FFCP PHASE1:Hg19::chr6:107077303..107077314,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:107077303..107077314,-
|short_description=p3@RTN4IP1
|description=CAGE_peak_3_at_RTN4IP1_5end
|association_with_transcript=47bp_to_ENST00000369063_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84816 | |EntrezGene=84816 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18647 | |HGNC=18647 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WWV3 | |UniProt=Q8WWV3 | ||
|association_with_transcript=47bp_to_ENST00000369063_5end | |||
|cluster_id=chr6:107077303..107077314,- | |||
|description=CAGE_peak_3_at_RTN4IP1_5end | |||
|id=chr6:107077303..107077314,- | |||
|ontology_enrichment_celltype=CL:0000945!2.24e-10!24;CL:0000826!2.24e-10!24;CL:0000037!5.47e-09!172;CL:0000566!5.47e-09!172;CL:0000542!8.44e-09!53;CL:0000051!8.44e-09!53;CL:0000988!1.14e-08!182;CL:0000838!3.42e-08!52;CL:0000236!8.95e-08!14;CL:0002032!9.27e-08!165;CL:0000837!9.27e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.40e-22;13!CL:0000945;3.13e-16;24!CL:0000540;2.60e-13;6!CL:0000404;2.60e-13;6!CL:0000817;1.10e-09;1!CL:0000785;1.10e-09;1!CL:0000819;1.10e-09;1!CL:0000542;3.28e-09;53!CL:0002322;1.36e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,5.35e-21,14;CL:0000945,2.35e-16,24;CL:0000826,2.35e-16,24;CL:0000540,3.36e-13,6;CL:0000031,3.36e-13,6;CL:0000404,3.36e-13,6;CL:0000817,2.40e-12,3;CL:0000047,4.94e-10,8;CL:0000819,5.79e-10,1;CL:0000542,4.31e-09,53;CL:0000051,4.31e-09,53;CL:0002322,2.02e-07,5;CL:0000838,3.88e-07,52 | |||
|ontology_enrichment_development_v019=CL:0000031;2.60e-13;6!CL:0000051;3.28e-09;53 | |||
|ontology_enrichment_disease=DOID:2531!6.51e-14!51;DOID:0060083!6.51e-14!51;DOID:1240!2.85e-10!39;DOID:8692!2.23e-09!31;DOID:162!1.45e-07!235;DOID:14566!6.24e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:0060073;1.10e-09;1!DOID:8675;1.10e-09;1!DOID:12603;1.10e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,5.79e-10,1;DOID:8675,5.79e-10,1;DOID:12603,6.88e-10,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,0,0.251085279189606,0.152826811495903,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,1.85921281392724,0.710846162437108,0.880801318004542,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211255286311942,0.212604299965044,0.419317291016752,0.22465726229299,0,0,0.570025487482497,0,0.182664153764634,1.75996244461323,1.09227722252426,0,0.853460445133014,1.20118796110804,1.14950487990897,0.661044872784862,0.954053754535364,0.569212969109448,0,0,0,0,0.263384084775077,0.393419540227666,0.393010762749165,0,0.334372990781356,0,0,0,0.111410456885174,0,0.886135578334485,0.270803863765016,0.25618263945135,0.130059347559878,0.328875809207352,0,0,0,0,0,0.113309342697566,0.766440987203842,0,0,0,0,0,0,0,0,0,0,0.604820229674197,0,0.724122019413995,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0,0.196468613246569,0,0,0.324547393654683,0,0.132957960518865,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0.103325781175765,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.487894824518382,1.19276791489337,0.580969714347592,0.414644220061482,1.00928340350251,0.36497735907583,0,0,0,0,0,0.118306800039844,0.337169380156203,0.482022059766964,0.220587945464788,0,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0.590789906681404,0.441463099414651,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0.231860809950154,0,0,0,0,0,0,0,0,0.445893486866185,0,0.16798212819886,0,0,0,0,0.492663237895943,0.088048434013226,0,0,0,0.063497894292169,0,0,0,0.205654985406647,0.300343057843917,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0.301439377059586,0,0,0,0,2.10833939483032,0,0,0,0,0.205476322550383,0,0.112085143993527,0.197030760201