FFCP PHASE1:Hg19::chr1:8763463..8763499,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:8763463..8763499,-
|short_description=p6@RERE
|description=CAGE_peak_6_at_RERE_5end
|association_with_transcript=-185bp_to_ENST00000468247_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=473 | |EntrezGene=473 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9965 | |HGNC=9965 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-185bp_to_ENST00000468247_5end | |||
|cluster_id=chr1:8763463..8763499,- | |||
|description=CAGE_peak_6_at_RERE_5end | |||
|id=chr1:8763463..8763499,- | |||
|ontology_enrichment_celltype=CL:0000236!1.09e-09!14;CL:0000945!1.94e-07!24;CL:0000826!1.94e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.30e-09;13!CL:0000945;1.66e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,6.15e-10,14;CL:0000945,1.41e-07,24;CL:0000826,1.41e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!1.52e-10!143;DOID:162!3.17e-08!235;DOID:305!1.25e-07!106;DOID:3095!1.64e-07!22;DOID:2994!1.64e-07!22;DOID:14566!2.05e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.21e-07;22!DOID:2994;1.21e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.83e-10,143;DOID:162,9.35e-08,235;DOID:3095,1.08e-07,22;DOID:2994,1.08e-07,22;DOID:305,2.77e-07,106;DOID:14566,4.58e-07,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;3.99e-08;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p6@RERE | |||
}} | }} |
Latest revision as of 15:07, 19 September 2015
Short description: | p6@RERE |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_RERE_5end |
Coexpression cluster: | NA |
Association with transcript: | -185bp_to_ENST00000468247_5end |
EntrezGene: | RERE |
HGNC: | 9965 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 6.15e-10 | 14 |
lymphocyte of B lineage | 1.41e-07 | 24 |
pro-B cell | 1.41e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.83e-10 | 143 |
cancer | 9.35e-08 | 235 |
germ cell and embryonal cancer | 1.08e-07 | 22 |
germ cell cancer | 1.08e-07 | 22 |
carcinoma | 2.77e-07 | 106 |
disease of cellular proliferation | 4.58e-07 | 239 |