FFCP PHASE1:Hg19::chr5:108744993..108745023,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9867 | |EntrezGene=9867 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17481 | |HGNC=17481 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000511624,ENST00000512822_5end | |association_with_transcript=0bp_to_ENST00000511624,ENST00000512822_5end | ||
|cluster_id=chr5:108744993..108745023,- | |||
|description=CAGE_peak_6_at_PJA2_5end | |description=CAGE_peak_6_at_PJA2_5end | ||
|id=chr5:108744993..108745023,- | |id=chr5:108744993..108745023,- | ||
|ontology_enrichment_celltype=CL:0000037!8.78e-19!172;CL:0000566!8.78e-19!172;CL:0000988!8.76e-17!182;CL:0000542!1.59e-16!53;CL:0000051!1.59e-16!53;CL:0002087!1.74e-16!119;CL:0002032!2.56e-16!165;CL:0000837!2.56e-16!165;CL:0000838!4.10e-16!52;CL:0000738!4.94e-16!140;CL:0002031!1.50e-15!124;CL:0000084!1.45e-14!25;CL:0000827!1.45e-14!25;CL:0000791!2.65e-11!18;CL:0000789!2.65e-11!18;CL:0002420!2.65e-11!18;CL:0002419!2.65e-11!18;CL:0000790!2.65e-11!18;CL:0000625!4.77e-07!11 | |ontology_enrichment_celltype=CL:0000037!8.78e-19!172;CL:0000566!8.78e-19!172;CL:0000988!8.76e-17!182;CL:0000542!1.59e-16!53;CL:0000051!1.59e-16!53;CL:0002087!1.74e-16!119;CL:0002032!2.56e-16!165;CL:0000837!2.56e-16!165;CL:0000838!4.10e-16!52;CL:0000738!4.94e-16!140;CL:0002031!1.50e-15!124;CL:0000084!1.45e-14!25;CL:0000827!1.45e-14!25;CL:0000791!2.65e-11!18;CL:0000789!2.65e-11!18;CL:0002420!2.65e-11!18;CL:0002419!2.65e-11!18;CL:0000790!2.65e-11!18;CL:0000625!4.77e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;5.85e-24;25!CL:0000791;1.72e-18;18!CL:0000789;1.72e-18;18!CL:0002419;1.72e-18;18!CL:0000542;1.41e-14;53!CL:0000625;4.03e-11;11!CL:0000624;3.42e-08;6 | |ontology_enrichment_celltype_v019=CL:0000084;5.85e-24;25!CL:0000791;1.72e-18;18!CL:0000789;1.72e-18;18!CL:0002419;1.72e-18;18!CL:0000542;1.41e-14;53!CL:0000625;4.03e-11;11!CL:0000624;3.42e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.35e-28,53;CL:0000051,4.35e-28,53;CL:0000838,2.28e-27,52;CL:0000084,3.52e-24,25;CL:0000827,3.52e-24,25;CL:0000738,4.12e-19,136;CL:0000791,1.71e-18,18;CL:0000789,1.71e-18,18;CL:0002420,1.71e-18,18;CL:0002419,1.71e-18,18;CL:0000790,1.71e-18,18;CL:0000988,7.25e-18,177;CL:0000037,7.66e-18,168;CL:0002087,2.72e-17,115;CL:0002031,1.38e-14,120;CL:0002032,1.59e-14,161;CL:0000837,1.59e-14,161;CL:0000625,4.14e-11,11;CL:0000624,3.52e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;1.72e-18;18!CL:0000051;1.41e-14;53 | |ontology_enrichment_development_v019=CL:0000790;1.72e-18;18!CL:0000051;1.41e-14;53 | ||
|ontology_enrichment_disease=DOID:2531!2.93e-08!51;DOID:0060083!2.93e-08!51 | |ontology_enrichment_disease=DOID:2531!2.93e-08!51;DOID:0060083!2.93e-08!51 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.72e-09!102;UBERON:0003061!2.72e-09!102;UBERON:0002193!4.90e-08!112;UBERON:0003080!5.35e-07!42;UBERON:0001869!6.84e-07!32;UBERON:0001893!6.88e-07!34;UBERON:0002780!7.07e-07!41;UBERON:0001890!7.07e-07!41;UBERON:0006240!7.07e-07!41 | |ontology_enrichment_uberon=UBERON:0002390!2.72e-09!102;UBERON:0003061!2.72e-09!102;UBERON:0002193!4.90e-08!112;UBERON:0003080!5.35e-07!42;UBERON:0001869!6.84e-07!32;UBERON:0001893!6.88e-07!34;UBERON:0002780!7.07e-07!41;UBERON:0001890!7.07e-07!41;UBERON:0006240!7.07e-07!41 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.67e-10;15!UBERON:0000179;8.67e-10;15!UBERON:0000463;8.67e-10;15!UBERON:0002390;9.23e-10;32!UBERON:0001869;2.61e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0000178;8.67e-10;15!UBERON:0000179;8.67e-10;15!UBERON:0000463;8.67e-10;15!UBERON:0002390;9.23e-10;32!UBERON:0001869;2.61e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.20e-09,15;UBERON:0000179,1.20e-09,15;UBERON:0000463,1.20e-09,15;UBERON:0001869,1.95e-08,32;UBERON:0002780,7.77e-08,41;UBERON:0001890,7.77e-08,41;UBERON:0003080,7.77e-08,41;UBERON:0006240,7.77e-08,41;UBERON:0001893,1.27e-07,34;UBERON:0001017,1.67e-07,81;UBERON:0002791,2.80e-07,32;UBERON:0001016,4.54e-07,89 | |||