927,0.215627574859517,0.513372145118994,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32845119707087,0,0,0,0,0,0.431428401637234,0.106727557803444,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.483437798366489,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0.27470839445503,0.742585499285292,0,0,0,0,0.308097234229289,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0.274537029736055,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0.379473173765715,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0.213648142254946,0,0,1.67222857613147,1.44269212976445,0.142283686696828,0.318852545457645,0.199579371432817,1.1490322207942,0.211673582723883,0,0,0.456469358066384,0.783399478865116,0,0.169291777801603,0.802940375518498,0.201799707191048,0.425846237690326,0.343505344755765,0.307240764308458,0.223676107892416,0.166849141711909,0.781552381608161,0.278406173895242,0,0.270455678475983,0.33307196799782,0,0.37428108081644,0,0,0,0,0,0,0,0,0.140669416410513,0,0.16480387422676,0.211125408127993,0,0,1.0077309914171,0,0.123084805461069,0,0,0.358042349351218,0.511572370226872,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0.583209226766509,0,0,0,0,0.110579259931225,0,0,0.10893846351899,0,0,0,0.23056390438806,0.718061155278177,0.108647371922008,0,0.274792780205587,0,0,0.31396051279005,0.166211681900156,0.225595660617181,0,0.167821586975843,0,0.317873157960757,0,0,0.424059214301822,0.432777279484182,0,0,0,0.296521128680622,0.247127877893006,0.313265848516366,0,0,0.234264445725339,1.82454789215666,0,0,0,1.20990716048664,0,0,1.9542044523884,0.622129148383483,0,0,0,0,0,0,0,0,0.174118413160805,0.17472666824203,0,0.19351266257817,0.219267951258557,0,0,0,0,0,0.19871461170299,0.253243183823515,1.36885967914362,0,0,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0,0,0,0.86661500537946,0.247247575143499,0.404421263125109,0.0984274815147488,0.592713324460491,0.795229689809303,0.272406812223151,1.12527203925513,1.2378549293751,3.73896304226267,0,0,0.121499113316049,0.335434687599266,0.315222829196793,0.104909176269996,0,0,0,0.714695326373367,0,0.25426853765475,0,0,0,0,0.328370082997356,0,0.113312091520126,0.293104467356165,0,0.129282956361551,0,0,0,0,0,0,0,0,0.730755590285376,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0.18628920882415,0,0,0.151649117541648,0,0,0.468334905806882,0.579684114443301,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0.657852148736121,0.176689145945881,0.192914038270915,0,0,0,0,0.138258436151731,0,0,0,0.327609848846413,0,0,0,0.213383459388282,0,0,0,0,0,0.127894371303652,0,0,0,0.169732529954025,0.212574920101683,0,0,0,1.97154362503133,0,0.352675943690684,0.3062454773532,0.0642292250964595,0,0,0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| ||
|short_description=p3@RTN4IP1 | |||
}} | }} |
Latest revision as of 15:47, 19 September 2015
Short description: | p3@RTN4IP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RTN4IP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 47bp_to_ENST00000369063_5end |
EntrezGene: | RTN4IP1 |
HGNC: | 18647 |
UniProt: | Q8WWV3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 5.35e-21 | 14 |
lymphocyte of B lineage | 2.35e-16 | 24 |
pro-B cell | 2.35e-16 | 24 |
neuron | 3.36e-13 | 6 |
neuroblast | 3.36e-13 | 6 |
electrically signaling cell | 3.36e-13 | 6 |
precursor B cell | 2.40e-12 | 3 |
neuronal stem cell | 4.94e-10 | 8 |
B-1 B cell | 5.79e-10 | 1 |
lymphocyte | 4.31e-09 | 53 |
common lymphoid progenitor | 4.31e-09 | 53 |
embryonic stem cell | 2.02e-07 | 5 |
lymphoid lineage restricted progenitor cell | 3.88e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 5.79e-10 | 1 |
lymphosarcoma | 5.79e-10 | 1 |
acute leukemia | 6.88e-10 | 1 |