FFCP PHASE1:Hg19::chr6:107077347..107077378,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84816 | |EntrezGene=84816 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18647 | |HGNC=18647 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WWV3,G3V1R2 | |UniProt=Q8WWV3,G3V1R2 | ||
|association_with_transcript=0bp_to_ENST00000369063,ENST00000539449,NM_032730,uc003prj.2,uc010kdd.2_5end | |association_with_transcript=0bp_to_ENST00000369063,ENST00000539449,NM_032730,uc003prj.2,uc010kdd.2_5end | ||
|cluster_id=chr6:107077347..107077378,- | |||
|description=CAGE_peak_1_at_RTN4IP1_5end | |description=CAGE_peak_1_at_RTN4IP1_5end | ||
|id=chr6:107077347..107077378,- | |id=chr6:107077347..107077378,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:14566!1.88e-08!239;DOID:162!6.24e-08!235 | |ontology_enrichment_disease=DOID:14566!1.88e-08!239;DOID:162!6.24e-08!235 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:14566,2.04e-08,239;DOID:162,6.76e-08,235 | |||
|ontology_enrichment_uberon=UBERON:0000153!1.90e-09!129;UBERON:0007811!1.90e-09!129;UBERON:0000033!1.77e-08!123;UBERON:0000924!4.74e-08!173;UBERON:0006601!4.74e-08!173;UBERON:0004121!4.81e-08!169;UBERON:0002780!5.93e-08!41;UBERON:0001890!5.93e-08!41;UBERON:0006240!5.93e-08!41;UBERON:0000073!1.66e-07!94;UBERON:0001016!1.66e-07!94;UBERON:0003080!2.74e-07!42;UBERON:0000955!7.80e-07!69;UBERON:0006238!7.80e-07!69 | |ontology_enrichment_uberon=UBERON:0000153!1.90e-09!129;UBERON:0007811!1.90e-09!129;UBERON:0000033!1.77e-08!123;UBERON:0000924!4.74e-08!173;UBERON:0006601!4.74e-08!173;UBERON:0004121!4.81e-08!169;UBERON:0002780!5.93e-08!41;UBERON:0001890!5.93e-08!41;UBERON:0006240!5.93e-08!41;UBERON:0000073!1.66e-07!94;UBERON:0001016!1.66e-07!94;UBERON:0003080!2.74e-07!42;UBERON:0000955!7.80e-07!69;UBERON:0006238!7.80e-07!69 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0011216,3.18e-08,223;UBERON:0004121,4.60e-08,171;UBERON:0000924,4.60e-08,171;UBERON:0006601,4.60e-08,171;UBERON:0002780,5.81e-08,41;UBERON:0001890,5.81e-08,41;UBERON:0003080,5.81e-08,41;UBERON:0006240,5.81e-08,41;UBERON:0001016,1.19e-07,89;UBERON:0010314,1.58e-07,132;UBERON:0000955,2.37e-07,68;UBERON:0006238,2.37e-07,68;UBERON:0000073,5.71e-07,53;UBERON:0002616,5.71e-07,53;UBERON:0001049,5.76e-07,56;UBERON:0005068,5.76e-07,56;UBERON:0006241,5.76e-07,56;UBERON:0007135,5.76e-07,56;UBERON:0003075,9.05e-07,82;UBERON:0007284,9.05e-07,82 | |||
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| ||
|short_description=p1@RTN4IP1 | |short_description=p1@RTN4IP1 | ||
}} | }} |
Latest revision as of 15:50, 19 September 2015
Short description: | p1@RTN4IP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RTN4IP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000369063, ENST00000539449, NM_032730, uc003prj.2, uc010kdd.2_5end |
EntrezGene: | RTN4IP1 |
HGNC: | 18647 |
UniProt: | Q8WWV3G3V1R2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
organ system subdivision | 3.18e-08 | 223 |
ectoderm-derived structure | 4.60e-08 | 171 |
ectoderm | 4.60e-08 | 171 |
presumptive ectoderm | 4.60e-08 | 171 |
regional part of forebrain | 5.81e-08 | 41 |
forebrain | 5.81e-08 | 41 |
anterior neural tube | 5.81e-08 | 41 |
future forebrain | 5.81e-08 | 41 |
nervous system | 1.19e-07 | 89 |
structure with developmental contribution from neural crest | 1.58e-07 | 132 |
brain | 2.37e-07 | 68 |
future brain | 2.37e-07 | 68 |
regional part of nervous system | 5.71e-07 | 53 |
regional part of brain | 5.71e-07 | 53 |
neural tube | 5.76e-07 | 56 |
neural rod | 5.76e-07 | 56 |
future spinal cord | 5.76e-07 | 56 |
neural keel | 5.76e-07 | 56 |
neural plate | 9.05e-07 | 82 |
presumptive neural plate | 9.05e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.04e-08 | 239 |
cancer | 6.76e-08 | 235 |