FFCP PHASE1:Hg19::chr6:107078354..107078388,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84816 | |EntrezGene=84816 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=18647 | |HGNC=18647 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc003prk.2_5end | |association_with_transcript=0bp_to_uc003prk.2_5end | ||
|cluster_id=chr6:107078354..107078388,- | |||
|coexpression_cluster_id=C442 | |coexpression_cluster_id=C442 | ||
|description=CAGE_peak_4_at_RTN4IP1_5end | |description=CAGE_peak_4_at_RTN4IP1_5end | ||
|id=chr6:107078354..107078388,- | |id=chr6:107078354..107078388,- | ||
|ontology_enrichment_celltype=CL:0000945!4.18e-16!24;CL:0000826!4.18e-16!24;CL:0000542!2.42e-10!53;CL:0000051!2.42e-10!53;CL:0000838!1.64e-09!52 | |ontology_enrichment_celltype=CL:0000945!4.18e-16!24;CL:0000826!4.18e-16!24;CL:0000542!2.42e-10!53;CL:0000051!2.42e-10!53;CL:0000838!1.64e-09!52 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.88e-47;24!CL:0000785;9.81e-20;1!CL:0000819;9.81e-20;1!CL:0000236;3.41e-13;13!CL:0000542;4.60e-13;53!CL:0002166;2.63e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.01e-47,24;CL:0000826,2.01e-47,24;CL:0000542,5.85e-27,53;CL:0000051,5.85e-27,53;CL:0000838,9.57e-22,52;CL:0000819,1.08e-19,1;CL:0000236,2.53e-12,14;CL:0002087,4.86e-12,115;CL:0000785,1.57e-10,2;CL:0000955,1.57e-10,2;CL:0000818,1.57e-10,2;CL:0000954,1.57e-10,2;CL:0000816,1.57e-10,2;CL:0000738,4.24e-10,136;CL:0002031,4.38e-09,120;CL:0002032,1.95e-08,161;CL:0000837,1.95e-08,161;CL:0000037,4.65e-08,168;CL:0000988,1.29e-07,177;CL:0000817,1.93e-07,3;CL:0002166,2.05e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;4.60e-13;53!CL:0000954;1.50e-10;2 | |||
|ontology_enrichment_disease=DOID:162!1.49e-09!235;DOID:14566!2.04e-09!239;DOID:2531!5.98e-09!51;DOID:0060083!5.98e-09!51;DOID:305!3.76e-08!106 | |ontology_enrichment_disease=DOID:162!1.49e-09!235;DOID:14566!2.04e-09!239;DOID:2531!5.98e-09!51;DOID:0060083!5.98e-09!51;DOID:305!3.76e-08!106 | ||
|ontology_enrichment_disease_v019=DOID:0060073;9.81e-20;1!DOID:8675;9.81e-20;1!DOID:630;2.71e-19;1!DOID:0050177;2.71e-19;1!DOID:12603;2.71e-19;1!DOID:0050427;2.71e-19;1!DOID:2355;2.71e-19;1!DOID:0060058;4.46e-17;10!DOID:74;2.48e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,1.08e-19,1;DOID:8675,1.08e-19,1;DOID:2355,2.25e-19,1;DOID:12603,2.71e-19,1;DOID:630,3.91e-19,1;DOID:0050177,3.91e-19,1;DOID:0050427,3.91e-19,1;DOID:0060058,4.23e-17,10;DOID:74,2.27e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001557!7.73e-08!19;UBERON:0001737!2.77e-07!9 | |ontology_enrichment_uberon=UBERON:0001557!7.73e-08!19;UBERON:0001737!2.77e-07!9 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,1.55991119954897,1.18066171970519,0,0,0.154816123316076,0.919421224478927,0,0,0.852139206383318,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0.800791974072025,1.72425731986345,1.32208974556972,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.222820913770347,0.294605907474837,0,0,0,0.260118695119756,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0,0.174129737299267,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0,0.330881918197182,0.217879444092406,0.237270619111097,0.539325232640658,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,1.87467667973554,0.335964256397719,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,1.48642540100575,0.432807638929335,0.284567373393656,0,0,0.5745161103971,0.211673582723883,0,0.280797178113459,0.684704037099577,0.47003968731907,0,0,0,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0.251932747854276,0,0.246169610922139,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0.359030577639089,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0.19606253431774,0,0,0,0,0.163232808159148,0,0,0,0.265372693510018,1.22206028986725,0,0.247127877893006,0.417687798021821,0,0,0,5.10873409803865,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0.0967563312890851,0.146178634172371,0.164230914106418,0,0,0,0,0,0,0.195551382734803,0,0.426905989478705,0.19980960958213,0,0,0,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0.13480708770837,0.0984274815147488,1.52411997718412,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0.335434687599266,0.630445658393585,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,5.60245952552121,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0.438568099157414,0,0,0,0,0.345430341731199,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0.47317047000752,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.490738592505128,0.11796972334774,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.222462803784138,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.223710863595585,0.098150233615243,0.975343399858155,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0.231522474323834,0.218559560503957,0.940634592723046,0,0,0,0,0,0,0.281951753939561,0.128915775947154,0.199882311849858,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0.437062287854782,0,0.101988829741982,0,0,0,0.530450887527676,0.535928260312357,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.336760265072938,0.0717222053926763,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0.402547587182052,1.28227396921293 | |phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,1.55991119954897,1.18066171970519,0,0,0.154816123316076,0.919421224478927,0,0,0.852139206383318,0.568676929949686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.853460445133014,0.800791974072025,1.72425731986345,1.32208974556972,0,0,0.587237189370939,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.222820913770347,0.294605907474837,0,0,0,0.260118695119756,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0,0.174129737299267,0,0,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354920400119532,0.337169380156203,0,0.330881918197182,0.217879444092406,0.237270619111097,0.539325232640658,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,1.87467667973554,0.335964256397719,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0,0,0,0.165284915360978,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,1.48642540100575,0.432807638929335,0.284567373393656,0,0,0.5745161103971,0.211673582723883,0,0.280797178113459,0.684704037099577,0.47003968731907,0,0,0,0,0,0,0.307240764308458,0,0,0,0.278406173895242,0,0.270455678475983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0.251932747854276,0,0.246169610922139,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0.359030577639089,0,0,0,0,0,0.156980256395025,0.166211681900156,0,0.19606253431774,0,0,0,0,0.163232808159148,0,0,0,0.265372693510018,1.22206028986725,0,0.247127877893006,0.417687798021821,0,0,0,5.10873409803865,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0.0967563312890851,0.146178634172371,0.164230914106418,0,0,0,0,0,0,0.195551382734803,0,0.426905989478705,0.19980960958213,0,0,0,0.14405479798815,0,0,0.135904206073614,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0.0671834724867263,0,0,0.0787831823072236,0,0.13480708770837,0.0984274815147488,1.52411997718412,0,0.136203406111576,0,0.137539436597234,0,0,0,0,0.335434687599266,0.630445658393585,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0,0,0,0.410462603746695,0,0,0,0,0.387848869084652,0,0,0,0,0,0,0,0,5.60245952552121,0,0,0,0,0,0,0,0,0.1251909307065,0,0,0,0,0,0.303298235083296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0.231522474323834,0,0,0,0.438568099157414,0,0,0,0,0.345430341731199,0,0.138258436151731,0,0,0.163565394255844,0,0,0,0,0.106691729694141,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0.47317047000752,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0.490738592505128,0.11796972334774,0,0.231051332300676,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0.0679697329768317,0,0,0.222462803784138,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0.223710863595585,0.098150233615243,0.975343399858155,0,0,0,0,0,0.198950775161368,0,0,0,0.150962843566674,0.231522474323834,0.218559560503957,0.940634592723046,0,0,0,0,0,0,0.281951753939561,0.128915775947154,0.199882311849858,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0.437062287854782,0,0.101988829741982,0,0,0,0.530450887527676,0.535928260312357,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.336760265072938,0.0717222053926763,0,0.0814032686109745,0.106727345877715,0,0,0,0,0,0,0.402547587182052,1.28227396921293 | ||
|short_description=p4@RTN4IP1 | |short_description=p4@RTN4IP1 | ||
}} | }} |
Latest revision as of 15:54, 19 September 2015
Short description: | p4@RTN4IP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RTN4IP1_5end |
Coexpression cluster: | C442_diffuse_xeroderma_lymphoma_Burkitt_plasma_b_lymphangiectasia |
Association with transcript: | 0bp_to_uc003prk.2_5end |
EntrezGene: | RTN4IP1 |
HGNC: | 18647 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.01e-47 | 24 |
pro-B cell | 2.01e-47 | 24 |
lymphocyte | 5.85e-27 | 53 |
common lymphoid progenitor | 5.85e-27 | 53 |
lymphoid lineage restricted progenitor cell | 9.57e-22 | 52 |
B-1 B cell | 1.08e-19 | 1 |
B cell | 2.53e-12 | 14 |
nongranular leukocyte | 4.86e-12 | 115 |
mature B cell | 1.57e-10 | 2 |
pre-B-II cell | 1.57e-10 | 2 |
transitional stage B cell | 1.57e-10 | 2 |
small pre-B-II cell | 1.57e-10 | 2 |
immature B cell | 1.57e-10 | 2 |
leukocyte | 4.24e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 4.38e-09 | 120 |
hematopoietic oligopotent progenitor cell | 1.95e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.95e-08 | 161 |
hematopoietic stem cell | 4.65e-08 | 168 |
hematopoietic cell | 1.29e-07 | 177 |
precursor B cell | 1.93e-07 | 3 |
epithelial cell of Malassez | 2.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 1.08e-19 | 1 |
lymphosarcoma | 1.08e-19 | 1 |
anemia | 2.25e-19 | 1 |
acute leukemia | 2.71e-19 | 1 |
genetic disease | 3.91e-19 | 1 |
monogenic disease | 3.91e-19 | 1 |
xeroderma pigmentosum | 3.91e-19 | 1 |
lymphoma | 4.23e-17 | 10 |
hematopoietic system disease | 2.27e-10 | 2 |