FFCP PHASE1:Hg19::chr3:77089602..77089618,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6092 | |EntrezGene=6092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10250 | |HGNC=10250 | ||
|TSSclassifier=strong | |||
|UniProt=F8W703,F8WBR3 | |UniProt=F8W703,F8WBR3 | ||
|association_with_transcript=-262bp_to_ENST00000332191,ENST00000473767_5end | |association_with_transcript=-262bp_to_ENST00000332191,ENST00000473767_5end | ||
|cluster_id=chr3:77089602..77089618,+ | |||
|coexpression_cluster_id=C24 | |coexpression_cluster_id=C24 | ||
|description=CAGE_peak_12_at_ROBO2_5end | |description=CAGE_peak_12_at_ROBO2_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;9.26e-10;6!CL:0000404;9.26e-10;6!CL:0000047;7.52e-08;2 | |ontology_enrichment_celltype_v019=CL:0000540;9.26e-10;6!CL:0000404;9.26e-10;6!CL:0000047;7.52e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.20e-15,8;CL:0000540,8.48e-10,6;CL:0000031,8.48e-10,6;CL:0000404,8.48e-10,6 | |||
|ontology_enrichment_development_v019=CL:0000031;9.26e-10;6 | |ontology_enrichment_development_v019=CL:0000031;9.26e-10;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!4.47e-32!41;UBERON:0001890!4.47e-32!41;UBERON:0006240!4.47e-32!41;UBERON:0001017!5.38e-32!82;UBERON:0005743!1.24e-31!86;UBERON:0003080!3.88e-31!42;UBERON:0001049!5.06e-31!57;UBERON:0005068!5.06e-31!57;UBERON:0006241!5.06e-31!57;UBERON:0007135!5.06e-31!57;UBERON:0000073!1.40e-27!94;UBERON:0001016!1.40e-27!94;UBERON:0002346!2.71e-26!90;UBERON:0002616!2.40e-25!59;UBERON:0001893!3.00e-25!34;UBERON:0001869!1.54e-24!32;UBERON:0002791!1.30e-23!33;UBERON:0000955!2.67e-23!69;UBERON:0006238!2.67e-23!69;UBERON:0003075!5.43e-23!86;UBERON:0007284!5.43e-23!86;UBERON:0002020!9.21e-23!34;UBERON:0003528!9.21e-23!34;UBERON:0003056!2.60e-22!61;UBERON:0007023!1.64e-21!115;UBERON:0002619!2.87e-18!22;UBERON:0000924!3.81e-18!173;UBERON:0006601!3.81e-18!173;UBERON:0000153!5.53e-18!129;UBERON:0007811!5.53e-18!129;UBERON:0001950!1.78e-17!20;UBERON:0000033!5.89e-16!123;UBERON:0004121!8.35e-16!169;UBERON:0000956!1.08e-15!25;UBERON:0000203!1.08e-15!25;UBERON:0002420!7.47e-12!9;UBERON:0007245!7.47e-12!9;UBERON:0010009!7.47e-12!9;UBERON:0010011!7.47e-12!9;UBERON:0000454!7.47e-12!9;UBERON:0009663!2.17e-11!7;UBERON:0000369!1.72e-09!4;UBERON:0002435!1.72e-09!4;UBERON:0000204!1.72e-09!4;UBERON:0010082!1.72e-09!4;UBERON:0002308!1.14e-08!9;UBERON:0000125!1.14e-08!9;UBERON:0001894!2.41e-08!7;UBERON:0006222!2.41e-08!7;UBERON:0001872!8.14e-08!5;UBERON:0005383!2.20e-07!3;UBERON:0005382!2.20e-07!3;UBERON:0000475!2.39e-07!365;UBERON:0000025!4.40e-07!194;UBERON:0001871!8.79e-07!7 | |ontology_enrichment_uberon=UBERON:0002780!4.47e-32!41;UBERON:0001890!4.47e-32!41;UBERON:0006240!4.47e-32!41;UBERON:0001017!5.38e-32!82;UBERON:0005743!1.24e-31!86;UBERON:0003080!3.88e-31!42;UBERON:0001049!5.06e-31!57;UBERON:0005068!5.06e-31!57;UBERON:0006241!5.06e-31!57;UBERON:0007135!5.06e-31!57;UBERON:0000073!1.40e-27!94;UBERON:0001016!1.40e-27!94;UBERON:0002346!2.71e-26!90;UBERON:0002616!2.40e-25!59;UBERON:0001893!3.00e-25!34;UBERON:0001869!1.54e-24!32;UBERON:0002791!1.30e-23!33;UBERON:0000955!2.67e-23!69;UBERON:0006238!2.67e-23!69;UBERON:0003075!5.43e-23!86;UBERON:0007284!5.43e-23!86;UBERON:0002020!9.21e-23!34;UBERON:0003528!9.21e-23!34;UBERON:0003056!