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|phase1_expression=0.54503513781167,0,2.25527046553554,1.0007329835313,0.893922188854576,0,0,1.89515962028049,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0.286235987131057,1.36874425072884,0.251085279189606,2.29240217243854,1.64201178899891,1.96776953284198,0,1.53531759238885,1.23852898652861,0,0,0,0.542270404062111,0.426507697462265,1.17440175733939,0.553995408531877,1.20326668482085,2.38711957787437,1.56740831967947,0.647787332037959,0.77272670290256,0.872389432677388,0.755751887377619,0,0.232429036905685,0.822335776043652,0,0,0.256160706529101,0.236482229888585,1.37898272294647,1.29096936716765,0,0.941211697713023,0.272906150057846,0.449446968890169,0.612167784741805,1.28371610830437,0.639337125799041,0,0.598390972864896,0,0.290209238628584,0.56738522469114,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0.736555271975129,0.632924774881769,0.211255286311942,0.637812899895131,0.419317291016752,0.786300418025466,1.20141514273205,0.64290234678832,0.285012743741249,1.19350006319454,0.365328307529268,0,0,0,1.28019066769952,4.00395987036012,0,0.661044872784862,0,1.70763890732835,1.76171156811282,1.52909291250092,0,0.560508562981536,1.05353633910031,4.52432471261816,6.28817220398664,5.55124047298675,2.34061093546949,3.91106719960308,4.73447805734733,1.94826728407911,4.79064964606246,4.12448270464772,2.65840673500345,3.24964636518019,3.71464827204458,2.60118695119756,2.30213066445147,1.65810010671509,3.47763702882063,6.07974908964448,4.0131124213457,5.22677619024884,4.64568305060021,3.44898444241729,3.77990190030893,4.04831507231205,2.86708872891687,1.30216690771284,2.85135613334512,4.36667845325541,5.11946444617674,1.24930726552346,1.89421801635213,4.10563998460523,5.44338206706778,2.13952156626806,3.04131248153878,2.43806866313962,1.34140171940727,0.255725123687061,1.44575660953827,0,0.434539556882471,0.795285947051099,0.486634870302636,0.283604451492204,0.221729397462564,0.087834785693126,0.392937226493138,0,0,1.62273696827342,0.522389211897802,2.26028532882071,1.90792499444274,1.14398982156026,1.11437250398869,0,0,0,0,0,0,0.208994966536811,0,0.35576626268671,0.33472061276467,0.402829317109147,0.760272105718513,0,0,0,0.0892997282840798,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0.496971951695318,0.506522046658319,0.926864265692532,0.286836620748814,1.41867352879343,1.12135520028461,0,0,1.24484414159907,0,0,0,0,0.234321431833797,0,0,0.298897361103602,0.352303495931295,0,0.140450806702248,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0.250237039743928,0.277064115484183,0.877955241761676,0,0.150238058906597,0.340296549480063,0,0,0.211931901159562,0.600182192168805,0.412210116953756,1.28820270022815,0.744467425326359,0.675105328965065,0.487185025805993,0.252433774244115,0.460249493211497,0.323292113637624,1.06502877754984,0.201504196455281,0.169560592310488,0,0.272746120590835,0,0,0.265059536642971,0,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,0,0,0.354920400119532,0.168584690078102,0,0.441175890929576,0.217879444092406,0.237270619111097,0.404493924480493,0.784885860501384,0,0,0,0,0,0,0,0,3.5317047953172,0.245976877086227,0.343135620