FFCP PHASE1:Hg19::chr3:72937182..72937270,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=727936 | |EntrezGene=727936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33383 | |HGNC=33383 | ||
|TSSclassifier=strong | |||
|UniProt=A0PJZ3 | |UniProt=A0PJZ3 | ||
|association_with_transcript=0bp_to_ENST00000389617_5end | |association_with_transcript=0bp_to_ENST00000389617_5end | ||
|cluster_id=chr3:72937182..72937270,+ | |||
|coexpression_cluster_id=C4344 | |||
|description=CAGE_peak_1_at_GXYLT2_5end | |description=CAGE_peak_1_at_GXYLT2_5end | ||
|id=chr3:72937182..72937270,+ | |id=chr3:72937182..72937270,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.73e-33!180;CL:0000183!2.79e-17!59;CL:0000187!5.98e-17!54;CL:0000680!9.48e-17!57;CL:0000056!9.48e-17!57;CL:0000355!9.48e-17!57;CL:0000393!5.11e-15!60;CL:0000211!5.11e-15!60;CL:0000057!7.42e-13!75;CL:0000192!2.90e-12!42;CL:0000514!2.90e-12!42;CL:0000359!8.19e-09!32;CL:0002494!9.73e-08!16 | |ontology_enrichment_celltype=CL:0000055!5.73e-33!180;CL:0000183!2.79e-17!59;CL:0000187!5.98e-17!54;CL:0000680!9.48e-17!57;CL:0000056!9.48e-17!57;CL:0000355!9.48e-17!57;CL:0000393!5.11e-15!60;CL:0000211!5.11e-15!60;CL:0000057!7.42e-13!75;CL:0000192!2.90e-12!42;CL:0000514!2.90e-12!42;CL:0000359!8.19e-09!32;CL:0002494!9.73e-08!16 | ||
|ontology_enrichment_celltype_v019=CL:0000187;2.67e-10;55!CL:0000192;2.58e-09;43!CL:0000393;6.77e-09;61!CL:0000211;6.77e-09;61!CL:0000359;2.14e-08;32!CL:0002494;8.15e-08;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000187,1.07e-17,55;CL:0000680,1.74e-17,58;CL:0000056,1.74e-17,58;CL:0000355,1.74e-17,58;CL:0000393,1.60e-15,61;CL:0000211,1.60e-15,61;CL:0000057,2.93e-13,76;CL:0000192,6.47e-13,43;CL:0000514,6.47e-13,43;CL:0000359,6.33e-09,32;CL:0002494,7.81e-08,16 | |||
|ontology_enrichment_development_v019=CL:0000355;5.18e-10;58!CL:0000514;2.58e-09;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.37e-21!347;UBERON:0000475!7.66e-20!365;UBERON:0000914!1.59e-18!83;UBERON:0002329!1.59e-18!83;UBERON:0003077!1.59e-18!83;UBERON:0003059!1.59e-18!83;UBERON:0007282!1.59e-18!83;UBERON:0009618!1.59e-18!83;UBERON:0007285!1.59e-18!83;UBERON:0005256!6.85e-18!143;UBERON:0004290!3.26e-17!70;UBERON:0001134!1.83e-16!61;UBERON:0002036!1.83e-16!61;UBERON:0003082!1.83e-16!61;UBERON:0002385!1.86e-16!63;UBERON:0001015!1.86e-16!63;UBERON:0000383!1.86e-16!63;UBERON:0000486!3.50e-14!82;UBERON:0000119!3.60e-14!312;UBERON:0002100!4.38e-14!216;UBERON:0000483!1.16e-13!309;UBERON:0003104!4.87e-13!238;UBERON:0009142!4.87e-13!238;UBERON:0007100!5.27e-11!27;UBERON:0000477!2.15e-10!286;UBERON:0000948!2.45e-10!24;UBERON:0005498!2.45e-10!24;UBERON:0004140!2.45e-10!24;UBERON:0009881!2.45e-10!24;UBERON:0004141!2.45e-10!24;UBERON:0003084!2.45e-10!24;UBERON:0007005!2.45e-10!24;UBERON:0004139!2.45e-10!24;UBERON:0004291!2.45e-10!24;UBERON:0000490!3.13e-09!138;UBERON:0000468!1.72e-08!659;UBERON:0003103!2.59e-08!69;UBERON:0004111!1.52e-07!241;UBERON:0003914!2.39e-07!118;UBERON:0000922!3.21e-07!612;UBERON:0002050!7.15e-07!605;UBERON:0005423!7.15e-07!605 | |ontology_enrichment_uberon=UBERON:0000481!2.37e-21!347;UBERON:0000475!7.66e-20!365;UBERON:0000914!1.59e-18!83;UBERON:0002329!1.59e-18!83;UBERON:0003077!1.59e-18!83;UBERON:0003059!1.59e-18!83;UBERON:0007282!1.59e-18!83;UBERON:0009618!1.59e-18!83;UBERON:0007285!1.59e-18!83;UBERON:0005256!6.85e-18!143;UBERON:0004290!3.26e-17!70;UBERON:0001134!1.83e-16!61;UBERON:0002036!1.83e-16!61;UBERON:0003082!1.83e-16!61;UBERON:0002385!1.86e-16!63;UBERON:0001015!1.86e-16!63;UBERON:0000383!1.86e-16!63;UBERON:0000486!3.50e-14!82;UBERON:0000119!3.60e-14!312;UBERON:0002100!4.38e-14!216;UBERON:0000483!1.16e-13!309;UBERON:0003104!4.87e-13!238;UBERON:0009142!4.87e-13!238;UBERON:0007100!5.27e-11!27;UBERON:0000477!2.15e-10!286;UBERON:0000948!2.45e-10!24;UBERON:0005498!2.45e-10!24;UBERON:0004140!2.45e-10!24;UBERON:0009881!2.45e-10!24;UBERON:0004141!2.45e-10!24;UBERON:0003084!2.45e-10!24;UBERON:0007005!2.45e-10!24;UBERON:0004139!2.45e-10!24;UBERON:0004291!2.45e-10!24;UBERON:0000490!3.13e-09!138;UBERON:0000468!1.72e-08!659;UBERON:0003103!2.59e-08!69;UBERON:0004111!1.52e-07!241;UBERON:0003914!2.39e-07!118;UBERON:0000922!3.21e-07!612;UBERON:0002050!7.15e-07!605;UBERON:0005423!7.15e-07!605 | ||
|ontology_enrichment_uberon_v019=UBERON:0007100;9.61e-11;25!UBERON:0000948;4.06e-10;22!UBERON:0002385;4.69e-08;31!UBERON:0001015;4.69e-08;31!UBERON:0000383;4.69e-08;31 | |||
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| ||
|short_description=p1@GXYLT2 | |short_description=p1@GXYLT2 | ||
}} | }} |
Latest revision as of 15:06, 19 September 2015
Short description: | p1@GXYLT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GXYLT2_5end |
Coexpression cluster: | C4344_pleomorphic_Skeletal_Hodgkin_mesenchymal_Osteoblast_Chondrocyte_epithelioid |
Association with transcript: | 0bp_to_ENST00000389617_5end |
EntrezGene: | GXYLT2 |
HGNC: | 33383 |
UniProt: | A0PJZ3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle cell | 1.07e-17 | 55 |
muscle precursor cell | 1.74e-17 | 58 |
myoblast | 1.74e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.74e-17 | 58 |
electrically responsive cell | 1.60e-15 | 61 |
electrically active cell | 1.60e-15 | 61 |
fibroblast | 2.93e-13 | 76 |
smooth muscle cell | 6.47e-13 | 43 |
smooth muscle myoblast | 6.47e-13 | 43 |
vascular associated smooth muscle cell | 6.33e-09 | 32 |
cardiocyte | 7.81e-08 | 16 |