2.60e-22!61;UBERON:0007023!1.64e-21!115;UBERON:0002619!2.87e-18!22;UBERON:0000924!3.81e-18!173;UBERON:0006601!3.81e-18!173;UBERON:0000153!5.53e-18!129;UBERON:0007811!5.53e-18!129;UBERON:0001950!1.78e-17!20;UBERON:0000033!5.89e-16!123;UBERON:0004121!8.35e-16!169;UBERON:0000956!1.08e-15!25;UBERON:0000203!1.08e-15!25;UBERON:0002420!7.47e-12!9;UBERON:0007245!7.47e-12!9;UBERON:0010009!7.47e-12!9;UBERON:0010011!7.47e-12!9;UBERON:0000454!7.47e-12!9;UBERON:0009663!2.17e-11!7;UBERON:0000369!1.72e-09!4;UBERON:0002435!1.72e-09!4;UBERON:0000204!1.72e-09!4;UBERON:0010082!1.72e-09!4;UBERON:0002308!1.14e-08!9;UBERON:0000125!1.14e-08!9;UBERON:0001894!2.41e-08!7;UBERON:0006222!2.41e-08!7;UBERON:0001872!8.14e-08!5;UBERON:0005383!2.20e-07!3;UBERON:0005382!2.20e-07!3;UBERON:0000475!2.39e-07!365;UBERON:0000025!4.40e-07!194;UBERON:0001871!8.79e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;3.14e-28;2!UBERON:0002757;3.14e-28;2!UBERON:0010134;3.14e-28;2!UBERON:0005408;3.14e-28;2!UBERON:0001899;3.14e-28;2!UBERON:0003296;1.23e-14;4!UBERON:0010133;1.23e-14;4!UBERON:0002784;1.23e-14;4!UBERON:0007029;2.11e-14;1!UBERON:0000945;1.35e-11;5!UBERON:0010039;1.35e-11;5!UBERON:0000922;1.62e-10;49!UBERON:0001894;9.33e-09;7 | |ontology_enrichment_uberon_v019=UBERON:0001905;3.14e-28;2!UBERON:0002757;3.14e-28;2!UBERON:0010134;3.14e-28;2!UBERON:0005408;3.14e-28;2!UBERON:0001899;3.14e-28;2!UBERON:0003296;1.23e-14;4!UBERON:0010133;1.23e-14;4!UBERON:0002784;1.23e-14;4!UBERON:0007029;2.11e-14;1!UBERON:0000945;1.35e-11;5!UBERON:0010039;1.35e-11;5!UBERON:0000922;1.62e-10;49!UBERON:0001894;9.33e-09;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.14e-28,2;UBERON:0002757,3.14e-28,2;UBERON:0010134,3.14e-28,2;UBERON:0005408,3.14e-28,2;UBERON:0001899,3.14e-28,2;UBERON:0003296,1.23e-14,4;UBERON:0010133,1.23e-14,4;UBERON:0002784,1.23e-14,4;UBERON:0007029,2.41e-14,1;UBERON:0001017,1.65e-09,81;UBERON:0001894,9.33e-09,7;UBERON:0006222,9.33e-09,7;UBERON:0001016,1.68e-08,89;UBERON:0011216,2.12e-08,223;UBERON:0000945,1.45e-07,8;UBERON:0010039,1.45e-07,8 | |||
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| ||
|short_description=p12@ROBO2 | |short_description=p12@ROBO2 | ||
}} | }} |
Latest revision as of 16:11, 19 September 2015
Short description: | p12@ROBO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_ROBO2_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | -262bp_to_ENST00000332191, ENST00000473767_5end |
EntrezGene: | ROBO2 |
HGNC: | 10250 |
UniProt: | F8W703F8WBR3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.20e-15 | 8 |
neuron | 8.48e-10 | 6 |
neuroblast | 8.48e-10 | 6 |
electrically signaling cell | 8.48e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.14e-28 | 2 |
regional part of epithalamus | 3.14e-28 | 2 |
secretory circumventricular organ | 3.14e-28 | 2 |
circumventricular organ | 3.14e-28 | 2 |
epithalamus | 3.14e-28 | 2 |
gland of diencephalon | 1.23e-14 | 4 |
neuroendocrine gland | 1.23e-14 | 4 |
regional part of diencephalon | 1.23e-14 | 4 |
surface | 2.41e-14 | 1 |
central nervous system | 1.65e-09 | 81 |
diencephalon | 9.33e-09 | 7 |
future diencephalon | 9.33e-09 | 7 |
nervous system | 1.68e-08 | 89 |
organ system subdivision | 2.12e-08 | 223 |
stomach | 1.45e-07 | 8 |
food storage organ | 1.45e-07 | 8 |