chr6:106546808..106546833,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=639 | |EntrezGene=639 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9346 | |HGNC=9346 | ||
|TSSclassifier=strong | |||
|UniProt=Q86WM7 | |UniProt=Q86WM7 | ||
|association_with_transcript=0bp_to_ENST00000369089,uc003pre.2_5end | |association_with_transcript=0bp_to_ENST00000369089,uc003pre.2_5end | ||
|cluster_id=chr6:106546808..106546833,+ | |||
|coexpression_cluster_id=C1199 | |coexpression_cluster_id=C1199 | ||
|description=CAGE_peak_3_at_PRDM1_5end | |description=CAGE_peak_3_at_PRDM1_5end | ||
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|ontology_enrichment_celltype=CL:0000791!2.15e-13!18;CL:0000789!2.15e-13!18;CL:0002420!2.15e-13!18;CL:0002419!2.15e-13!18;CL:0000790!2.15e-13!18;CL:0000084!1.34e-11!25;CL:0000827!1.34e-11!25;CL:0000738!5.75e-11!140;CL:0000838!8.24e-11!52;CL:0000542!1.30e-10!53;CL:0000051!1.30e-10!53;CL:0002087!1.03e-09!119;CL:0000625!7.27e-09!11;CL:0002031!1.55e-07!124 | |ontology_enrichment_celltype=CL:0000791!2.15e-13!18;CL:0000789!2.15e-13!18;CL:0002420!2.15e-13!18;CL:0002419!2.15e-13!18;CL:0000790!2.15e-13!18;CL:0000084!1.34e-11!25;CL:0000827!1.34e-11!25;CL:0000738!5.75e-11!140;CL:0000838!8.24e-11!52;CL:0000542!1.30e-10!53;CL:0000051!1.30e-10!53;CL:0002087!1.03e-09!119;CL:0000625!7.27e-09!11;CL:0002031!1.55e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000791;8.04e-17;18!CL:0000789;8.04e-17;18!CL:0002419;8.04e-17;18!CL:0000084;1.25e-14;25!CL:0000625;5.59e-11;11!CL:0000542;5.54e-08;53!CL:0002087;8.27e-07;104!CL:0000624;8.51e-07;6 | |ontology_enrichment_celltype_v019=CL:0000791;8.04e-17;18!CL:0000789;8.04e-17;18!CL:0002419;8.04e-17;18!CL:0000084;1.25e-14;25!CL:0000625;5.59e-11;11!CL:0000542;5.54e-08;53!CL:0002087;8.27e-07;104!CL:0000624;8.51e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,8.50e-17,18;CL:0000789,8.50e-17,18;CL:0002420,8.50e-17,18;CL:0002419,8.50e-17,18;CL:0000790,8.50e-17,18;CL:0000838,1.30e-14,52;CL:0000084,1.31e-14,25;CL:0000827,1.31e-14,25;CL:0000542,4.65e-14,53;CL:0000051,4.65e-14,53;CL:0000738,2.47e-12,136;CL:0002087,7.63e-12,115;CL:0000625,5.76e-11,11;CL:0002031,3.36e-09,120;CL:0000624,8.77e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;8.04e-17;18!CL:0000051;5.54e-08;53 | |ontology_enrichment_development_v019=CL:0000790;8.04e-17;18!CL:0000051;5.54e-08;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.08e-19!115;UBERON:0000178!5.72e-11!15;UBERON:0000179!5.72e-11!15;UBERON:0000463!5.72e-11!15 | |ontology_enrichment_uberon=UBERON:0007023!1.08e-19!115;UBERON:0000178!5.72e-11!15;UBERON:0000179!5.72e-11!15;UBERON:0000463!5.72e-11!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.02e-13;15!UBERON:0000179;1.02e-13;15!UBERON:0000463;1.02e-13;15 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.02e-13;15!UBERON:0000179;1.02e-13;15!UBERON:0000463;1.02e-13;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.41e-17,114;UBERON:0000178,1.13e-13,15;UBERON:0000179,1.13e-13,15;UBERON:0000463,1.13e-13,15 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,1.89515962028049,0,0,0,0,0,0,0,0,1.20538905604795,0,0.487932798790507,0,0,0,0,0,0,3.132949635666,6.15754420874593,5.66717625458491,13.3743854128627,55.6552627240958,9.75341576891279,0,1.204823675113,13.6808983761711,0.0774672005803016,0,0,13.8498852132969,22.8620670115962,14.1057065965304,0.671746422719773,6.47787332037959,1.80302897343931,0.145398238779565,0,0.242584061187816,0.697287110717054,0,0.309706370895104,10.9323109082417,4.35473201099471,7.56743135643473,3.10271112662957,0.645484683583826,0,0.941211697713023,0.545812300115692,0.674170453335254,2.75475503133812,2.88836124368484,1.27867425159808,2.30895910130701,1.79517291859469,1.27867425159808,3.48251086354301,3.40431134814684,3.73693349397345,10.3011952755265,5.73631210262222,11.9453864587814,4.84319602106695,4.05105399586321,3.16462387440884,0,0.212604299965044,0.209658645508376,0.22465726229299,0.150176892841506,0,0,0.19891667719909,0,1.75996244461323,1.09227722252426,0,0,0,1.14950487990897,2.64417949113945,0,2.84606484554724,7.6340834618222,4.58727873750275,0,19.0572911413722,0,45.6366666664093,36.5500009356723,59.2132317118587,35.2763505274331,10.4295125322749,16.0972253949809,5.84480185223734,34.4258311775186,119.020786619834,119.185235285988,165.461160760425,20.2384285166567,21.4597923473799,6.08420247033602,7.46145048021791,15.6493666296928,2.96573126324121,4.81573490561484,1.04535523804977,10.7643875562688,25.6757730713287,40.891666012433,54.9052731682321,21.0253173453904,13.6727525309848,20.9099449778642,32.3736506017211,46.8430996825171,24.9861453104692,27.466161237106,20.5281999230262,63.9093376022402