597051,0.439001141634502,0,0.100528972411631,0,0,0,0,0.34779121492523,0,0,0.462985512576611,0.570762456703795,0,0,3.69325509131096,3.27605971194933,2.22946743433092,0.93733833986777,0.16798212819886,0.992425680696705,0.358234090811393,0.581267877027924,0,4.43396914106349,0.44024217006613,1.03664057770386,1.29707958075265,0.25248486685276,0.126995788584338,0,0,0,0.102827492703324,0.600686115687835,0,0,0,0.2933531432838,0.646358578788889,0,0,0,0,0.514414748524284,1.41849132023278,0.266422179016099,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,0.602878754119172,0,0.099972991182057,0,0,0,0,0,0,0.579125226670317,0,0.537182889719687,2.57795831185113,4.3346767244424,4.9594342217689,6.41715181398742,8.63921722356376,7.8083912314573,1.54657762555539,0.335032530668698,1.27587750330633,7.49007023947182,0,4.55857064779639,0.24538298343828,0,0.271265023699736,0.207970861530807,0.535286966391485,0.157702415033935,0.234282829985426,0,0,1.03473071292505,1.32845119707087,0.921845842708516,0.347534457872331,0,0,2.68798433959754,4.74571241800957,3.09509917629989,0,0,0.604780586659361,0.248107807818777,0.153461973288062,0,0.384417447767103,0,0.482561763430822,0,0.616838775210622,0.532685175939381,2.46381468041427,1.55776328755086,0.813472649219715,0,0.200506470303285,0.0920809889358963,0.459257792658427,0.182091168006717,0,0.451199612907412,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0.657779629937804,0.784306353074702,0,0,0,0.412164046590889,0.457847324091717,0.82509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0,0.429680979473094,0.145016693914229,0.426133137080504,0.445160178233687,0.165284915360978,0.192190067365106,0,0,0.464845549297286,1.25924938732256,0,0.616067160352178,1.06461206063404,0,0.37064843820784,0.429374660225974,0,0.316379424718726,0,0.255897791311334,0,0,0,1.07923474549989,0.274537029736055,0.235624804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| ||
|short_description=p6@PJA2 | |short_description=p6@PJA2 | ||
}} | }} |
Latest revision as of 16:09, 19 September 2015
Short description: | p6@PJA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PJA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000511624, ENST00000512822_5end |
EntrezGene: | PJA2 |
HGNC: | 17481 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.35e-28 | 53 |
common lymphoid progenitor | 4.35e-28 | 53 |
lymphoid lineage restricted progenitor cell | 2.28e-27 | 52 |
T cell | 3.52e-24 | 25 |
pro-T cell | 3.52e-24 | 25 |
leukocyte | 4.12e-19 | 136 |
mature alpha-beta T cell | 1.71e-18 | 18 |
alpha-beta T cell | 1.71e-18 | 18 |
immature T cell | 1.71e-18 | 18 |
mature T cell | 1.71e-18 | 18 |
immature alpha-beta T cell | 1.71e-18 | 18 |
hematopoietic cell | 7.25e-18 | 177 |
hematopoietic stem cell | 7.66e-18 | 168 |
nongranular leukocyte | 2.72e-17 | 115 |
hematopoietic lineage restricted progenitor cell | 1.38e-14 | 120 |
hematopoietic oligopotent progenitor cell | 1.59e-14 | 161 |
hematopoietic multipotent progenitor cell | 1.59e-14 | 161 |
CD8-positive, alpha-beta T cell | 4.14e-11 | 11 |
CD4-positive, alpha-beta T cell | 3.52e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 1.20e-09 | 15 |
haemolymphatic fluid | 1.20e-09 | 15 |
organism substance | 1.20e-09 | 15 |
cerebral hemisphere | 1.95e-08 | 32 |
regional part of forebrain | 7.77e-08 | 41 |
forebrain | 7.77e-08 | 41 |
anterior neural tube | 7.77e-08 | 41 |
future forebrain | 7.77e-08 | 41 |
telencephalon | 1.27e-07 | 34 |
central nervous system | 1.67e-07 | 81 |
regional part of telencephalon | 2.80e-07 | 32 |
nervous system | 4.54e-07 | 89 |