FFCP PHASE1:Hg19::chr1:8938709..8938720,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:8938709..8938720,- to FFCP PHASE1:Hg19::chr1:8938709..8938720,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2023 | |EntrezGene=2023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3350 | |HGNC=3350 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_ENST00000464594_5end | |||
|cluster_id=chr1:8938709..8938720,- | |||
|coexpression_cluster_id=C4004 | |||
|description=CAGE_peak_3_at_ENO1_5end | |||
|id=chr1:8938709..8938720,- | |||
|ontology_enrichment_celltype=CL:0000012!3.64e-43!682;CL:0000548!1.55e-42!679;CL:0000004!1.55e-42!679;CL:0000255!1.55e-42!679;CL:0000003!3.45e-33!722;CL:0000144!1.63e-28!625;CL:0002371!6.41e-25!591;CL:0000063!1.17e-18!578;CL:0000066!4.77e-18!254;CL:0000055!9.43e-17!180;CL:0000220!1.66e-16!246;CL:0002321!2.06e-16!248;CL:0000222!6.78e-16!119;CL:0000680!1.81e-10!57;CL:0000056!1.81e-10!57;CL:0000355!1.81e-10!57;CL:0000359!2.04e-10!32;CL:0000183!3.81e-10!59;CL:0000187!1.52e-09!54;CL:0000192!2.13e-09!42;CL:0000514!2.13e-09!42;CL:0000393!2.22e-08!60;CL:0000211!2.22e-08!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;9.06e-10;32!CL:0000192;3.98e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.66e-18,253;CL:0002321,1.32e-16,250;CL:0000222,4.88e-16,121;CL:0000359,2.04e-10,32;CL:0000680,3.15e-10,58;CL:0000056,3.15e-10,58;CL:0000355,3.15e-10,58;CL:0000187,2.59e-09,55;CL:0000192,4.05e-09,43;CL:0000514,4.05e-09,43;CL:0000393,3.42e-08,61;CL:0000211,3.42e-08,61 | |||
|ontology_enrichment_development_v019=CL:0000514;3.98e-07;43 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.88e-08,239;DOID:162,8.61e-08,235 | |||
|ontology_enrichment_uberon=UBERON:0001637!6.16e-14!42;UBERON:0003509!6.16e-14!42;UBERON:0004572!6.16e-14!42;UBERON:0000055!1.81e-13!69;UBERON:0002049!2.13e-13!79;UBERON:0007798!2.13e-13!79;UBERON:0001981!1.40e-12!60;UBERON:0007500!1.40e-12!60;UBERON:0004537!1.40e-12!60;UBERON:0006965!1.40e-12!60;UBERON:0003914!4.78e-12!118;UBERON:0004872!3.36e-10!84;UBERON:0000490!4.31e-10!138;UBERON:0000486!5.63e-10!82;UBERON:0004573!5.88e-10!33;UBERON:0004571!5.88e-10!33;UBERON:0004290!3.13e-09!70;UBERON:0004535!2.43e-08!110;UBERON:0000914!2.88e-08!83;UBERON:0002329!2.88e-08!83;UBERON:0003077!2.88e-08!83;UBERON:0003059!2.88e-08!83;UBERON:0007282!2.88e-08!83;UBERON:0009618!2.88e-08!83;UBERON:0007285!2.88e-08!83;UBERON:0002100!2.91e-08!216;UBERON:0001134!6.29e-08!61;UBERON:0002036!6.29e-08!61;UBERON:0003082!6.29e-08!61;UBERON:0005256!1.01e-07!143;UBERON:0000487!1.18e-07!22;UBERON:0003104!3.22e-07!238;UBERON:0009142!3.22e-07!238;UBERON:0001009!3.89e-07!113;UBERON:0001737!5.92e-07!9;UBERON:0002385!6.88e-07!63;UBERON:0001015!6.88e-07!63;UBERON:0000383!6.88e-07!63;UBERON:0006914!8.89e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.53e-10;42!UBERON:0003509;5.53e-10;42!UBERON:0004572;5.53e-10;42!UBERON:0007500;1.77e-09;56!UBERON:0001981;1.77e-09;56!UBERON:0004537;1.77e-09;56!UBERON:0004573;5.62e-09;33!UBERON:0004571;5.62e-09;33!UBERON:0003914;7.08e-09;74!UBERON:0000055;8.08e-08;65!UBERON:0000487;1.11e-07;22!UBERON:0000025;3.80e-07;93!UBERON:0001737;5.91e-07;9!UBERON:0001557;5.91e-07;9!UBERON:0006914;8.37e-07;25!UBERON:0002049;8.98e-07;75!UBERON:0007798;8.98e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,6.16e-14,42;UBERON:0003509,6.16e-14,42;UBERON:0004572,6.16e-14,42;UBERON:0000055,9.59e-14,68;UBERON:0002049,1.21e-13,78;UBERON:0007798,1.21e-13,78;UBERON:0007500,7.15e-13,59;UBERON:0001981,7.15e-13,59;UBERON:0004537,7.15e-13,59;UBERON:0006965,7.15e-13,59;UBERON:0003914,3.33e-12,117;UBERON:0000490,2.85e-11,148;UBERON:0004872,2.20e-10,83;UBERON:0007503,2.78e-10,78;UBERON:0004573,5.88e-10,33;UBERON:0004571,5.88e-10,33;UBERON:0000486,8.40e-10,83;UBERON:0002100,3.01e-09,199;UBERON:0002329,4.77e-09,71;UBERON:0003059,4.77e-09,71;UBERON:0007282,4.77e-09,71;UBERON:0004290,4.77e-09,71;UBERON:0009618,4.77e-09,71;UBERON:0003077,1.14e-08,72;UBERON:0007285,1.14e-08,72;UBERON:0007524,1.75e-08,73;UBERON:0004535,1.82e-08,109;UBERON:0001134,9.47e-08,62;UBERON:0002036,9.47e-08,62;UBERON:0003082,9.47e-08,62;UBERON:0000487,1.18e-07,22;UBERON:0001009,3.03e-07,112;UBERON:0001737,5.92e-07,9;UBERON:0006914,8.89e-07,25;UBERON:0002385,9.76e-07,64;UBERON:0001015,9.76e-07,64;UBERON:0000383,9.76e-07,64;UBERON:0003104,9.86e-07,160;UBERON:0009142,9.86e-07,160 | |||
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143.294116059545 | ||
|short_description=p3@ENO1 | |||
}} | }} |
Latest revision as of 16:06, 19 September 2015
Short description: | p3@ENO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENO1_5end |
Coexpression cluster: | C4004_Alveolar_Smooth_Renal_Tracheal_Keratinocyte_Bronchial_Esophageal |
Association with transcript: | 8bp_to_ENST00000464594_5end |
EntrezGene: | ENO1 |
HGNC: | 3350 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.66e-18 | 253 |
embryonic cell | 1.32e-16 | 250 |
mesodermal cell | 4.88e-16 | 121 |
vascular associated smooth muscle cell | 2.04e-10 | 32 |
muscle precursor cell | 3.15e-10 | 58 |
myoblast | 3.15e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.15e-10 | 58 |
muscle cell | 2.59e-09 | 55 |
smooth muscle cell | 4.05e-09 | 43 |
smooth muscle myoblast | 4.05e-09 | 43 |
electrically responsive cell | 3.42e-08 | 61 |
electrically active cell | 3.42e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.88e-08 | 239 |
cancer | 8.61e-08 | 235 |