,50.8136371988664,38.0888182211761,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0,0,0.087834785693126,2.68507104770311,2.91436230634034,2.96627554227544,0,0.696518949197069,0,0.238490624305342,0,0.371457501329565,0,0.860234595106124,0.347140501607594,0,0.419499436209906,0,0,0,1.06729878806013,0,0,0,0,0,0,0.357198913136319,0,0.225222960966644,0,0.949265659568129,0,9.22462922052443,3.87780264148325,5.23312862571041,0,0.12663051166458,1.05927344650575,1.14734648299525,0.709336764396714,0,0,0,0,0.404132016209064,0.490385709340376,0,0,0.234321431833797,0.312160076830321,0,0.448346041655403,0.117434498643765,0,0.140450806702248,0,0,0,2.37600571456411,0,0,0,0,0,0,0,0,0.150238058906597,0,0.358779271377724,0.213557388818567,0.635795703478686,1.80054657650641,0.618315175430633,0.772921620136887,1.11670113798954,0.675105328965065,0.292311015483596,0.757301322732344,0.552299391853796,0.323292113637624,0.355009592516614,0.10075209822764,0.339121184620975,1.54608682530637,2.45471508531751,2.29443676311203,0.243947412259191,0.132529768321485,0.116193942869518,0.518305275076852,0.504641701751257,0,0,1.28648187638577,1.38134921352481,0.928735856063958,0,3.54920400119532,2.36018566109342,3.61516544825223,2.42646740011267,2.61455332910887,1.89816495288877,1.8876383142423,1.17732879075208,1.92373578473195,0.738155454624648,0,0.4115740113314,0,1.26755034821831,1.96565443335525,2.36315962672562,0,0,0,1.64625428112938,7.86812272803337,2.91534019993729,8.88849073521884,0.325808305310325,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,4.36753533317035,4.39502801451398,0,0,0.766765358330422,0,0,0.207328115540772,0.144119953416961,0.25248486685276,0.063497894292169,0.381988425558278,0,0,0.102827492703324,0.300343057843917,0,0.224262168690721,0,0,0.646358578788889,0,0.845302752556,3.19125739901845,1.04007436911366,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.51847094350807,73.4924735553189,79.5665751231619,67.7651231557071,0,0,0,0,0,2.24702107184155,2.99161459204025,4.97298616123243,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0.737476674166813,0.521301686808497,0,0,59.3424234972687,28.2585603072388,35.8604594219573,0,0,0,0.248107807818777,0.153461973288062,0.561320188866147,0.512556597022804,0,0.482561763430822,0,0.308419387605311,0.532685175939381,0.98552587216571,3.63478100428535,1.39452454151951,0,2.40607764363942,8.37936999316657,0.34444334449382,0,0,0,0,0,0,0,0,0.340187410553031,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,1.75169719801128,0,0,5.16838984196555,4.55042172225565,0,0.580024309752732,0.308097234229289,0.15350367472613,0.137836572484531,0.107420244868274,0,0.340906509664404,0.0890320356467374,7.27253627588304,2.11409074101617,3.95599408733211,3.2370489873776,2.78907329578371,1.88887408098384,0,1.23213432070436,0,0,0.74129687641568,0.143124886741991,0,0,0,0.511795582622668,0,1.59101623962968,0,0.179872457583315,0,0.117812402345686,1.01091240786658,0,0.421258456238981,0.975267478179181,3.65570234446927,0,0.545999645631943,1.1312434556297,0,0,0,0,0,0.655894752046633,0.202910376962704,1.8589409885985,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,5.96577098898175,3.35151137767894,6.53345909167936,1.60044461320525,19.3727417702053,8.42357378338128,7.98174276366016,6.43225520579487,14.2085330585007,16.0573813499899,13.1018853050057,19.0585420366231,18.5113022888787,14.2664128462398,20.521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| ||
|short_description=p3@PRDM1 | |short_description=p3@PRDM1 | ||
}} | }} |
Latest revision as of 15:01, 19 September 2015
Short description: | p3@PRDM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PRDM1_5end |
Coexpression cluster: | C1199_CD4_Natural_CD8_Basophils_Peripheral_mycosis_cord |
Association with transcript: | 0bp_to_ENST00000369089, uc003pre.2_5end |
EntrezGene: | PRDM1 |
HGNC: | 9346 |
UniProt: | Q86WM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 8.50e-17 | 18 |
alpha-beta T cell | 8.50e-17 | 18 |
immature T cell | 8.50e-17 | 18 |
mature T cell | 8.50e-17 | 18 |
immature alpha-beta T cell | 8.50e-17 | 18 |
lymphoid lineage restricted progenitor cell | 1.30e-14 | 52 |
T cell | 1.31e-14 | 25 |
pro-T cell | 1.31e-14 | 25 |
lymphocyte | 4.65e-14 | 53 |
common lymphoid progenitor | 4.65e-14 | 53 |
leukocyte | 2.47e-12 | 136 |
nongranular leukocyte | 7.63e-12 | 115 |
CD8-positive, alpha-beta T cell | 5.76e-11 | 11 |
hematopoietic lineage restricted progenitor cell | 3.36e-09 | 120 |
CD4-positive, alpha-beta T cell | 8.77e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.41e-17 | 114 |
blood | 1.13e-13 | 15 |
haemolymphatic fluid | 1.13e-13 | 15 |
organism substance | 1.13e-13 | 15 |