FFCP PHASE1:Hg19::chr2:204399947..204399958,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65059 | |EntrezGene=65059 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14436 | |HGNC=14436 | ||
|TSSclassifier=strong | |||
|UniProt=C9J164 | |UniProt=C9J164 | ||
|association_with_transcript=26bp_to_ENST00000457812_5end | |association_with_transcript=26bp_to_ENST00000457812_5end | ||
|cluster_id=chr2:204399947..204399958,- | |||
|description=CAGE_peak_5_at_RAPH1_5end | |description=CAGE_peak_5_at_RAPH1_5end | ||
|id=chr2:204399947..204399958,- | |id=chr2:204399947..204399958,- | ||
|ontology_enrichment_celltype=CL:0000055!2.91e-07!180;CL:0002321!6.75e-07!248 | |ontology_enrichment_celltype=CL:0000055!2.91e-07!180;CL:0002321!6.75e-07!248 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.71e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.87e-12!659;UBERON:0000480!6.54e-12!626;UBERON:0000467!9.15e-12!625;UBERON:0000922!1.05e-10!612;UBERON:0000483!1.28e-10!309;UBERON:0000119!1.78e-10!312;UBERON:0000477!4.32e-10!286;UBERON:0000923!5.65e-10!604;UBERON:0005291!5.65e-10!604;UBERON:0006598!5.65e-10!604;UBERON:0002532!5.65e-10!604;UBERON:0002050!9.39e-10!605;UBERON:0005423!9.39e-10!605;UBERON:0000025!4.89e-09!194;UBERON:0004111!1.25e-08!241;UBERON:0000481!2.94e-08!347;UBERON:0004872!4.91e-08!84;UBERON:0001981!3.30e-07!60;UBERON:0007500!3.30e-07!60;UBERON:0004537!3.30e-07!60;UBERON:0006965!3.30e-07!60;UBERON:0002049!8.14e-07!79;UBERON:0007798!8.14e-07!79 | |ontology_enrichment_uberon=UBERON:0000468!4.87e-12!659;UBERON:0000480!6.54e-12!626;UBERON:0000467!9.15e-12!625;UBERON:0000922!1.05e-10!612;UBERON:0000483!1.28e-10!309;UBERON:0000119!1.78e-10!312;UBERON:0000477!4.32e-10!286;UBERON:0000923!5.65e-10!604;UBERON:0005291!5.65e-10!604;UBERON:0006598!5.65e-10!604;UBERON:0002532!5.65e-10!604;UBERON:0002050!9.39e-10!605;UBERON:0005423!9.39e-10!605;UBERON:0000025!4.89e-09!194;UBERON:0004111!1.25e-08!241;UBERON:0000481!2.94e-08!347;UBERON:0004872!4.91e-08!84;UBERON:0001981!3.30e-07!60;UBERON:0007500!3.30e-07!60;UBERON:0004537!3.30e-07!60;UBERON:0006965!3.30e-07!60;UBERON:0002049!8.14e-07!79;UBERON:0007798!8.14e-07!79 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007500,8.14e-09,59;UBERON:0001981,8.14e-09,59;UBERON:0004537,8.14e-09,59;UBERON:0006965,8.14e-09,59;UBERON:0004872,1.71e-08,83;UBERON:0002049,2.67e-08,78;UBERON:0007798,2.67e-08,78;UBERON:0000055,3.60e-08,68;UBERON:0003914,1.80e-07,117;UBERON:0004535,3.06e-07,109;UBERON:0000487,3.78e-07,22;UBERON:0001009,8.65e-07,112;UBERON:0004573,8.91e-07,33;UBERON:0004571,8.91e-07,33 | |||
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| ||
|short_description=p5@RAPH1 | |short_description=p5@RAPH1 | ||
}} | }} |
Latest revision as of 15:54, 19 September 2015
Short description: | p5@RAPH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_RAPH1_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENST00000457812_5end |
EntrezGene: | RAPH1 |
HGNC: | 14436 |
UniProt: | C9J164 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.71e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
epithelial tube open at both ends | 8.14e-09 | 59 |
blood vessel | 8.14e-09 | 59 |
blood vasculature | 8.14e-09 | 59 |
vascular cord | 8.14e-09 | 59 |
splanchnic layer of lateral plate mesoderm | 1.71e-08 | 83 |
vasculature | 2.67e-08 | 78 |
vascular system | 2.67e-08 | 78 |
vessel | 3.60e-08 | 68 |
epithelial tube | 1.80e-07 | 117 |
cardiovascular system | 3.06e-07 | 109 |
simple squamous epithelium | 3.78e-07 | 22 |
circulatory system | 8.65e-07 | 112 |
systemic artery | 8.91e-07 | 33 |
systemic arterial system | 8.91e-07 | 33 |