FFCP PHASE1:Hg19::chr3:1134339..1134350,+: Difference between revisions
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|id=chr3:1134339..1134350,+
|short_description=p5@CNTN6
|description=CAGE_peak_5_at_CNTN6_5end
|association_with_transcript=0bp_to_ENST00000350110,ENST00000397479,E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27255 | |EntrezGene=27255 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2176 | |HGNC=2176 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQ52,F8VWS7,F5H752 | |UniProt=Q9UQ52,F8VWS7,F5H752 | ||
|association_with_transcript=0bp_to_ENST00000350110,ENST00000397479,ENST00000539053_5end | |||
|cluster_id=chr3:1134339..1134350,+ | |||
|coexpression_cluster_id=C38 | |||
|description=CAGE_peak_5_at_CNTN6_5end | |||
|id=chr3:1134339..1134350,+ | |||
|ontology_enrichment_celltype=CL:0000064!5.12e-12!3;CL:0005012!5.12e-12!3;CL:0000067!5.12e-12!3;CL:0002304!5.12e-12!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.48e-84;3!UBERON:0000358;1.78e-29;1!UBERON:0006241;1.14e-10;3!UBERON:0003057;1.14e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;7.48e-30;1!DOID:4549;7.48e-30;1!DOID:5861;7.48e-30;1!DOID:6496;7.48e-30;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,7.48e-30,1;DOID:4549,7.48e-30,1;DOID:5861,7.48e-30,1;DOID:6496,7.48e-30,1 | |||
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| ||
|short_description=p5@CNTN6 | |||
}} | }} |
Latest revision as of 15:58, 19 September 2015
Short description: | p5@CNTN6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CNTN6_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | 0bp_to_ENST00000350110, ENST00000397479, ENST00000539053_5end |
EntrezGene: | CNTN6 |
HGNC: | 2176 |
UniProt: | Q9UQ52F8VWS7F5H752 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cerebellum | 6.48e-43 | 6 |
rhombic lip | 6.48e-43 | 6 |
posterior neural tube | 1.78e-30 | 15 |
chordal neural plate | 1.78e-30 | 15 |
regional part of metencephalon | 6.20e-29 | 9 |
metencephalon | 6.20e-29 | 9 |
future metencephalon | 6.20e-29 | 9 |
segmental subdivision of hindbrain | 6.33e-22 | 12 |
hindbrain | 6.33e-22 | 12 |
presumptive hindbrain | 6.33e-22 | 12 |
segmental subdivision of nervous system | 2.64e-20 | 13 |
cartilage tissue | 6.73e-11 | 3 |
skeletal tissue | 6.73e-11 | 3 |
spinal cord | 1.20e-10 | 3 |
dorsal region element | 1.20e-10 | 3 |
dorsum | 1.20e-10 | 3 |
neural tube | 2.02e-08 | 56 |
neural rod | 2.02e-08 | 56 |
future spinal cord | 2.02e-08 | 56 |
neural keel | 2.02e-08 | 56 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 7.48e-30 | 1 |
extraosseous chondrosarcoma | 7.48e-30 | 1 |
myxoid chondrosarcoma | 7.48e-30 | 1 |
extraskeletal myxoid chondrosarcoma | 7.48e-30 | 1 |